GENSCAN 1.0	Date run:  4-Nov-116	Time: 11:38:44

Sequence gi568815593r:176292777_176516363 : 223587 bp : 45.77% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2254   2495  242  0  2  100   -5   171 0.282   5.35
 1.02 Intr +   3475   3544   70  1  1   77   77   106 0.259   7.58
 1.03 Intr +  20915  21069  155  1  2  118  115   112 0.947  15.77
 1.04 Intr +  29497  29649  153  1  0  110   59   118 0.986  10.29
 1.05 Intr +  31853  31981  129  2  0   75  105    84 0.956   8.61
 1.06 Intr +  43944  44100  157  0  1  126   88    19 0.958   5.71
 1.07 Intr +  44286  44370   85  2  1   53   94     6 0.279  -2.91
 1.08 Term +  52407  52669  263  1  2  111   55   279 0.984  22.59
 1.09 PlyA +  52893  52898    6                               1.05

 2.08 PlyA -  53312  53307    6                               1.05
 2.07 Term -  55032  54824  209  1  2   70   43   186 0.996   9.80
 2.06 Intr -  55287  55145  143  2  2   81   95    90 0.685   9.00
 2.05 Intr -  55580  55474  107  2  2   20   99    -8 0.390  -7.49
 2.04 Intr -  57961  57837  125  2  2  100   87   138 0.842  15.20
 2.03 Intr -  59972  59846  127  2  1   90   82   131 0.991  12.95
 2.02 Intr -  62989  62795  195  1  0   51   65   216 0.008  15.21
 2.01 Init -  69119  68826  294  2  0   70   66   131 0.313   4.29
 2.00 Prom -  70753  70714   40                              -5.86

 3.00 Prom +  71809  71848   40                              -5.86
 3.01 Init +  72788  72970  183  1  0   85   86   400 0.815  36.62
 3.02 Intr +  73556  73805  250  1  1   62   61   501 0.764  41.81
 3.03 Intr +  76031  76206  176  0  2   78   94   370 0.990  36.26
 3.04 Term +  78946  79119  174  0  0   83   44   207 0.994  13.56
 3.05 PlyA +  84597  84602    6                               1.05

 4.06 PlyA -  84855  84850    6                               1.05
 4.05 Term -  91598  91455  144  2  0   96   42   189 0.301  13.01
 4.04 Intr -  92551  92445  107  2  2   96  105   106 0.997  13.03
 4.03 Intr -  94133  94064   70  2  1   80   64   129 0.903   8.45
 4.02 Intr -  95567  95459  109  1  1   54   79   108 0.904   6.79
 4.01 Init -  95763  95657  107  0  2   85   77   177 0.999  15.99
 4.00 Prom -  95896  95857   40                              -9.46

 5.00 Prom +  95952  95991   40                             -14.47
 5.01 Init +  96044  96197  154  1  1  103   97   119 0.999  14.45
 5.02 Term +  96555  96721  167  1  2  111   46   236 0.999  19.78
 5.03 PlyA +  96956  96961    6                               1.05

 6.07 PlyA -  97671  97666    6                              -0.45
 6.06 Term - 100169  99998  172  1  1  106   43   262 0.998  20.80
 6.05 Intr - 103756 103703   54  0  0   94   48   114 0.916   6.09
 6.04 Intr - 104942 104831  112  0  1   38   97   205 0.996  15.84
 6.03 Intr - 105271 105154  118  1  1   75   68   212 0.999  17.94
 6.02 Intr - 117527 117481   47  0  2  120  115    63 0.911  10.33
 6.01 Init - 123587 123401  187  2  1   87   84   319 0.995  30.62
 6.00 Prom - 131309 131270   40                              -3.26

 7.00 Prom + 150185 150224   40                              -3.66
 7.01 Init + 153097 153152   56  0  2   82   55    28 0.243  -2.34
 7.02 Intr + 154358 154500  143  2  2   45   86    82 0.741   3.70
 7.03 Term + 154834 155225  392  2  2   69   51   329 0.578  22.45
 7.04 PlyA + 157160 157165    6                               1.05

