GENSCAN 1.0	Date run:  4-Nov-116	Time: 11:16:38

Sequence gi568815592r:170435223_170653242 : 218020 bp : 43.06% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   1378   1373    6                               1.05
 1.03 Term -   2913   2765  149  1  2   84   47    66 0.415   0.16
 1.02 Intr -   3585   3400  186  1  0   79   70   104 0.466   7.36
 1.01 Init -   4447   4195  253  1  1   75   50    83 0.210   0.70
 1.00 Prom -   8629   8590   40                              -5.86

 2.00 Prom +  10848  10887   40                              -4.26
 2.01 Init +  14750  14987  238  1  1   89   45   238 0.895  15.77
 2.02 Intr +  26988  27165  178  1  1   40  115   192 0.703  16.08
 2.03 Intr +  27842  28032  191  2  2   58   81    42 0.286  -0.27
 2.04 Intr +  29622  29702   81  1  0   68  113   113 0.563  11.41
 2.05 Term +  33889  34139  251  2  2  -20   53   181 0.160  -0.33
 2.06 PlyA +  36020  36025    6                               1.05

 3.05 PlyA -  37480  37475    6                               1.05
 3.04 Term -  38433  38116  318  0  0   40   42   147 0.020   0.18
 3.03 Intr -  43784  43405  380  0  2  -67   74   334 0.380  11.18
 3.02 Intr -  49797  49708   90  1  0  104   95    39 0.393   6.17
 3.01 Init -  63607  63472  136  1  1  101   47    86 0.578   4.13
 3.00 Prom -  91386  91347   40                              -3.56

 4.08 PlyA -  91615  91610    6                               1.05
 4.07 Term - 100183  99998  186  1  0   80   39   172 0.997   8.99
 4.06 Intr - 102118 102012  107  2  2   80   95    68 0.998   6.63
 4.05 Intr - 108508 108379  130  1  1   69   70   124 0.594   8.97
 4.04 Intr - 110962 110881   82  0  1   73   71    52 0.383   1.64
 4.03 Intr - 113891 113784  108  1  0   80   87    90 0.357   7.50
 4.02 Intr - 118004 117908   97  0  1   54   60    39 0.013  -3.23
 4.01 Init - 120166 119965  202  1  1   47  108    79 0.069   4.84
 4.00 Prom - 120680 120641   40                              -7.36

 5.00 Prom + 121104 121143   40                              -8.46
 5.01 Init + 121808 121861   54  1  0   78   90    15 0.695   2.23
 5.02 Intr + 126569 127011  443  1  2  132   73   491 0.172  44.25
 5.03 Intr + 129323 129410   88  2  1   66   72    69 0.296   3.07
 5.04 Intr + 131696 131787   92  1  2   85   53    46 0.285  -0.41
 5.05 Intr + 134390 134557  168  2  0  107   97    26 0.469   4.46
 5.06 Intr + 136188 136282   95  0  2   92  111   -45 0.742  -2.19
 5.07 Term + 136964 137043   80  0  2  111   39    81 0.832   3.43
 5.08 PlyA + 137612 137617    6                               1.05

 6.08 PlyA - 138088 138083    6                               1.05
 6.07 Term - 142495 142337  159  1  0  101   43   156 0.964  10.34
 6.06 Intr - 143748 143635  114  0  0   54   80    39 0.559   0.34
 6.05 Intr - 144883 144780  104  2  2   86  103    39 0.998   5.09
 6.04 Intr - 147966 147835  132  1  0  108   94   105 0.997  13.72
 6.03 Intr - 149447 149077  371  1  2   63   83   400 0.468  31.75
 6.02 Intr - 153680 153553  128  2  2   99  103    -8 0.659   1.28
 6.01 Init - 159489 159292  198  0  0   55   79   122 0.557   6.90
 6.00 Prom - 162934 162895   40                              -4.06

 7.00 Prom + 166271 166310   40                              -5.56
 7.01 Init + 174665 174814  150  1  0   89   80    80 0.480   7.43
 7.02 Intr + 191345 191575  231  1  0   83   60    90 0.033   3.67
 7.03 Term + 204624 204782  159  2  0   53   47   216 0.186  11.94
 7.04 PlyA + 205273 205278    6                               1.05

