GENSCAN 1.0	Date run:  4-Nov-116	Time: 11:23:54

Sequence gi568815592f:12190630_12396064 : 205435 bp : 40.78% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -    143    138    6                               1.05
 1.07 Term -  26993  26874  120  2  0   45   54   106 0.469   0.39
 1.06 Intr -  27720  27522  199  2  1    5   49   111 0.211  -2.67
 1.05 Intr -  32618  32226  393  1  0   42   87   200 0.321   8.14
 1.04 Intr -  43308  43164  145  1  1   87   63   109 0.365   6.72
 1.03 Intr -  59289  59247   43  0  1   99   97    46 0.008   3.49
 1.02 Intr -  63913  63633  281  2  2   56  100   148 0.002   9.07
 1.01 Init -  77546  77516   31  2  1   53   91    37 0.095   0.49
 1.00 Prom -  78515  78476   40                              -5.85

 2.00 Prom +  82813  82852   40                              -8.25
 2.01 Init +  88827  88911   85  2  1   67   55    81 0.691   3.73
 2.02 Intr +  91897  92000  104  2  2   88  106    -1 0.586   0.67
 2.03 Intr +  93859  94177  319  0  1    5   65   172 0.409   1.21
 2.04 Intr +  98006  98185  180  0  0   77   31   106 0.457   2.72
 2.05 Intr + 101712 101880  169  1  1  118   91    73 0.814   8.68
 2.06 Intr + 103312 103467  156  1  0   52   99    51 0.629   0.80
 2.07 Intr + 103551 103775  225  0  0   86  110   147 0.870  12.88
 2.08 Intr + 105561 105781  221  0  2    9   24   173 0.132   0.02
 2.09 Intr + 109499 109612  114  0  0   52   96    51 0.192   1.80
 2.10 Intr + 109700 109766   67  0  1  101   74    50 0.094   1.94
 2.11 Intr + 115355 115448   94  2  1   84   89    52 0.144   3.95
 2.12 Intr + 122079 122133   55  2  1  109   93    25 0.306   2.73
 2.13 Term + 123992 124140  149  0  2   66   47   152 0.565   5.98
 2.14 PlyA + 124551 124556    6                               1.05

 3.00 Prom + 124588 124627   40                              -6.45
 3.01 Init + 135338 135417   80  1  2   86   60    71 0.156   4.68
 3.02 Intr + 138990 139173  184  0  1   67   62   114 0.170   5.57
 3.03 Intr + 141066 141094   29  2  2   33  106    37 0.154  -4.00
 3.04 Intr + 143904 143977   74  0  2  119   77    59 0.358   6.03
 3.05 Term + 149230 149540  311  2  2   80   43   162 0.502   5.14
 3.06 PlyA + 151409 151414    6                               1.05

 4.07 PlyA - 151431 151426    6                              -0.45
 4.06 Term - 153531 153325  207  0  0   81   55   135 0.695   5.86
 4.05 Intr - 168795 168748   48  0  0   71   83    45 0.048   0.26
 4.04 Intr - 174890 174648  243  2  0   57   54   140 0.108   4.27
 4.03 Intr - 183249 182995  255  0  0   12   86   157 0.072   4.62
 4.02 Intr - 193156 192920  237  1  0   24   93   191 0.820  10.09
 4.01 Intr - 196013 195915   99  2  0   64  111    64 0.260   5.69

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:12190630_12396064|GENSCAN_predicted_peptide_1|403_aa
MGYRMDVVLADLCPGDMVHSFMGFTIWCGLQTYQQAVIIKWKGTMIGEVQGSIGTLRIGT
RPDLAEWRVRKGLQGEVVSKLNRNWPGKGRRKKSGYQAEGNTLKVSVVLAVSGVWREKAL
CKLLSNLHLCCVVVLQFLYYSGSHEQQFKEYREEERKKGVLGTSTPSLFVVLGAAPTGSQ
DCGCSAKYHVLPRTKAGTGRNLSLKIGEENLFSRNLHIPLPRIGCHSSAELQTHQECDYL
RFSDSTVGGNQCRESVAFDREPQQMPELYFITAINSTHTHVIHTERAQPRKTPRTRPNYG
ADESFRRWTVDREARSVPRGTQTFRGQEGKEDPEKETEKKPQWGGKGRERITGKVPWKPS
EENQVGRQRVTGSRLTDQEVGRHESSPRVAFYSIVKEGETVII