 8.00 Prom + 160977 161016   40                              -2.16
 8.01 Init + 179719 179784   66  0  0   63   95    34 0.322   0.67
 8.02 Intr + 185114 185212   99  1  0   75   92    11 0.404   0.51
 8.03 Intr + 186412 186480   69  0  0  129   60    39 0.165   4.58
 8.04 Intr + 198393 198463   71  2  2   93   60    -9 0.026  -5.22
 8.05 Intr + 199418 199556  139  2  1  127   82    36 0.551   7.37
 8.06 Intr + 201223 201308   86  0  2  110  123    49 0.487   9.22
 8.07 Intr + 201408 201499   92  0  2   74   98   -70 0.410  -7.76
 8.08 Intr + 203710 203887  178  2  1   52   82   230 0.951  17.78
 8.09 Intr + 206138 206309  172  2  1   86   95   175 0.988  17.95
 8.10 Intr + 207227 207370  144  1  0  126   70    92 0.870  11.68
 8.11 Intr + 212597 212630   34  1  1   87   86    16 0.180  -0.90
 8.12 Term + 216489 216682  194  1  2   86   42   104 0.425   3.18
 8.13 PlyA + 218944 218949    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  62944  62795  150  1  0   83   65   212 0.862  18.44


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:176292777_176516363|GENSCAN_predicted_peptide_1|417_aa
NKGQKLEPIPHRRLRMVTNTIEENFPLGTVQFLMDFVSPQHYPPREIVAHIIQKILLSGS
ETVDVLKEAYMLLMKIQQYEPLHPANAKTVEWDWKLLTYVMEEEGQTLPGRVLFLRYVVQ
TLEDDFQQTLRRQRQHLQQSIANMVLSCDKQPHNVRDVIKWLVKAVTEDGLTQPPNGNQT
SSGTGILKASSSHPSSQPNLTKNTNQLIVCQLQRMLSIAVEVDRTPTCSSNKIAEMMFGF
VLDIPERSQREMFFTTMESHLLRCKVLEIIFLHSCETPTRLPLSLAQALYFLNNSTSLLK
CQSDKSQWQTWDELVEHLQFLLSSYQHVLREHLRSSVIDRKDLIIKRIKPKPQQGDDITV
VDVEKQIEAFRSRLIQMLGEPLVPQLQDKVHLLKLLLFYAADLNPDAEPFQKGWSGS

>gi568815593r:176292777_176516363|GENSCAN_predicted_CDS_1|1254_bp
aacaagggtcaaaaattagaacccatccctcatcgaagactaagaatggtaacaaatacc
attgaagagaattttcctctggggactgtgcagtttttgatggactttgtgtcaccccag
cattacccaccaagagaaatcgtggctcacatcatccagaaaatcttgctcagtggctct
gagactgtggatgtcctaaaggaggcctacatgcttctcatgaaaattcaacagtatgaa
ccgctacatccagccaatgccaagacagtggagtgggactggaaactgctcacctatgtc
atggaggaagagggacaaactctgcctgggcgagtccttttcctgcgttatgtcgttcag
accctagaagatgactttcagcagaccctgaggaggcaacggcagcacctgcagcaatcc
attgcaaacatggtgctttcctgtgacaagcagccccacaatgtcagggatgttatcaag
tggctggtcaaagcagtaactgaagatggattgactcagcccccaaatggaaatcaaacg
tcttcaggaacaggaatcttgaaagccagcagtagccacccttcttcccagcccaacctg
acaaagaacaccaatcagctgattgtgtgccagcttcagaggatgctctccatagccgta
gaggtggacaggacccccacctgcagctccaataaaattgccgagatgatgtttgggttt
gtgctggacattcctgagaggagccagagagaaatgttctttactaccatggaaagccac
cttctgcgctgcaaagtgttagaaatcatattcctccacagctgtgagacacccacccgc
ctgcctctgtctctggcccaggccctctactttctgaataattctacgtcactgctcaag
tgtcagtcagataaaagccagtggcagacttgggacgaattggttgagcatctgcagttt
ctgctgtccagttatcaacatgttttaagagaacacttaaggagttccgtgatcgaccga
aaggacttaataatcaaaaggattaagcccaaaccccagcaaggagatgacatcacagtg
gtagacgtagagaagcagattgaggccttccgcagccgcctgatccagatgctgggggag
cctcttgtcccccaactccaagacaaagtgcacttgttgaagctcctgctcttctatgct
gcggacttgaaccctgatgcagagccctttcaaaagggctggagcggctcctga

