GENSCAN 1.0	Date run:  4-Nov-116	Time: 11:47:51

Sequence gi568815586r:9893146_10099100 : 205955 bp : 38.16% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    284    396  113  1  2   93   68    37 0.402   0.46
 1.02 Intr +   2544   2680  137  0  2  106   54   131 0.318  10.79
 1.03 Term +   6473   6531   59  0  2   40   49    75 0.056  -4.33
 1.04 PlyA +   7598   7603    6                               1.05

 2.04 PlyA -   7641   7636    6                               1.05
 2.03 Term -  11954  11695  260  0  2  115   33   166 0.123   8.53
 2.02 Intr -  13613  13242  372  0  0   65   -5   186 0.070   1.11
 2.01 Init -  17637  17568   70  0  1   96   93   -14 0.391   1.34
 2.00 Prom -  25084  25045   40                              -1.85

 3.04 PlyA -  25405  25400    6                               1.05
 3.03 Term -  28717  28658   60  1  0  102   39    99 0.992   3.23
 3.02 Intr -  29087  28921  167  0  2  111   95   115 0.998  13.26
 3.01 Init -  39184  39130   55  1  1   56   97    85 0.898   7.70
 3.00 Prom -  45726  45687   40                              -5.35

 4.03 PlyA -  47258  47253    6                               1.05
 4.02 Term -  47679  47576  104  1  2  109   49    44 0.758   0.06
 4.01 Init -  50051  49985   67  2  1   71   94    63 0.462   6.49
 4.00 Prom -  64523  64484   40                              -3.35

 5.04 PlyA -  64742  64737    6                               1.05
 5.03 Term -  66913  66800  114  1  0   58   34    95 0.150  -1.31
 5.02 Intr -  70609  70537   73  0  1   86   88    25 0.386   0.79
 5.01 Init -  73319  73111  209  2  2   61   98   140 0.795   8.70
 5.00 Prom -  77041  77002   40                              -4.55

 6.00 Prom +  81968  82007   40                              -4.85
 6.01 Sngl +  82942  83403  462  0  0   96   32   333 0.605  24.41
 6.02 PlyA +  84299  84304    6                               1.05

 7.00 Prom +  95746  95785   40                              -3.65
 7.01 Init +  96401  96452   52  1  1   51   73    72 0.399   3.37
 7.02 Term +  97126  97472  347  2  2   44   47   224 0.461   7.57
 7.03 PlyA +  97489  97494    6                               1.05

 8.06 PlyA -  97947  97942    6                               1.05
 8.05 Term - 100446 100279  168  0  0   38   54    73 0.258  -4.20
 8.04 Intr - 103855 103701  155  2  2   67   83   115 0.964   7.77
 8.03 Intr - 104134 104015  120  2  0   42   89    98 0.924   4.85
 8.02 Intr - 105235 105137   99  2  0   83   78    49 0.786   2.56
 8.01 Init - 105955 105892   64  1  1   87  111    71 0.930  10.66
 8.00 Prom - 106393 106354   40                              -5.75

 9.00 Prom + 115470 115509   40                              -4.35
 9.01 Init + 117615 117705   91  2  1   45   75   105 0.936   5.60
 9.02 Intr + 119640 119738   99  1  0  106   75    57 0.900   5.36
 9.03 Intr + 121378 121596  219  2  0   -8   89   206 0.671   8.45
 9.04 Intr + 129639 129743  105  1  0   77   81    74 0.427   4.87
 9.05 Term + 144282 144613  332  1  2   48   36   175 0.318   2.13
 9.06 PlyA + 144803 144808    6                              -0.45

10.00 Prom + 145483 145522   40                              -4.05
10.01 Init + 146008 146074   67  0  1   54   78   133 0.955   8.19
10.02 Intr + 148321 148475  155  2  2   76   99   135 0.999  12.27
10.03 Intr + 168271 168363   93  0  0   42   85    61 0.006   0.44
10.04 Intr + 171587 171708  122  1  2   87   95    35 0.038   2.47
10.05 Term + 174964 174997   34  1  1  115   48    26 0.010  -2.62
10.06 PlyA + 175390 175395    6                               1.05

