Result of FASTA (ccds) for pF1KB6930
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6930, 228 aa
  1>>>pF1KB6930 228 - 228 aa - 228 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.6178+/-0.000768; mu= 12.5887+/- 0.046
 mean_var=66.0938+/-13.167, 0's: 0 Z-trim(108.4): 22  B-trim: 0 in 0/49
 Lambda= 0.157759
 statistics sampled from 10160 (10178) to 10160 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.7), E-opt: 0.2 (0.313), width:  16
 Scan time:  1.760

The best scores are:                                      opt bits E(32554)
CCDS549.1 CMPK1 gene_id:51727|Hs108|chr1           ( 228) 1499 349.5   1e-96
CCDS44135.1 CMPK1 gene_id:51727|Hs108|chr1         ( 179)  814 193.6   7e-50
CCDS83419.1 AK1 gene_id:203|Hs108|chr9             ( 210)  522 127.2 8.2e-30
CCDS6881.1 AK1 gene_id:203|Hs108|chr9              ( 194)  521 126.9 8.9e-30
CCDS676.1 AK5 gene_id:26289|Hs108|chr1             ( 536)  441 108.9 6.7e-24
CCDS675.1 AK5 gene_id:26289|Hs108|chr1             ( 562)  441 108.9 6.9e-24


>>CCDS549.1 CMPK1 gene_id:51727|Hs108|chr1                (228 aa)
 initn: 1499 init1: 1499 opt: 1499  Z-score: 1849.9  bits: 349.5 E(32554): 1e-96
Smith-Waterman score: 1499; 99.6% identity (99.6% similar) in 228 aa overlap (1-228:1-228)

               10        20        30        40        50        60
pF1KB6 MLSRCRSRLLHVLGLSFLLQTRRPILLCSPRLMKPLVVFVLGGPGAGKGTQCARIVEKYG
       ::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MLSRCRSGLLHVLGLSFLLQTRRPILLCSPRLMKPLVVFVLGGPGAGKGTQCARIVEKYG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 YTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 YTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 FLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 FLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESL
              130       140       150       160       170       180

              190       200       210       220        
pF1KB6 EKRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQIFDKEG
       ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 EKRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQIFDKEG
              190       200       210       220        

>>CCDS44135.1 CMPK1 gene_id:51727|Hs108|chr1              (179 aa)
 initn: 814 init1: 814 opt: 814  Z-score: 1009.0  bits: 193.6 E(32554): 7e-50
Smith-Waterman score: 1079; 78.1% identity (78.1% similar) in 228 aa overlap (1-228:1-179)

               10        20        30        40        50        60
pF1KB6 MLSRCRSRLLHVLGLSFLLQTRRPILLCSPRLMKPLVVFVLGGPGAGKGTQCARIVEKYG
       ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::   
CCDS44 MLSRCRSGLLHVLGLSFLLQTRRPILLCSPRLMKPLVVFVLGGPGAGKGTQCARIVE---
               10        20        30        40        50          

               70        80        90       100       110       120
pF1KB6 YTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNK
                                                     ::::::::::::::
CCDS44 ----------------------------------------------EMDQTMAANAQKNK
                                                      60        70 

              130       140       150       160       170       180
pF1KB6 FLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 FLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESL
              80        90       100       110       120       130 

              190       200       210       220        
pF1KB6 EKRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQIFDKEG
       ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EKRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQIFDKEG
             140       150       160       170         

>>CCDS83419.1 AK1 gene_id:203|Hs108|chr9                  (210 aa)
 initn: 428 init1: 203 opt: 522  Z-score: 648.7  bits: 127.2 E(32554): 8.2e-30
Smith-Waterman score: 522; 40.7% identity (74.5% similar) in 204 aa overlap (22-225:11-207)

               10        20        30        40        50        60
pF1KB6 MLSRCRSRLLHVLGLSFLLQTRRPILLCSPRLMKPLVVFVLGGPGAGKGTQCARIVEKYG
                            :.  :    .: :  ..::.::::.:::::: .::.:::
CCDS83            MGCCSSSDPRREDDLRAREKLKKTKIIFVVGGPGSGKGTQCEKIVQKYG
                          10        20        30        40         

               70        80        90       100       110       120
pF1KB6 YTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNK
       :::::.:.:::.: ..  :  :. . . ...:..::.: ....:.  :  .  .:..:. 
CCDS83 YTHLSTGDLLRSEVSS-GSARGKKLSEIMEKGQLVPLETVLDMLRDAM--VAKVNTSKG-
      50        60         70        80        90         100      

              130       140       150       160       170       180
pF1KB6 FLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESL
       :::::.::. .. . ... . :.   ...:. : . :   .: :.::..::: :::.:..
CCDS83 FLIDGYPREVQQGEEFERRI-GQP--TLLLYVDAGPETMTQRLLKRGETSGRVDDNEETI
         110       120          130       140       150       160  