>gi568815592f:12190630_12396064|GENSCAN_predicted_CDS_1|1212_bp
atgggctacagaatggatgttgtgttagcagatctttgtcctggggatatggtccacagc
tttatggggtttacaatctggtgtggactccagacatatcaacaggctgttataatcaag
tggaaaggtactatgataggggaagttcaaggttctattggaacactcagaataggaact
cgaccagatttggcagagtggagagtgaggaaaggtttacaaggagaagtggtgtctaaa
ctcaataggaattggccaggcaaagggagacggaagaagagcgggtaccaggcagaggga
aacaccctcaaggtgagcgtggttctggcagtctctggtgtctggagagaaaaagcatta
tgtaaactcctgtcaaacctacacttgtgctgtgtggttgtcctccaatttctgtattac
tcaggctcccatgagcagcagttcaaggagtacagggaggaggagcggaagaagggtgtt
cttgggacatcaaccccaagcctcttcgtggtccttggtgctgctcccacaggttcacaa
gactgtggttgcagtgccaagtatcacgtgctccctcgaacgaaggcagggaccggaaga
aacctctctttgaaaattggggaagaaaacctgttttccagaaaccttcacattcctttg
cccaggattgggtgccattcctctgctgagctacaaacacaccaggaatgtgattatctg
agattttcagattctacagtgggaggcaaccagtgccgagaaagcgtggctttcgatagg
gaaccacagcaaatgccagagctgtattttatcacagccataaactccacacacactcat
gtcatccacacagagcgagcacagcctcggaaaacacccagaacaagaccaaactatggg
gcagatgagagcttcaggcggtggactgtagatcgagaagcgaggtctgtacctaggggt
actcaaacatttagaggccaggaaggaaaagaagatccagaaaaggaaacagagaagaag
ccgcagtggggaggcaaaggcagggagaggataacaggaaaagtgccttggaagcctagt
gaagaaaatcaggtgggacggcagagggtcaccggcagcaggctgactgatcaggaggtg
ggaagacatgaaagttctcctcgggttgctttttatagtattgtaaaagaaggggaaacg
gtcatcatttga

>gi568815592f:12190630_12396064|GENSCAN_predicted_peptide_2|645_aa
MDDKGKSQPRQELELALKHMGSWQDAVRGRREVENGARAPGLILSPLPPPPSSSPPLPSS
SLKSENLSKKEGRKEGKKEGRKEGRKEGKASKQASRKERKKEKERKEREKERKERKRKGE
RKREKERKKERKKGKEERKKERKEGRKEGRKKERKKERKKERKKERNHEVALLEDACHYG
PVAATVPVPPAVTSREVWGSESVQTHGFAVGIKTVLLILEGGGKKGFPASVLGAELSAVG
ENGGEKPTPSPPWRLRRSKRCSCSSLMDKECVYFCHLDIIWVNTPEHVVPYGLGSPRSKR
ALENLLPTKATDRENRCQCASQKDKKCWNFCQAGKELRETNRDIESQGKAEYNIAEMFFL
VYFNRAEDIMEKDWNNHKKGKDCSKLGKKCIYQQLVRGRKIRRSSEEHLRQTRTSVLVQN
IPRKVKEFPQPSSLASISGNCFGLFFHLGMTMDLSAETHSHIRIRVASSGERERKEIPHR
GGVSDEAFHILSLIRPLPSHNNPFGKLEPYHVSISQPRKETYREEPRGYTGPATWTNVDY
FQLVSELACLTLAFHRLLSGPGSAFPGRNWAHEWSATVAFEMPLSHRRMAFLQGSAEISR
KRKSIRNDWPVCKQFLVVADCLLQLGEFDSWNARTEVAFFSPPEV