11.06 PlyA - 176389 176384    6                               1.05
11.05 Term - 178368 178188  181  2  1   85   37   140 0.343   4.70
11.04 Intr - 180214 180148   67  2  1   86   67    53 0.719   0.04
11.03 Intr - 188268 188092  177  1  0    2  107   136 0.203   5.87
11.02 Intr - 196077 195979   99  1  0  117   75    72 0.493   7.96
11.01 Intr - 205843 205663  181  1  1   41   80   213 0.580  14.32

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:9893146_10099100|GENSCAN_predicted_peptide_1|102_aa
EFIQNSLKPGHFGWIGLYVTFQGNLWMWIDEHFLVPELFSVIGPTDDRSCAVITGNWVYS
EDCSSTFKGICQRDAILTHNGTSGPAKSAKAAFTPEAGEARE

>gi568815586r:9893146_10099100|GENSCAN_predicted_CDS_1|309_bp
gagttcatacagaacagtttaaaacctggacattttggttggattggactatatgttaca
ttccaagggaacctatggatgtggatagatgaacactttttagttccagaattgttttca
gtgattggaccaactgatgacaggagctgtgccgttatcacaggaaactgggtgtattct
gaagactgtagctccacatttaagggcatttgccagagagatgcgatcttgacgcacaat
ggaaccagtggtcctgccaagagtgccaaagcggctttcacccctgaagcaggggaggct
agagaatag

>gi568815586r:9893146_10099100|GENSCAN_predicted_peptide_2|233_aa
MTNKPTLSATWVERILTYLPRQPDGSSQVIEGKRHNGYSIIDGEALVEIGSGRLANNWSA
QTCELLALSQALKCLQNQEGTIYTDSKYSFEVAHTFGKIWTERGLINRKGQDLIHKELIT
QVLNTLQLPKEIAIVHVPGQQKGFSFETESHLVINVTQTNHPLTLEFDACSVISCGDEQA
QRQLSNVDKYLCPYRIESTKYKYGALKSPCGDWTDVWQTTQHGRWTARPPFSK

>gi568815586r:9893146_10099100|GENSCAN_predicted_CDS_2|702_bp
atgacgaataaacccacactctcagcaacgtgggtggaaaggattcttacctacctacca
cggcaaccagatggctcctcccaggtaattgagggaaaaagacataatgggtattcaata
atagatggagaagctttagtagaaatcgggtcaggaagattggctaataattggtctgcc
caaacttgtgaactgcttgcattaagccaggctttaaaatgcttgcaaaaccaggaaggg
accatttatactgattctaagtactcctttgaggtagctcataccttcgggaagatttgg
actgaacgaggtcttattaaccgcaaaggccaagatctcatccacaaagagttaatcacc
caagtactaaatactctccagttacccaaagagatagctattgtccatgttccaggacag
caaaaaggcttttcctttgaaacagaaagtcacctcgtcatcaatgtgactcaaactaat
catcccttaaccctcgagtttgatgcttgttcagttatctcatgtggagatgaacaagct
caaaggcagctatcaaatgtagataagtatttatgtccataccgtattgagtcaaccaag
tataagtatggagccttaaaaagtccctgtggtgactggacagatgtttggcagaccacc
caacatggacggtggacagccaggccccctttttcaaagtag

>gi568815586r:9893146_10099100|GENSCAN_predicted_peptide_3|93_aa
MINPELRDGRADGFIHRIATWSKHAKPVACSGDWLGVRDKCFYFSDDTRNWTASKIFCSL
QKAELAQIDTQEDMPTQYENNEDEDFYDVFTST

