GENSCAN 1.0	Date run:  4-Nov-116	Time: 12:05:30

Sequence gi568815597f:47233946_47476742 : 242797 bp : 44.81% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2597   2675   79  1  1   20   72   107 0.409   3.52
 1.02 Term +   7453   7598  146  2  2   95   49    76 0.503   2.47
 1.03 PlyA +   8602   8607    6                               1.05

 2.14 PlyA -   9447   9442    6                               1.05
 2.13 Term -  17977  17191  787  0  1   97   37   344 0.605  23.00
 2.12 Intr -  26594  26344  251  2  2   66   93    58 0.554   0.34
 2.11 Intr -  29168  28958  211  1  1   71   91    94 0.597   6.92
 2.10 Intr -  35921  35690  232  0  1   73   80   209 0.862  15.43
 2.09 Intr -  38248  38131  118  1  1   60   91    96 0.553   7.14
 2.08 Intr -  47264  47001  264  2  0   88   69    94 0.962   5.21
 2.07 Intr -  48514  48412  103  0  1   98   81    44 0.795   4.88
 2.06 Intr -  53715  53606  110  0  2   70   83    75 0.969   4.28
 2.05 Intr -  55640  55490  151  1  1   71  106    61 0.960   6.36
 2.04 Intr -  66207  65960  248  0  2   47  106    17 0.098  -4.34
 2.03 Intr -  67803  67616  188  1  2   96   86    89 0.807   8.91
 2.02 Intr -  68401  68289  113  0  2   82   85    71 0.781   6.22
 2.01 Init -  76374  76331   44  0  2   97   80    10 0.307   1.02
 2.00 Prom -  77080  77041   40                              -8.56

 3.00 Prom +  78664  78703   40                              -2.36
 3.01 Init + 100001 100171  171  1  0    6   78   342 0.966  22.44
 3.02 Intr + 134524 134670  147  0  0   94   86   129 0.991  13.73
 3.03 Intr + 139010 139162  153  1  0  108   80    90 0.993  10.47
 3.04 Intr + 140964 141040   77  2  2  100   65    12 0.987  -1.59
 3.05 Intr + 141252 141348   97  0  1   68  100    98 0.986   9.01
 3.06 Term + 142759 142800   42  0  0  130   31    75 0.993   3.16
 3.07 PlyA + 143680 143685    6                               1.05

 4.00 Prom + 166089 166128   40                              -3.26
 4.01 Sngl + 182389 183330  942  0  0   92   52  1480 0.911 139.33
 4.02 PlyA + 184831 184836    6                               1.05

 5.00 Prom + 189612 189651   40                              -5.46
 5.01 Init + 200594 200704  111  1  0   92   82    88 0.669   8.82
 5.02 Term + 204074 205678 1605  1  0   59   47  2138 0.856 196.90
 5.03 PlyA + 205929 205934    6                               1.05

 6.05 PlyA - 206451 206446    6                               1.05
 6.04 Term - 211160 210470  691  1  1  -28   44   274 0.333   4.46
 6.03 Intr - 212237 212102  136  0  1   77   96    16 0.754   0.93
 6.02 Intr - 215348 215209  140  1  2   99  100    38 0.777   6.21
 6.01 Init - 233906 233851   56  2  2   59   73    62 0.040   2.56

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 100244 100354  111  1  0   57   37    91 0.925  -0.54


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:47233946_47476742|GENSCAN_predicted_peptide_1|74_aa
MVSITEEPVRKANSQASPQAYYYYSEAPSPVSLKHAHNMVPTTLILVSVYPTKTLKNWDH
IRGLSIPQHIMEAE

>gi568815597f:47233946_47476742|GENSCAN_predicted_CDS_1|225_bp
atggtcagcatcaccgaggaacctgttagaaaagcaaattctcaggcctcaccccaggcc
tactactactactctgaggctccttctcctgtgtcccttaaacatgcccacaacatggtg
ccaaccacacttatcttggtgtctgtgtaccccaccaagactctcaaaaactgggaccac
atccgtggtttgtctataccccagcatatcatggaggcagagtag