>gi568815592f:12190630_12396064|GENSCAN_predicted_CDS_2|1938_bp
atggatgataaaggaaagtctcagccaagacaggagctggagctagctctgaaacacatg
ggaagctggcaggatgcggtcagaggaagaagggaggttgagaatggggccagggctcca
ggcctgatcctttctcctcttcctcctcctccttcttcctctcctcctcttccttcttct
tctttaaaaagtgagaatttgtctaaaaaggaaggaaggaaggaaggaaagaaggaagga
aggaaagaaggaaggaaggaaggaaaagcaagcaagcaagcaagcaggaaagaaagaaag
aaagagaaagaaaggaaagaaagagagaaagaaaggaaagaaagaaaaagaaagggagaa
agaaaaagagagaaagaaagaaagaaagagagaaagaaaggaaaggaagaaagaaagaag
gaaaggaaggaaggaaggaaggaaggaaggaagaaagaaagaaagaaagaaagaaagaaa
gaaagaaagaaagaaagaaaccatgaagtggctcttttagaggatgcatgtcattatgga
cctgtcgctgccactgtccctgttcccccagctgtgacttcgagggaggtctggggatct
gagtctgtccaaacccacggctttgctgttgggataaaaactgtccttttgattttagaa
ggaggagggaaaaaaggtttcccagcatcagtcttaggcgctgagctcagcgcggtgggt
gagaacggcggggagaaacccactcccagtccaccctggcggctccgccggtccaagcgc
tgctcctgctcgtccctgatggataaagagtgtgtctacttctgccacctggacatcatt
tgggtcaacactcccgagcacgttgttccgtatggacttggaagccctaggtccaagaga
gccttggagaatttacttcccacaaaggcaacagaccgtgaaaatagatgccaatgtgct
agccaaaaagacaagaagtgctggaatttttgccaagcaggaaaagaactcagagagact
aacagagacattgaaagtcagggtaaagctgaatataacattgctgaaatgtttttcctt
gtgtattttaacagggctgaagacattatggagaaagactggaataatcataagaaagga
aaagactgttccaagcttgggaaaaagtgtatttatcagcagttagtgagaggaagaaaa
atcagaagaagttcagaggaacacctaagacaaaccaggaccagcgtcctcgttcaaaac
attccaagaaaggttaaggagttcccccaaccatcttcactggcttccatcagtggtaac
tgctttggtctcttctttcatctggggatgacaatggacctctcagcagaaacacacagt
cacattcgaattcgggtggcatcctccggagagagagagaggaaggagattccacacagg
ggtggagtttctgacgaagcttttcacatcctttctctcattcgacccctaccctcacac
aacaatcctttcgggaagctggaaccatatcatgtatccatcagccaaccaaggaaagag
acatatcgagaggagccaaggggatacactggacctgcaacttggactaacgtagattat
ttccagcttgtgagtgaactggcatgtctgactctagcattccacaggcttcttagtggc
ccaggcagtgcctttccagggagaaactgggcccatgaatggtctgctacagtggctttt
gaaatgccactttctcatagaagaatggcttttcttcaaggttctgctgaaatatccagg
aaaagaaagagcatcaggaatgactggcctgtgtgcaagcaattccttgttgttgctgac
tgccttctgcagcttggcgaatttgactcttggaatgcacggacagaagtagcatttttc
tctccaccagaagtctga

>gi568815592f:12190630_12396064|GENSCAN_predicted_peptide_3|225_aa
MERQDPQSQEVSTVLGTLITPPGEYCRILHKGVSEERVGLASSLGLYNWTLENGIPSQGH
PGKACVCTLTHEACPSSCAVVLRRLPVQETKQPVTVPGKLCSFFKRQLKSSFVHDQAFPD
ALASSMGASHTGWTLTLGKIKGSSGHQFILIISQLFGFVWVGKERTVLLEVPPKHCLSGS
GAGEAGRLDVVPPGPFASGVALMPDLFVYLADGKEEFHWVINCLH