>gi568815586r:9893146_10099100|GENSCAN_predicted_CDS_3|282_bp
atgattaatccagagctgcgggatggcagagctgatggcttcatacatcggatagccaca
tggtccaagcatgctaaacctgtggcatgttcaggggactggcttggagtgagagataag
tgtttctatttttctgatgataccagaaattggacagccagtaaaatattttgtagtttg
cagaaagcagaacttgctcagattgatacacaagaagacatgcctactcaatatgaaaac
aacgaggatgaagacttttacgatgtcttcacttccacttaa

>gi568815586r:9893146_10099100|GENSCAN_predicted_peptide_4|56_aa
MEGEGMESKDGTEVVEQQTNTPGLNYIEPYCQLILPIEDFPTHRFEDEPVIYFSCG

>gi568815586r:9893146_10099100|GENSCAN_predicted_CDS_4|171_bp
atggagggagaagggatggagagtaaggatgggacggaggttgtggagcagcagaccaac
acgccaggtctcaactatatagaaccatattgccagttgatccttcccattgaggatttt
cccactcacagatttgaagatgaaccagtcatttattttagttgtggatag

>gi568815586r:9893146_10099100|GENSCAN_predicted_peptide_5|131_aa
MSHLCKTPLEIRLSISPAATPIAPGTLPQGSLTDSFPDLLGLTTEDCHCPITSEAYRTIT
DTLGNSHSGGFASHKVSSSSVDPLPPCVYLLIGQLVFSLMGFPGLQYDSIPWFQTGKRQV
HTEMKSVGETS

>gi568815586r:9893146_10099100|GENSCAN_predicted_CDS_5|396_bp
atgtcccatctgtgcaagaccccactggaaatcagactgtccatctcaccggcagccact
cccatagcccctggaactctgccccaaggctctctgactgactccttcccagatcttctc
ggcttaacaactgaagactgtcactgcccaatcacctcagaagcctacaggaccatcaca
gacactctaggtaactctcacagtggaggttttgcctcgcacaaggtctcttcttcctct
gtggatcctctacctccatgtgtctacctgctaattggacagctagtcttcagcctgatg
ggatttccaggtcttcagtatgattcgattccctggtttcaaacagggaagaggcaagtc
catacagaaatgaagtctgttggagagactagttaa

>gi568815586r:9893146_10099100|GENSCAN_predicted_peptide_6|153_aa
MGCSWITSARTVQKGNVRSEAPHRVPTGVLSSGAVRSGPPSSSSQNGRSTDSMHCPLGKA
ADTQYQPMKAAMRETVPCKATGAELPKDMGAYLLHQHDLDVRYRAKGDDFGALRFGALWT
CMGPVAPLFWPISPIWNDRIYPMPVLSLYLGSN

>gi568815586r:9893146_10099100|GENSCAN_predicted_CDS_6|462_bp
atggggtgctcatggataacctctgctaggacagtgcagaagggaaatgtgaggtcagaa
gctccacacagagtccccactggggtactgtccagtggagcagtgagaagtggaccaccg
tcctccagctctcagaatggtagatccactgacagcatgcactgtccacttggaaaagct
gcagacactcaatatcagcccatgaaagcagccatgagggagactgtaccttgcaaagcc
acaggagcagagctgcccaaagacatgggagcctacctcttgcatcagcatgacctggat
gtgagatatagagccaaaggagatgattttggagctttaagatttggtgccctttggact
tgcatggggcctgtagcccctttgttttggccaatttctcccatttggaatgaccgtatt
tatccaatgcctgtactctcattgtatctaggaagtaactaa

>gi568815586r:9893146_10099100|GENSCAN_predicted_peptide_7|132_aa
MGERGEEATEEMLEASREQSKLKTTWRQLTILDAIKKICDSWKEDKVSTLTDTWKKLNQT
LMDNLQAFKTSVVEVTADVVEIARELELEVEPEDVAELMQFYQETLTNEELLFMDEQRKW
FLRQILFLVNML