 8.02 PlyA - 205649 205644    6                               1.05
 8.01 Sngl - 213481 213122  360  1  0   70   38   159 0.535   5.17

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 117926 118111  186  1  0   52   45   200 0.872   9.59
S.002 Sngl - 196901 196713  189  2  0   72   42   161 0.819   5.01


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:170435223_170653242|GENSCAN_predicted_peptide_1|195_aa
MNGLLQLPLSAPQLKLKTQELPLGSGISSNHPSAIAVHPRSLPEQLSRTSSWDCGPWTAL
LTANCSPCVLITPGLQNGGTDVHCPSSPPPSLLIPSPQASASPTQPHSRAQIKVKPEQQM
FVEPPPIKGFVARVTGTLHQLCEQMVNLVFPAFGLAPQNEVPNLSTITSMRIAQGERILV
ITSLIASMIAATAFH

>gi568815592r:170435223_170653242|GENSCAN_predicted_CDS_1|588_bp
atgaacgggctgctgcagcttccattatcagctcctcaactcaagctaaaaactcaggaa
ctccctctggggtctgggatcagcagcaaccacccctccgcaattgcagtgcaccctagg
tcccttccggagcaactgagcagaacgtcttcctgggactgtggtccatggacggccctg
ctaacagctaattgcagcccatgtgtcctcatcacaccaggtctccaaaacgggggcaca
gatgtccactgcccctccagcccaccccccagcctgctgatccccagcccccaggcctca
gcatcccccacccagccccattccagagcacagataaaagtgaaacctgagcagcaaatg
tttgtggagccgccgccaatcaagggcttcgttgccagggtaaccgggacacttcatcag
ctctgtgaacagatggtcaaccttgtattccctgcatttggtttggcccctcagaatgag
gtccccaatctctccaccatcaccagcatgaggatagctcagggagaaaggatattggtg
attacatcgttgattgccagcatgattgcagcaactgcctttcactga

>gi568815592r:170435223_170653242|GENSCAN_predicted_peptide_2|312_aa
MVGKGLRSGSLVVRAGLRTGSGSLVVRAGLRTGSGSLVVRAGLRTGSGSNSSSVLFSKSL
SEPQFLQPARRAYNRIGVAAKLVTRRLPCGEDQADKMETTIQQVVRPQPQSPRLLKTVKA
RSPGQPPPSTSLQLVVATRLRARRAPLTTRGSTWSIGQVWNGDLHIGRVWNGDLHIGRVW
NGGLQSANIAKHLATHTLWCGDEDGNSHLLVVEGAQGVEDCVGCGIICKDKTIRLRGEPA
DHLVQCSSQGATESPVCSETADVLWPQGATESPVCSETTDVLWPQGATESPVCSETTDVL
WPQGAHGISRVL

>gi568815592r:170435223_170653242|GENSCAN_predicted_CDS_2|939_bp
atggtggggaagggcctccgctcagggtcgctcgtggtcagggccggcctgcggaccggc
tcggggtcgctcgtggtcagggccggcctgcggaccggatcggggtcgctcgtggtcagg
gccggcctgcggaccggctcgggctctaattccagctcggtgctcttcagcaagtcactc
tctgagcctcagtttcttcagccagcaagaagagcttacaataggattggggtggcagca
aagctggtcacccgacggctgccctgtggagaggaccaggcagacaaaatggaaaccacc
atccagcaggtggtccggccacagccccagtcaccgagactcctgaagacggtcaaggcc
aggagcccaggccagcccccaccttccacctccctgcagctggttgtggccacaaggctc
agagctcgccgggcacccctcacaaccagggggtccacctggagcatcgggcaggtttgg
aacggtgacctccacatcgggcgtgtttggaacggtgacctccacatcgggcgtgtttgg
aacggaggcctccaatcagcgaacattgcaaagcacctagccacgcacacactctggtgt
ggggatgaggacgggaattcacacctgctggtggtggagggggcccaaggtgtggaggac
tgtgttggctgcggcatcatctgcaaagacaagaccatcagactcagaggagaacctgca
gaccatctggtccagtgttctagccagggggccacagaatctcccgtgtgctctgagacc
gctgacgtgctatggcctcagggggccacggaatctcccgtgtgctctgagaccactgac
gtgctctggcctcagggggccacggaatctcccgtgtgctctgagaccactgacgtgctc
tggcctcagggggcccacggaatctcccgtgtgctctga