>gi568815597f:47233946_47476742|GENSCAN_predicted_peptide_2|939_aa
MEPIYPFARPQMNTRNPKLVVTEKTIRLAYRHAKQNKKNSSCFLLGSLTADEDEEGVTLT
VDRFDPGREVPECLEITPTASLPGDFLIPCKVHTQELCSREMIVHSVDDFSSALKALQCH
ICSKDSLDCGKLLSLRVHITSRESLDSVEFDLHWAAVTLANNFKCTPVKPIPIIPTALAR
NLSSNLNISQVQGTYKYGVFSESGNFIIVLYSMTHKEPEFYECFPCDGKIPDFRFQLLTS
KETLHLFKNVEPPDKNPIRCELSAESQNAETEFFSKASKNFSIKRSSQKLSSGKMPIHDH
DSGVEDEDFSPRPIPSPHPISKIQPSVPELSLVLDGNFIESNPLPTPLEMVNNENPPLIN
HLEHLKPLQPQLYDEKHSPEVEAGEPSLRGIPNQLNQDKPALLRHCKTTAVEDTVQAGRQ
MELVSVEAQSSPGLHMRKGVSIAVSTGASLFWNAAGEDQEPDSQMKQDDTKISSEDMNFS
VDINNEVTSLPGSASSLKAVDIPSFEESNIAVEEEFNQPLSVSNSSLVVRKEPDVPVFFP
SGQLAESVSMCLQTGPTGGASNNSETSEEPKIEHVMQPLLHQPSDNQKIYQDLLGQVNHL
LNSSSKETEQPSTKAVIISHECTRTQNVYHTKKKTHHSRLVDKDCVLNATLKQLRSLGVK
IDSPTKVKKNAHNVDHASVLACISPEAVISGLNCMSFANVGMSGLSPNGVDLSMEANAIA
LKYLNENQLSQLSVTRSNQNNCDPFSLLHINTDRSTVGLSLISPNNMSFATKKYMKRYGL
LQSSDNSEDEEEPPDNADSKSEYLLNQNLRSIPEQLGGQKEPSKNDHEIINCSNCESVGT
NADTPVLRNITNEVLQTKAKQQLTEKPAFLVKNLKPSPAVNLRTGKAEFTQHPEKENEGD
ITIFPESLQPSETLKQMNSMNSVGTFLDVKRLRQLPKLF

>gi568815597f:47233946_47476742|GENSCAN_predicted_CDS_2|2820_bp
atggagcctatatatccttttgcacggccccagatgaataccagaaatccaaagcttgtg
gtgactgagaagaccatccgacttgcttatcgtcatgctaagcagaataaaaaaaattcg
tcatgctttttacttggttctctgacagcagacgaagatgaagaaggtgtaacattgaca
gtagatcgctttgatcctggtcgagaagtacctgaatgcctagaaataacccctactgct
tctcttcctggggactttttgattccatgcaaagttcatactcaagaactttgttcaaga
gaaatgatagttcacagtgtagatgacttcagttcagctttaaaggctctacagtgccat
atatgtagcaaagattccttggactgtggtaagctgctttccctaagagttcatatcact
tccagggagagtttggacagtgtggaatttgacttgcattgggcagcagtaactctagca
aataactttaaatgcacacctgtgaagcccatccccattattccaacagctctggcaaga
aacttgagcagtaatctgaatatttctcaagttcaagggacttataaatatggggttttt
tcagaatctggaaatttcatcatagttctctattctatgacacataaggaacctgagttt
tatgaatgcttcccttgtgatggcaagatacctgactttcggtttcagttgctaaccagt
aaggaaacattacatcttttcaaaaatgttgaacctcctgacaaaaatccaatccgttgt
gaactgagcgctgaaagccaaaatgcagaaacagagtttttcagtaaggcttccaagaat
ttttcaattaagaggtcttcccaaaagttatcttctgggaagatgccaatacatgatcac
gactctggtgttgaagatgaagatttttctccaagaccaattcctagtcctcatccaatt
tctaagatccaaccatcagttcctgaactttcacttgtgttggatggcaatttcatagaa
tcaaaccctctgcctactccattggaaatggtgaataatgaaaatcctcctttgattaac
cacttggaacacttgaagccattgcaaccccagctttatgatgagaaacacagtccagaa
gttgaagctggagagccttccttgagaggaataccaaatcagttaaaccaggataaacca
gctcttttgagacactgcaaaacaactgctgttgaagacacagtgcaagctggaagacaa
atggagttggtttctgtggaagcacagtcttcccctggcttgcacatgagaaaaggtgta
agcattgctgtgagcacaggtgctagcttgttttggaatgcagcaggtgaggatcaagag
cctgactctcaaatgaagcaagatgataccaaaatttccagtgaggacatgaatttttct
gtcgatattaataatgaagtcacaagtcttccaggtagtgcatcttcattaaaagcagtt
gatattcccagttttgaagagagcaacattgctgtggaagaagaatttaaccagccactt
tctgtatccaactcttctctagttgtgagaaaagaacctgatgtacctgtgttctttcca
agtggccagctggcagaaagtgtaagcatgtgtttacagactggaccaacagggggtgcc
agtaacaattctgaaacatcagaggaaccaaaaattgagcatgtaatgcaacccttgctt
catcaaccatcagataaccagaaaatttaccaggatttattgggtcaagtaaaccaccta
ttaaatagttcctccaaggaaactgagcagccgtctaccaaagcagtaattatcagtcat
gaatgcaccagaacccaaaacgtttaccatacaaagaaaaaaacacatcattcaagactg
gtggacaaagattgtgtccttaatgcaactcttaagcaactaagaagccttggagtaaaa
attgattctcccactaaagtgaagaaaaatgcacataacgtggatcacgccagtgtgttg
gcatgcatcagcccagaagcagtgatctctggattaaactgcatgtcatttgctaatgtt
ggcatgagcggcttaagccccaatggtgtggatttgagcatggaggcaaatgctatagct
ctgaaatatttaaatgaaaatcagctgtcacaactgtctgtcactcgatcgaaccaaaat
aattgtgacccattcagccttctccatattaatacagacagaagcacagtggggcttagt
ttaatttcaccaaacaacatgtcatttgcaaccaaaaaatatatgaagagatatggactc
ctacaaagcagtgacaatagtgaagatgaagaggaacctcccgacaatgcagatagcaag
agtgaatatttattgaatcagaaccttaggtccatacctgaacagcttggtggtcagaaa
gagccttctaagaatgaccatgaaataattaattgttctaactgtgaatctgtggggacc
aacgcagatacgccagtattgagaaatattacaaatgaagttttgcagacaaaagcaaaa
cagcagttgactgaaaagccagctttcttagtaaagaaccttaaaccaagtcctgcagtg
aaccttcgaaccgggaaagcagagttcactcaacatcctgagaaagaaaatgaaggggac
attacaatttttcctgaaagtttgcaaccttctgaaacgctaaagcagatgaatagcatg
aattcagtaggcaccttcttagatgtaaaacgtctcagacagttaccaaaattattttaa