>gi568815586r:9893146_10099100|GENSCAN_predicted_CDS_7|399_bp
atgggtgagagaggtgaagaagctacagaagaaatgttggaagctagcagagagcaaagt
aaattgaaaaccacctggagacaacttaccattctagatgccattaaaaagatttgtgat
tcatggaaggaagacaaagtgtcaacattaacagacacttggaagaagttgaatcaaacc
ctcatggataacttgcaggcgttcaagacttcagtggtggaagtaactgcagatgtggtg
gaaatagcaagagaactagaactggaagtggagcctgaagatgtggctgaattgatgcaa
ttttatcaggaaactttaacaaatgaggagttgctttttatggatgagcaaagaaaatgg
ttcttgagacaaatattattcctggtgaacatgctgtga

>gi568815586r:9893146_10099100|GENSCAN_predicted_peptide_8|201_aa
MQDEDGYITLNIKTRKPALISVGSASSSWWRVMALILLILCVGMVVGLVALGIWSVMQRN
YLQGENENRTGTLQQLAKRFCQYVVKQSELKGTFKGHKCSPCDTNWRYYGDSCYGFFRHN
LTWEESKQYCTDMNATLLKIDNRNIVIMRFPIILEPSPSLLQGSYCTYCSLAPNFMLNEI
DIGLFKYAYLVLPSRVELSQQ

>gi568815586r:9893146_10099100|GENSCAN_predicted_CDS_8|606_bp
atgcaggatgaagatggatacatcaccttaaatattaaaactcggaaaccagctctcatc
tccgttggctctgcatcctcctcctggtggcgtgtgatggctttgattctgctgatcctg
tgcgtggggatggttgtcgggctggtggctctggggatttggtctgtcatgcagcgcaat
tacctacaaggtgagaatgaaaatcgcacaggaactctgcaacaattagcaaagcgcttc
tgtcaatatgtggtaaaacaatcagaactaaagggcactttcaaaggtcataaatgcagc
ccctgtgacacaaactggagatattatggagatagctgctatgggttcttcaggcacaac
ttaacatgggaagagagtaagcagtactgcactgacatgaatgctactctcctgaagatt
gacaaccggaacattgtgataatgcgttttcccattattttggagccatctccatcactt
cttcagggctcctattgtacctactgttcccttgctcctaattttatgctaaatgaaatt
gatattgggctttttaaatatgcatatcttgtactgccaagcagggtggaactttctcaa
caatga

>gi568815586r:9893146_10099100|GENSCAN_predicted_peptide_9|281_aa
MSEEVTYATLTFQDSAGARNNRDGNNLRKRGHPAPSPIWRHAALGLVTLCLMLLIGLVTL
GMMFLQISNDINSDSEKLSQLQKTIQQQQDNLSQQLGNSNNLSMEEEFLKSQISSVLKRQ
EQMAIKLCQELIIHTSVLEVGKCKLKAPAGLVLDEAILFFKKATVTLGTEEGGQRPFRQL
RAKEGTDYEEATDYEEATIPSQGTLTRTRTHSHWDHVDTPIHLTFTFWDMGGNWRTQEKP
MQTRGDRANSTQWPQLGSNFFSQHRYNKTILHKRMLLKNLL

>gi568815586r:9893146_10099100|GENSCAN_predicted_CDS_9|846_bp
atgtctgaagaagtgacctacgcgacactcacatttcaggattctgctggagcaaggaat
aaccgagatggaaataacctaagaaaaagagggcatccagctccatctcccatttggcgt
catgctgctctgggtctggtaactctttgcctgatgttgctgattgggctggtgacattg
gggatgatgtttttgcagatatctaatgacattaactcagattcagagaaattgagtcaa
cttcagaaaaccatccaacagcagcaggataacttatcccagcaactgggcaactccaac
aacttgtccatggaggaggaatttctcaagtcacagatctccagtgtactgaagaggcag
gaacaaatggccatcaaactgtgccaagagctaatcattcatacttcagttctagaagtt
gggaagtgtaagttaaaggcaccagcaggtttggtgcttgatgaggccattctcttcttt
aagaaggcaactgtaaccttgggaacggaggaaggtggccagagaccattcaggcagctc
agggccaaggagggcactgactatgaagaggccaccgactatgaagaggccaccatccca
tcgcagggcacactcacacgcacccgcactcactcacactgggaccatgtagacacgcca
attcacctaacgttcacattttgggacatgggaggaaactggaggacccaggaaaaaccc
atgcaaacacggggagaccgtgcaaactccacacagtggccccagctgggaagcaatttt
ttttctcaacatcgttataacaaaacaatcttacataaaaggatgttactcaagaacctg
ctttaa