              190       200       210       220        
pF1KB6 EKRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQIFDKEG
       .::..:: ..:.:.: .::. : :.:..:  ::: ::..:   .:   
CCDS83 KKRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDSVFSQVCTHLDALK
            170       180       190       200       210

>>CCDS6881.1 AK1 gene_id:203|Hs108|chr9                   (194 aa)
 initn: 428 init1: 203 opt: 521  Z-score: 648.0  bits: 126.9 E(32554): 8.9e-30
Smith-Waterman score: 521; 41.5% identity (76.4% similar) in 195 aa overlap (31-225:4-191)

               10        20        30        40        50        60
pF1KB6 MLSRCRSRLLHVLGLSFLLQTRRPILLCSPRLMKPLVVFVLGGPGAGKGTQCARIVEKYG
                                     .: :  ..::.::::.:::::: .::.:::
CCDS68                            MEEKLKKTKIIFVVGGPGSGKGTQCEKIVQKYG
                                          10        20        30   

               70        80        90       100       110       120
pF1KB6 YTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNK
       :::::.:.:::.: ..  :  :. . . ...:..::.: ....:.  :  .  .:..:. 
CCDS68 YTHLSTGDLLRSEVSS-GSARGKKLSEIMEKGQLVPLETVLDMLRDAM--VAKVNTSKG-
            40         50        60        70        80            

              130       140       150       160       170       180
pF1KB6 FLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESL
       :::::.::. .. . ... . :.   ...:. : . :   .: :.::..::: :::.:..
CCDS68 FLIDGYPREVQQGEEFERRI-GQP--TLLLYVDAGPETMTQRLLKRGETSGRVDDNEETI
      90       100        110         120       130       140      

              190       200       210       220        
pF1KB6 EKRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQIFDKEG
       .::..:: ..:.:.: .::. : :.:..:  ::: ::..:   .:   
CCDS68 KKRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDSVFSQVCTHLDALK
        150       160       170       180       190    

>>CCDS676.1 AK5 gene_id:26289|Hs108|chr1                  (536 aa)
 initn: 484 init1: 187 opt: 441  Z-score: 542.6  bits: 108.9 E(32554): 6.7e-24
Smith-Waterman score: 441; 36.6% identity (71.1% similar) in 194 aa overlap (32-225:347-533)

              10        20        30        40        50        60 
pF1KB6 LSRCRSRLLHVLGLSFLLQTRRPILLCSPRLMKPLVVFVLGGPGAGKGTQCARIVEKYGY
                                     : :  ..:..::::.:::::: ..:::::.
CCDS67 IIDTGSDYEDQGDDQLNVFGEDTMGGFMEDLRKCKIIFIIGGPGSGKGTQCEKLVEKYGF
        320       330       340       350       360       370      

              70        80        90       100       110       120 
pF1KB6 THLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKF
       ::::.:::::.:  . .:. ..::.  ...: .::  :.. :::. :   .:. ..   :
CCDS67 THLSTGELLREELAS-ESERSKLIRDIMERGDLVPSGIVLELLKEAM---VASLGDTRGF
        380       390        400       410       420          430  

             130       140       150       160       170       180 
pF1KB6 LIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLE
       ::::.::.  . . ... .   .: ..:. .::. .   .: :.:..::   ::. ... 
CCDS67 LIDGYPREVKQGEEFGRRI---GDPQLVICMDCSADTMTNRLLQRSRSSLPVDDTTKTIA
            440       450          460       470       480         

             190       200       210       220        
pF1KB6 KRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQIFDKEG
       ::...: ... :.:  ::   ...::.:  . ..:: ..   .:   
CCDS67 KRLEAYYRASIPVIAYYETKTQLHKINAEGTPEDVFLQLCTAIDSIF
     490       500       510       520       530      

>--
 initn: 350 init1: 169 opt: 410  Z-score: 504.5  bits: 101.8 E(32554): 8.9e-22
Smith-Waterman score: 410; 34.2% identity (67.8% similar) in 199 aa overlap (30-227:101-292)

                10        20        30        40        50         
pF1KB6  MLSRCRSRLLHVLGLSFLLQTRRPILLCSPRLMKPLVVFVLGGPGAGKGTQCARIVEKY
                                     :   .: ...:.::::.:::::  .:.:.:
CCDS67 RLPPIHQFSIESDTDLSETAELIEEYEVFDPTRPRPKIILVIGGPGSGKGTQSLKIAERY
               80        90       100       110       120       130

      60        70        80         90       100       110        
pF1KB6 GYTHLSAGELLRDERKNPDSQYG-ELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQK
       :. ..:.::::: . .. .:.    :: : :  :...: : ::. .:... :      ..
CCDS67 GFQYISVGELLRKKIHSTSSNRKWSLIAKIITTGELAPQETTITEIKQKLMQI----PDE
              140       150       160       170       180          