>gi568815592r:170435223_170653242|GENSCAN_predicted_peptide_3|307_aa
MQWVLPALLPPSFCSRMLAVGYPNSTPQPYSHALGLHMSKRVFRLAHLPSIIKGHGNATL
AKCCCLDLGLPGLRNGSENRWGSLYSSSHPNTVKGLTPVHLDTVKGLTPVHPDAVKGLTP
VPPDAVKGLTPVPPDAVKGLTPVPPDAVKGLTPVPPDAVKGLTPVPPDAVKGLTPVPPDA
VKGLTPVHPDAVKGLTPVPPGGQLLYVRHSARCRNRAELVAGSCGCSWRKGGLNIGWKKS
YEEPGKEPVKFNCEHQSLGRQRDKMGQLAEEQHLCPWQCEHLSVSSCLWWKPAGSLYLLA
VGGDTQH

>gi568815592r:170435223_170653242|GENSCAN_predicted_CDS_3|924_bp
atgcagtgggtcctgcctgctttgctacccccttcattctgttcacgcatgttagctgtg
ggctaccccaactccactccccagccttacagccatgccctgggcctccacatgtccaag
agggtcttcagactagcccatctgccttctatcattaaaggacacggcaacgcgaccctc
gccaaatgctgttgcctggatcttggactccctggcctccgtaatggctctgagaaccgc
tggggaagtctgtacagctccagtcatcccaatactgtgaagggcctcacccctgttcat
ctcgacactgtgaagggcctcacccctgttcatcccgacgctgtgaagggcctcacccct
gttcctcccgacgctgtgaagggcctcacccctgttcctcccgacgctgtgaagggcctc
acccctgttcctcccgacgctgtgaagggcctcacccctgttcctcccgacgctgtgaag
ggcctcacccctgttcctcccgacgctgtgaagggcctcacccctgttcctcccgacgct
gtgaagggcctcacccctgttcatcccgacgctgtgaagggcctcacccctgttcctcct
ggtgggcaactgctgtacgtcaggcattctgccaggtgcagaaacagagctgagctcgtg
gccgggtcctgtggttgctcctggaggaaagggggcctgaatattggatggaaaaagtct
tatgaggagcctggaaaagaacctgtcaagttcaactgtgagcaccagagcctgggcagg
cagagagacaagatggggcagctggcagaggagcagcatctctgcccttggcagtgtgag
catctgtctgtcagcagctgcctctggtggaagcctgcaggcagcttgtacctcctggca
gtgggaggagacacccagcactaa

>gi568815592r:170435223_170653242|GENSCAN_predicted_peptide_4|303_aa
MEFRKCSMNRSNLARLDEFERSKTGGRKFRFRNLRLRQEIMTAGFKAIISMIRDLSRTFG
GFRPLFATMYSAPGRDLGMEPHRAAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLS
EGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAA
MLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLD
NQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSL
RKD

>gi568815592r:170435223_170653242|GENSCAN_predicted_CDS_4|912_bp
atggaatttcggaagtgcagtatgaacagatctaatttggcaagactagatgaatttgag
aggagtaaaactggaggacggaagtttcgtttcaggaatctaaggttgaggcaagagata
atgacggcaggatttaaagccattataagtatgattagagatttatccaggaccttcggt
ggcttcaggccactttttgcaaccatgtattcggctcctggcagagacttggggatggaa
ccgcacagagccgcgggccctttgcagctgcgattttcgccctacgttttcaacggaggt
actatactggcaattgctggagaagattttgcaattgttgcttctgatactcgattgagt
gaagggttttcaattcatacgcgggatagccccaaatgttacaaattaacagacaaaaca
gtcattggatgcagcggttttcatggagactgtcttacgctgacaaagattattgaagca
agactaaagatgtataagcattccaataataaggccatgactacgggggcaattgctgca
atgctgtctacaatcctgtattcaaggcgcttctttccatactatgtttacaacatcatc
ggtggacttgatgaagaaggaaagggggctgtatacagctttgatccagtagggtcttac
cagagagactccttcaaggctggaggctcagcaagtgccatgctacagcccctgcttgac
aaccaggttggttttaagaacatgcagaatgtggagcatgttccgctgtccttggacaga
gccatgcggctggtgaaagatgtcttcatttctgcggctgagagagatgtgtacactggg
gacgcactccggatctgcatagtgaccaaagagggcatcagggaggaaactgtttcctta
aggaaggactga