>gi568815592f:12190630_12396064|GENSCAN_predicted_CDS_3|678_bp
atggagagacaagatccccaatcccaagaagtttccactgtccttggaacactgataact
ccccctggagaatactgcagaattcttcataagggagtcagtgaggagagggtgggtctg
gcctcttccctgggtctgtataattggactctggaaaatggaattccaagccaagggcat
cctgggaaggcttgtgtgtgcacactcacccatgaggcctgcccgtcctcctgtgctgtg
gtgctcagacggcttcctgtgcaggaaaccaagcagccagtcacagttcctggcaaactc
tgttccttctttaagcgccaactcaaaagctcttttgtgcatgatcaagcctttcctgat
gcccttgcctcctcaatgggagcctcacacactggctggacactgacactcgggaagatc
aaaggttcatcaggacaccagttcattctgattatttctcaactgtttgggtttgtctgg
gtggggaaagaaaggacagttctgcttgaggtgccaccaaaacactgcctgagtggcagt
ggagccggggaggctgggcggctggatgtggtcccaccgggaccgttcgccagtggtgtc
gctctgatgcctgatttatttgtgtatttggcagatgggaaggaggagttccactgggtg
ataaattgcctgcactga

>gi568815592f:12190630_12396064|GENSCAN_predicted_peptide_4|362_aa
AVVIQETSRLNISVQGVAVVILEDRLVDKLNKQLNLRNDSDLNKPVKGARKGTVRQDGDT
DDQEDDIIQTCISAAKFGHRNWRQKGNWRLGGEPLSPNSQGDPAATCPVHSLFMLPVGKD
PEHLKNSSEGKPTTPKHNPLPVANSTSLPVSSELICFFPAVTIGSTATLFPDSLKLYLEI
TIKLYFGRCLPADSQQKEFQRNKSKEAAHPFQPPPRRHFCFEIPPTGSTGEVSPEQSASI
PFLLNSHGEVRRLREPALQRNLQRLTNADNKCPEEQRNKSRLFRSSAEIKASTENCSSLI
LHNKQVAQQVARCPRAVQRPGPKYTRMGCLFALNRTACVKPEPCLLKDFGYLRFLVLDQE
PD

>gi568815592f:12190630_12396064|GENSCAN_predicted_CDS_4|1089_bp
gctgttgtgattcaggaaacttctagactaaatatatctgttcagggggttgctgtggtt
attctggaagataggctagtggacaaacttaataaacagctcaacctgagaaatgactct
gatctgaataaaccggtaaaaggagcccgcaagggaactgtcagacaggacggtgacact
gatgaccaggaagatgacataattcagacttgcatttcagctgccaaatttggacacaga
aactggagacagaaaggaaactggaggctgggtggagagccactgagccctaactcccag
ggtgacccagctgccacctgcccagttcacagcctgttcatgctgccagtggggaaagac
cctgaacatctgaaaaattccagtgaagggaaacctactaccccgaagcacaatccactg
cctgttgcaaactctacctccttgcctgtttcctcagagttaatctgcttctttccagca
gttactattggatctactgccactctctttccagacagtcttaaactgtatttggagata
actataaaactgtattttggcagatgtcttcctgctgacagccagcaaaaggaattccag
agaaacaaaagcaaggaggccgctcaccccttccagcccccacccagaaggcatttttgc
tttgagattccacctacaggctccactggtgaagtttccccggagcagagtgcctccatt
ccgttcctacttaacagtcatggtgaggttagaaggttaagggagcctgccctgcagaga
aatttgcaaagattaactaatgcagacaacaagtgtccggaagagcagagaaataaaagt
agattgttcaggtcttcagcagagattaaagcctcaacggagaattgttcttccctaatt
ctccacaacaagcaggttgcacaacaggtggcaaggtgcccccgggcagtccagagacct
ggtccaaaatatacacgaatgggctgtttatttgctctaaacaggacagcctgtgtgaaa
cctgaaccttgtctcctaaaggattttggctacttgaggttcctggtgttagatcaggag
ccagactga