>gi568815593r:176292777_176516363|GENSCAN_predicted_peptide_2|399_aa
MGRGRVSRSWTTTPSMPCAPLGQVSREIPRSPEALSAVLPARWVVLLPSGSWGPSKSPPL
SQWLGSRLRHSLSGDVGPRNLFSAGLRAAGSPAAAGSQVSLFLALEASAPLGKMSLPIGI
YRRAVSYDDTLEDPAPMTPPPSDMGSVPWKPVIPERKYQHLAKVEEGEASLPSPAMTLSS
AIDSVDKVPVVKAKATHVIMNSLITKQTQESIQHFERQAGLRDAGYTPHKGLTTEETKYL
RVAEALHKLKLQSGEVTKEERQPASAQSTPSTTPHSSPKQRPRGWFTSGSSTALPGPNPS
TMDSGSGDKDRNLSDKWSLFGPRSLQKYDSGSFATQAYRGAQKPSPLELIRAQANRMAED
PAALKPPKMDIPVMEGKKQPPRAHNLKPRDLNVLTPTGF

>gi568815593r:176292777_176516363|GENSCAN_predicted_CDS_2|1200_bp
atggggagggggcgggtctcgcgatcgtggacaacaactcccagcatgccctgtgctccg
ctgggccaagtctcgcgcgagatcccgcggtctccggaggctttatctgcagtgctgcct
gcccgctgggtggtactgctacctagtgggtcttggggaccttcgaaatcgccgccgctc
tcacaatggcttgggtccagactgcgccacagcctctcgggagacgtgggccctcggaac
ctttttagtgccggactccgggccgcaggcagtcccgcggcagcaggatcacaggtgtct
ctgttcttagctcttgaggctagtgcgcctctaggcaagatgtccctgcccatcgggata
taccgccgggcagtcagctatgatgataccctcgaggaccctgcgcccatgactcctcct
ccatcggacatgggcagcgtcccttggaagccagtgattccagagcgcaagtatcagcac
ctcgccaaggtggaggaaggagaggccagtctaccctcccctgccatgaccctgtcatca
gccattgacagtgtggacaaggtcccagtggtgaaggctaaagctacccatgtcatcatg
aattctctgatcacaaaacagacccaggaaagcattcagcattttgagcgacaggcaggg
ctgagagatgctggctacacaccccacaagggcctcaccaccgaggagaccaagtacctt
cgagtggccgaagcactccacaaactaaagttacagagtggagaggtaacaaaagaagag
aggcagcctgcatcagcccagtccaccccaagcaccactccgcactcttcacctaagcag
aggcccaggggctggttcacttctggttcttccacagccttacctggcccaaatcctagc
accatggactctggaagtggggataaggacagaaacttgtcagataagtggagcctcttt
ggaccgagatcccttcagaagtacgattctggaagttttgccacccaggcctaccgagga
gcccagaagccctctccattggaactgatacgtgcccaggccaaccgaatggctgaagat
ccagcagccttgaagccccccaagatggacatcccagtgatggaaggaaagaaacagcca
ccacgggcccataacctcaaaccccgtgacctgaatgtgctcacacccactggcttctag

>gi568815593r:176292777_176516363|GENSCAN_predicted_peptide_3|260_aa
MAPRPLGPLVLALGGAAAVLGSVLFILWKTYFGRGRERRWDRGEAWWGAEAARLPEWDEW
DVLREAASRNLTSASPQPEDEEDEEPALEELEQREVLVLGLDGAGKSTFLRVLSGKPPLE
GHIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWA
RQELHKLLDKDPDLPVVVVANKQDLSEAMSMGELQRELGLQAIDNQREVFLLAASIAPAG
PTFEEPGTVHIWKLLLELLS

>gi568815593r:176292777_176516363|GENSCAN_predicted_CDS_3|783_bp
atggcgccgcggccgctgggccccttggtgctggcgctgggcggcgccgcggcggtgctg
ggctcggtgctcttcatcctctggaagacctacttcggccgcggccgagagcggcgctgg
gaccggggagaggcctggtggggcgcggaggctgcccgcctccccgagtgggacgagtgg
gacgtccttcgggaggccgccagccgcaaccttacctccgcttccccgcagcccgaggac
gaggaggacgaggagccggcgctggaggagctggaacagcgcgaggtgctggtgctgggg
ctggatggcgcaggcaagagcacgttcctgcgcgtgttgtcggggaagccaccgctggaa
ggccacatccccacctggggcttcaactccgtgcgtctgcccaccaaggactttgaggtg
gacctgctagaaattgggggcagccagaacctgcgcttctactggaaggagtttgtgagc
gaggtggatgtgctggtgtttgtggtggactcggctgaccgactgcggctgccctgggcc
cgacaggagctgcacaagctgctggacaaggaccctgacctgcctgtcgtcgtggtggcc
aacaagcaggacctgagcgaggccatgagtatgggggagctgcagcgggagctgggtcta
caggctatcgataaccagcgggaggttttcctcttggcagccagcattgcccctgcagga
cccacctttgaagagcctggcaccgtgcacatctggaaactgctcttggagctcctctcc
tag