>gi568815592r:170435223_170653242|GENSCAN_predicted_peptide_5|339_aa
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQAPQ
LFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDL
KTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARV
VQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRI
VLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKTT

>gi568815592r:170435223_170653242|GENSCAN_predicted_CDS_5|1020_bp
atggatcagaacaacagcctgccaccttacgctcagggcttggcctcccctcagggtgcc
atgactcccggaatccctatctttagtccaatgatgccttatggcactggactgacccca
cagcctattcagaacaccaatagtctgtctattttggaagagcaacaaaggcagcagcag
caacaacaacagcagcagcagcagcagcagcagcaacagcaacagcagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcaacaggcagtggcagctgca
gccgttcagcagtcaacgtcccagcaggcaacacagggaacctcaggccaggcaccacag
ctcttccactcacagactctcacaactgcacccttgccgggcaccactccactgtatccc
tcccccatgactcccatgacccccatcactcctgccacgccagcttcggagagttctggg
attgtaccgcagctgcaaaatattgtatccacagtgaatcttggttgtaaacttgaccta
aagaccattgcacttcgtgcccgaaacgccgaatataatcccaagcggtttgctgcggta
atcatgaggataagagagccacgaaccacggcactgattttcagttctgggaaaatggtg
tgcacaggagccaagagtgaagaacagtccagactggcagcaagaaaatatgctagagtt
gtacagaagttgggttttccagctaagttcttggacttcaagattcagaatatggtgggg
agctgtgatgtgaagtttcctataaggttagaaggccttgtgctcacccaccaacaattt
agtagttatgagccagagttatttcctggtttaatctacagaatgatcaaacccagaatt
gttctccttatttttgtttctggaaaagttgtattaacaggtgctaaagtcagagcagaa
atttatgaagcatttgaaaacatctaccctattctaaagggattcaggaagacgacgtaa

>gi568815592r:170435223_170653242|GENSCAN_predicted_peptide_6|401_aa
MSQMLRKRFQEDPEDPLVAAISRLMLRRTPTVTSNTHQTQPPTWGQIKKLSQLAEENLRK
AGQPVTDTIGETGCLPMLLLDLRSQLNPLGKTVLITLSTQLLYRVPDLWCPPLAFRPGAR
FPPSDPAVGCAPRQPAPRMAAAGARPVELGFAESAPAWRLRSEQFPSKVGGRPAWLGAAG
LPGPQALACELCGRPLSFLLQVYAPLPGRPDAFHRCIFLFCCREQPCCAGLRDHLDHIIP
DHNFLFPEFEIVIETEDEIMPEVVEKEDYSEIIGSMGEALEEELDSMAKHESREDKIFQK
FKTQIALEPEQILRYGRGIAPIWISGENIPQEKDIPDCPCGAKRILEFQVMPQLLNYLKA
DRLGKSIDWGILAVFTCAESCSLGTGYTEEFVWKQDVTDTP