>gi568815586r:9893146_10099100|GENSCAN_predicted_peptide_10|156_aa
MALILLILCMGMVVGLVALGIWCDYKRSPCDANWTYYGDSCYGFFKHNLTWKESEQYCTD
MKATLLKTDNQNILFNLIYNIQYYVETLGIQKNATKGNVQSNAKEDFITGSLRKIKGSYD
YWVGLSQDGHSGRWLWQDGSSPSPGLAHDLFPVDKS

>gi568815586r:9893146_10099100|GENSCAN_predicted_CDS_10|471_bp
atggctttgattctgctgatcctgtgcatggggatggttgtcgggctggtggctctgggg
atttggtgtgactataaacgcagcccctgtgatgccaactggacatattatggagatagc
tgctatgggttcttcaaacacaacttgacatggaaagagagtgagcagtactgcactgac
atgaaggctactctcctgaagactgacaaccagaacattctgttcaatcttatttataac
atccaatactacgtggaaacactagggatccaaaagaatgcaactaaaggaaatgtacag
tcaaatgccaaagaggattttatcactggcagcttgaggaagattaaaggaagctatgat
tactgggtggggttgtctcaggatggacacagcggacgctggctttggcaagatggctcc
tctccttctcctggcctggctcatgacctgtttcctgttgataaatcctga

>gi568815586r:9893146_10099100|GENSCAN_predicted_peptide_11|234_aa
LTVARRPRAIRPHFTLTAVGIQMQAKYSSTRDMLDDDGDTTMSLHSQGSATTRHPEPRRT
EHRAPSSTWRPVALTLLTLCLVLLIGLAALGLLFFQYYQLSNTGQDTISQMEERLGNTSQ
ELQSLQVQNIKLAGSLQHVAEKLCRELYNKAGGLLRPDSGKAWLWMDGTPFTSELFHIII
DVTSPRSRDCVAILNGMIFSKDCKELKRCVCERRAGMVKPESLHVPPETLGEGD

>gi568815586r:9893146_10099100|GENSCAN_predicted_CDS_11|705_bp
ctcacagtagcccggcggcccagggcaatccgaccacatttcactctcaccgctgtagga
atccagatgcaggccaagtacagcagcacgagggacatgctggatgatgatggggacacc
accatgagcctgcattctcaaggctctgccacaactcggcatccagagccccggcgcaca
gagcacagggctccctcttcaacgtggcgaccagtggccctgaccctgctgactttgtgc
ttggtgctgctgatagggctggcagccctggggcttttgttttttcagtactaccagctc
tccaatactggtcaagacaccatttctcaaatggaagaaagattaggaaatacgtcccaa
gagttgcaatctcttcaagtccagaatataaagcttgcaggaagtctgcagcatgtggct
gaaaaactctgtcgtgagctgtataacaaagctggagggcttttgcgccctgacagtggc
aaggcctggctgtggatggatggaacccctttcacttctgaactgttccatattataata
gatgtcaccagcccaagaagcagagactgtgtggccatccttaatgggatgatcttctca
aaggactgcaaagaattgaagcgttgtgtctgtgagagaagggcaggaatggtgaagcca
gagagcctccatgtcccccctgaaacattaggcgaaggtgactga