      120       130       140       150       160       170        
pF1KB6 NKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRE
       . ..::::::  :  :. .   :     ..:.:. : :.   :: :.:....:: ::: .
CCDS67 EGIVIDGFPR--DVAQALS-FEDQICTPDLVVFLACANQRLKERLLKRAEQQGRPDDNVK
        190         200        210       220       230       240   

      180       190       200       210       220                  
pF1KB6 SLEKRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQIFDKEG          
       . ..:.... :.. :..  ..: : .  .::... :::: .. .  :..           
CCDS67 ATQRRLMNFKQNAAPLVKYFQEKGLIMTFDADRDEDEVFYDISMAVDNKLFPNKEAAAGS
           250       260       270       280       290       300   

CCDS67 SDLDPSMILDTGEIIDTGSDYEDQGDDQLNVFGEDTMGGFMEDLRKCKIIFIIGGPGSGK
           310       320       330       340       350       360   

>>CCDS675.1 AK5 gene_id:26289|Hs108|chr1                  (562 aa)
 initn: 484 init1: 187 opt: 441  Z-score: 542.3  bits: 108.9 E(32554): 6.9e-24
Smith-Waterman score: 441; 36.6% identity (71.1% similar) in 194 aa overlap (32-225:373-559)

              10        20        30        40        50        60 
pF1KB6 LSRCRSRLLHVLGLSFLLQTRRPILLCSPRLMKPLVVFVLGGPGAGKGTQCARIVEKYGY
                                     : :  ..:..::::.:::::: ..:::::.
CCDS67 IIDTGSDYEDQGDDQLNVFGEDTMGGFMEDLRKCKIIFIIGGPGSGKGTQCEKLVEKYGF
            350       360       370       380       390       400  

              70        80        90       100       110       120 
pF1KB6 THLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKF
       ::::.:::::.:  . .:. ..::.  ...: .::  :.. :::. :   .:. ..   :
CCDS67 THLSTGELLREELAS-ESERSKLIRDIMERGDLVPSGIVLELLKEAM---VASLGDTRGF
            410        420       430       440          450        

             130       140       150       160       170       180 
pF1KB6 LIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLE
       ::::.::.  . . ... .   .: ..:. .::. .   .: :.:..::   ::. ... 
CCDS67 LIDGYPREVKQGEEFGRRI---GDPQLVICMDCSADTMTNRLLQRSRSSLPVDDTTKTIA
      460       470          480       490       500       510     

             190       200       210       220        
pF1KB6 KRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQIFDKEG
       ::...: ... :.:  ::   ...::.:  . ..:: ..   .:   
CCDS67 KRLEAYYRASIPVIAYYETKTQLHKINAEGTPEDVFLQLCTAIDSIF
         520       530       540       550       560  

>--
 initn: 350 init1: 169 opt: 410  Z-score: 504.1  bits: 101.8 E(32554): 9.2e-22
Smith-Waterman score: 410; 34.2% identity (67.8% similar) in 199 aa overlap (30-227:127-318)

                10        20        30        40        50         
pF1KB6  MLSRCRSRLLHVLGLSFLLQTRRPILLCSPRLMKPLVVFVLGGPGAGKGTQCARIVEKY
                                     :   .: ...:.::::.:::::  .:.:.:
CCDS67 RLPPIHQFSIESDTDLSETAELIEEYEVFDPTRPRPKIILVIGGPGSGKGTQSLKIAERY
        100       110       120       130       140       150      

      60        70        80         90       100       110        
pF1KB6 GYTHLSAGELLRDERKNPDSQYG-ELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQK
       :. ..:.::::: . .. .:.    :: : :  :...: : ::. .:... :      ..
CCDS67 GFQYISVGELLRKKIHSTSSNRKWSLIAKIITTGELAPQETTITEIKQKLMQI----PDE
        160       170       180       190       200           210  

      120       130       140       150       160       170        
pF1KB6 NKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRE
       . ..::::::  :  :. .   :     ..:.:. : :.   :: :.:....:: ::: .
CCDS67 EGIVIDGFPR--DVAQALS-FEDQICTPDLVVFLACANQRLKERLLKRAEQQGRPDDNVK
            220          230       240       250       260         

      180       190       200       210       220                  
pF1KB6 SLEKRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQIFDKEG          
       . ..:.... :.. :..  ..: : .  .::... :::: .. .  :..           
CCDS67 ATQRRLMNFKQNAAPLVKYFQEKGLIMTFDADRDEDEVFYDISMAVDNKLFPNKEAAAGS
     270       280       290       300       310       320         

CCDS67 SDLDPSMILDTGEIIDTGSDYEDQGDDQLNVFGEDTMGGFMEDLRKCKIIFIIGGPGSGK
     330       340       350       360       370       380         




228 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 12:05:03 2016 done: Fri Nov  4 12:05:03 2016
 Total Scan time:  1.760 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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