>gi568815592r:170435223_170653242|GENSCAN_predicted_CDS_6|1206_bp
atgagccagatgctgaggaagagattccaggaggatcctgaggaccccctggttgcagcc
atctcaagactgatgctgaggaggaccccaactgtcacgagcaacacccatcaaacacag
ccacccacttggggacagatcaagaagctgtcacagttggcagaagaaaacctgaggaaa
gcaggacaaccagtcacagacacaattggggaaactggttgtttaccaatgcttttactt
gacttacggagccaattaaacccccttggaaaaaccgtcctcataactttgtctacacag
ctcctgtacagggttcctgacctgtggtgcccgcctcttgccttccggcccggcgcccga
tttccgccttccgacccagctgtgggctgcgccccacgccagcccgcgccccgcatggct
gccgccggggccaggcctgtggagctgggcttcgccgagtcggcgccggcgtggcgactg
cgcagcgagcagttccccagcaaggtgggcgggcggccggcatggctgggcgcggccggg
ctgccggggccccaggccctggcctgcgagctgtgcggccgcccgctctccttcctgctg
caggtgtatgcgccgctgcctggccgcccggacgccttccaccgctgcatcttcctcttc
tgctgccgcgagcagccgtgctgtgccggcctgcgagatcatctggaccatataattcca
gaccacaacttcctttttccagaatttgaaattgtaatagaaacagaagatgagattatg
cctgaggttgtggaaaaggaagattactcagagattatagggagcatgggtgaagcactt
gaggaagaactggattccatggcaaaacatgaatccagggaagataaaatttttcagaag
tttaaaactcagatagcccttgaaccagaacagattcttagatatggcagaggtattgcc
cccatctggatttctggtgaaaatattcctcaagaaaaggatattccagattgcccctgt
ggtgccaagagaatattggaattccaggtcatgcctcagctcctaaactacctgaaggct
gacagactgggcaagagcattgactggggcatcctggctgtcttcacctgtgctgagagc
tgcagcttgggtactggctatacagaagaatttgtgtggaagcaggatgtaacagataca
ccgtaa

>gi568815592r:170435223_170653242|GENSCAN_predicted_peptide_7|179_aa
MKFHDRGQIQPKPSPAEAVNSAPQREPEGSILRAADPLVWAAKAMSASRAPRDLVLCVPA
APATAKRGQGTAQAMASEGASLKLWQLPCGVEPVDSQKSRIEVWEPPPRFQRMYGNAWIS
RQKFAAGMIYDLFRKRKVISFGGCIAQIFFIHVIGGVEMVLLIAMAFDSYVALLSPSTI

>gi568815592r:170435223_170653242|GENSCAN_predicted_CDS_7|540_bp
atgaagtttcatgacagaggccaaatccagcccaaacccagcccagcagaggctgtcaac
tcagcgccccagcgagagccggaaggttccatcctcagagctgcagaccctctcgtgtgg
gctgcaaaggccatgtctgcatcccgggcgcctagggacttggtgctctgtgtcccagct
gctccagccacagctaaaaggggtcaaggtacagctcaggccatggcttcagagggtgca
agcctcaagctttggcagcttccatgtggtgttgagcctgtggattcacagaagtccaga
atcgaggtatgggaacctccacctagatttcagagaatgtatggaaatgcctggatctcc
agacagaagtttgctgcagggatgatttatgacctgttcagaaagcgcaaagtcatctcc
tttggaggctgcatcgctcaaatcttcttcatccacgtcattggtggtgtggagatggtg
ctgctcatagccatggcctttgacagttatgtggccctattaagcccctccactatctga

>gi568815592r:170435223_170653242|GENSCAN_predicted_peptide_8|119_aa
MRTSCSMHKDQALIRSSGRKISETEYQLNEINQEDKIREKRMKRNEQSLQEIWDYVKRPN
LRLIAVPESDGENGTKLENTLWDIIQENFPNLARQANIQIQKYGEHHKDTPQEKQPQDT

>gi568815592r:170435223_170653242|GENSCAN_predicted_CDS_8|360_bp
atgagaacttcatgcagcatgcacaaggatcaagcactgattcggtcaagcggaagaaag
atatcagagactgaatatcaacttaatgaaataaatcaagaagacaagattagagaaaaa
agaatgaaaagaaatgaacaaagcctccaagaaatatgggactatgtgaaacgaccaaat
ctacgtttgattgctgtacctgaaagtgatggggagaatggaaccaagttagaaaacact
ctttgggatattatccaggagaacttccctaacctagcaaggcaggccaatattcaaatt
cagaaatatggagaacatcacaaagacactcctcaagaaaagcaaccccaagacacatag