>gi568815593r:176292777_176516363|GENSCAN_predicted_peptide_4|178_aa
MPKAKGKTRRQKFGYSVNRKRLNRNARRKAAPRIECSHIRHAWDHAKSVRQNLAEMGLAV
DPNRAVPLRKRKVKAMEVDIEERPKELVRKPYVLNDLEAEASLPEKKGNTLSRDLIDYVR
YMVENHGEDYKAMARDEKNYYQDTPKQIRSKINVYKRFYPAEWQDFLDSLQKRKMEVE

>gi568815593r:176292777_176516363|GENSCAN_predicted_CDS_4|537_bp
atgcccaaggccaagggcaaaacccggaggcagaagtttggttacagtgtcaaccgaaag
cgtctgaaccggaatgctcgacggaaggcagcgccgcggatcgaatgctcccacatccga
catgcctgggaccacgctaaatcggtacggcagaacctggccgagatggggttggctgtg
gaccccaacagggcggtgcccctccgtaagagaaaggtgaaggccatggaggtggacata
gaggagaggcctaaagagcttgtacggaagccctatgtgctgaatgacctggaggcagaa
gccagccttccagaaaagaaaggaaatactctgtctcgggacctcattgactatgtacgc
tacatggtagagaaccacggggaggactataaggccatggcccgtgatgagaagaattac
tatcaagataccccaaaacagattcggagtaagatcaacgtctataaacgcttttaccca
gcagagtggcaagacttcctcgattctttgcagaagaggaagatggaggtggagtga

>gi568815593r:176292777_176516363|GENSCAN_predicted_peptide_5|106_aa
MATPGPVIPEVPFEPSKPPVIEGLSPTVYRNPESFKEKFVRKTRENPVVPIGCLATAAAL
TYGLYSFHRGNSQRSQLMMRTRIAAQGFTVAAILLGLAVTAMKSRP

>gi568815593r:176292777_176516363|GENSCAN_predicted_CDS_5|321_bp
atggcgactcccggccctgtgattccggaggtcccctttgaaccatcgaagcctccagtc
attgaggggctgagccccactgtttacaggaatccagagagtttcaaggaaaagttcgtt
cgcaagacccgcgagaacccggtggtacccataggttgcctggccacggcggccgccctc
acctacggcctctactccttccaccggggcaacagccagcgctctcagctcatgatgcgc
acccggatcgccgcccagggtttcacggtcgcagccatcttgctgggtctggctgtcact
gctatgaagtctcgaccctaa

>gi568815593r:176292777_176516363|GENSCAN_predicted_peptide_6|229_aa
MADDFGFFSSSESGAPEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPT
SGAGSEDMGTTVNGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA
SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFV
KESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR

>gi568815593r:176292777_176516363|GENSCAN_predicted_CDS_6|690_bp
atggctgatgactttggcttcttctcgtcgtcggagagcggtgccccggaggcggcggag
gaggacccggcggccgccttcctggcccagcaggagagcgagattgcaggcatagagaac
gacgagggcttcggggcacctgccggcagccatgcggcccccgcgcagccgggccccacg
agtggggctggttctgaggacatggggaccacagtcaatggagatgtgtttcaggaggcc
aacggtcctgctgatggctacgcagccattgcccaggctgacaggctgacccaggagcct
gagagcatccgcaagtggcgagaggagcagaggaaacggctgcaagagctggatgctgca
tctaaggtcacggaacaggaatggcgggagaaggccaagaaggacctggaggagtggaac
cagcgccagagtgaacaagtagagaagaacaagatcaacaaccggatcgctgacaaagca
ttctaccagcagccagatgctgatatcatcggctacgtggcatccgaggaggctttcgtg
aaggaatccaaggaggagaccccaggcacagagtgggagaaggtggcccagctatgtgac
ttcaaccccaagagcagcaagcagtgcaaagatgtgtcccgcctgcgctcggtgctcatg
tccctgaagcagacgccactgtcccgctag

>gi568815593r:176292777_176516363|GENSCAN_predicted_peptide_7|196_aa
MAHVCNPSTLGGRGGRIPRTSSQSLFCLTGSTLQGDEGGAQAAESLAENHTGGQWKSVYQ
TQASLEETRGQCSASAERQGSRHGKADAGPGFQRRSHGGGRQAVRTTGGAMNGRGSGEPS
PDLPASDPEAAMERWPKSAHSFRFEGGVGNAAPVSRALRNLPRDGQELLETLGQGPATKR
LVFRNGCVSRETSKSI

>gi568815593r:176292777_176516363|GENSCAN_predicted_CDS_7|591_bp
atggctcacgtctgtaatcccagcactttgggaggccgaggcgggcggatcccgagaacc
agctctcaaagccttttctgtctcaccggatcaaccctgcaaggggacgagggtggggcg
caggcggccgagagccttgctgagaatcacacaggtggtcagtggaaaagcgtgtaccag
acccaggcctctctggaagagacaaggggccagtgcagcgctagtgcggagagacaaggc
tccaggcacggaaaagcagatgccgggccggggttccagcgccgcagtcacggcggtgga
cggcaagctgtgcggacgactgggggcgccatgaatggtcgaggatccggggagccgagt
ccagatcttcctgcaagtgaccccgaagcggcaatggaacggtggccgaagtctgcccac
agcttccgcttcgaaggcggcgtcggaaatgccgcgccagtatccagagcccttcggaac
ctcccgagagatggtcaggagcttttggaaactttaggtcaggggccagcgaccaaaagg
ctggtatttcggaacggctgcgtctcccgagaaacctccaagagtatctga

>gi568815593r:176292777_176516363|GENSCAN_predicted_peptide_8|447_aa
MVLNFWAQVILLPWPPRMLGLQVEISLFALKLTGCLEEFLEDRDYILFIFCPSNIDLTGI
ESMDQCRHTLEQHNWNIEGKYARHVLLILMQLYHPTSLFNVRFALRFIRPDPRSRVTDPV
GDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNTL
CAPEVISLINTRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKDRRMTVVGRLEGLI
QPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLASLRADQEKERKKRE
ERERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPESVKIIFKLPNDSR
VERRFHFSQSLTDFNCALSEPEQVKYRLHILSLNASTICVTPKDFWDFDETCEGEDTEKP
VICKHLLLFPHHLWDISAVVSKWQIIN

>gi568815593r:176292777_176516363|GENSCAN_predicted_CDS_8|1344_bp
atggtcttgaacttctgggcccaagtgatcctcttaccttggcctcccagaatgctggga
ttacaggttgagatcagtctctttgccctgaagcttactggttgtttagaggagtttctt
gaggatagagactacatcttattcattttctgtccctccaacatagatctcactggcatc
gaatctatggatcagtgtcgccataccttggaacagcataactggaacatagagggaaaa
tatgcacggcatgtattactaattttaatgcagctgtatcatccaaccagcttgtttaat
gttaggtttgctcttcgttttatacggcctgaccctcgcagccgggtcactgaccccgtt
ggggacattgtttcatttatgcactcttttgaagagaaatatgggagggcacaccctgtc
ttctaccagggaacgtacagccaggcacttaacgatgccaaaagggagcttcgctttctt
ttggtttatcttcatggagatgatcaccaggactctgatgagttttgtcgcaacacactc
tgtgcacctgaagttatttcactaataaacactaggatgctcttctgggcatgctctaca
aacaaacctgagggatacagggtctcacaggctttacgagagaacacctatccattcctg
gccatgattatgctgaaggatcgaaggatgactgtggtgggacggctagaaggcctcatt
caacctgatgacctcattaaccaactgacatttatcatggatgctaaccagacttacctg
gtgtcagaacgcctagaaagggaagaaagaaaccagacccaagtgctgagacaacagcag
gatgaggcctacctggcctctctcagagctgaccaggagaaagaaagaaagaaacgggag
gagcgggagcgtaagcggcggaaggaggaggaggtgcaacagcaaaagttggcagaggag
agacggcggcagaatttacaggaggaaaaggaaaggaagttggaatgcctgccccctgaa
ccttcccctgatgaccctgaaagtgtcaagatcatcttcaaattacctaatgattctcga
gtagagagacgattccacttttcacagtctctaacagattttaactgtgccttgtcagag
ccagagcaggtcaaatacaggctgcacattttgtcacttaatgccagtacaatctgtgtt
actcctaaggacttttgggattttgatgagacctgcgagggagaagacactgagaagcca
gtgatctgcaagcatttgctcttgtttccacatcacctctgggatatttcagctgttgtt
tccaaatggcaaatcatcaactaa