>gi568815597f:47233946_47476742|GENSCAN_predicted_peptide_3|228_aa
MLSRCRSGLLHVLGLSFLLQTRRPILLCSPRLMKPLVVFVLGGPGAGKGTQCARIVEKYG
YTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNK
FLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESL
EKRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQIFDKEG

>gi568815597f:47233946_47476742|GENSCAN_predicted_CDS_3|687_bp
atgctgagccgctgccgcagcgggctgctccacgtcctgggccttagcttcctgctgcag
acccgccggccgattctcctctgctctccacgtctcatgaagccgctggtcgtgttcgtc
ctcggcggccccggcgccggcaaggggacccagtgcgcccgcatcgtcgagaaatatggc
tacacacacctttctgcaggagagctgcttcgtgatgaaaggaagaacccagattcacag
tatggtgaacttattgaaaagtacattaaagaaggaaagattgtaccagttgagataacc
atcagtttattaaagagggaaatggatcagacaatggctgccaatgctcagaagaataaa
ttcttgattgatgggtttccaagaaatcaagacaaccttcaaggatggaacaagaccatg
gatgggaaggcagatgtatctttcgttctcttttttgactgtaataatgagatttgtatt
gaacgatgtcttgagaggggaaagagtagtggtaggagtgatgacaacagagagagcttg
gaaaagagaattcagacctaccttcagtcaacaaagccaattattgacttatatgaagaa
atggggaaagtcaagaaaatagatgcttctaaatctgttgatgaagtttttgatgaagtt
gtgcagatttttgacaaggaaggctaa

>gi568815597f:47233946_47476742|GENSCAN_predicted_peptide_4|313_aa
MDPPAAFSGFPALPAVAPSGPPPSPLAGAEPGREPEEAAAGRGEAAPTPAPGPGRRRRRP
LQRGKPPYSYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQNSIRHNLTLN
DCFVKVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRRKRFKRAELPAHAAAAPGPPLPF
PYAPYAPAPGPALLVPPPSAGPGPSPPARLFSVDSLVNLQPELAGLGAPEPPCCAAPDAA
AAAFPPCAAAASPPLYSQVPDRLVLPATRPGPGPLPAEPLLALAGPAAALGPLSPGEAYL
RQPGFASGLERYL

>gi568815597f:47233946_47476742|GENSCAN_predicted_CDS_4|942_bp
atggatccgcccgccgcgttctctggcttccctgccctgccagcggtcgcgccgtcgggg
ccgccgccgtcgccgctcgcaggagccgagccagggcgggagccagaggaggcggcggct
ggccgcggagaggcggcccccacgcccgcgcccggcccggggcggcggcggcggcggccc
ctgcagcgcgggaagccgccctactcgtacatcgcgctcatcgccatggctctggcgcac
gccccgggccgccgcctcacgctggccgccatctaccgcttcatcaccgaacgctttgcc
ttctaccgcgacagcccgcgcaagtggcagaacagcatccgccacaatctcacgctcaac
gactgcttcgtcaaggtgccccgcgagccgggcaacccgggcaagggcaactactggacg
ctggaccccgcggccgcagacatgttcgacaacggcagcttcctgcggcgccgcaagcgc
ttcaagcgcgccgagctgcccgcgcacgcggccgcggcgccagggccgccgctccccttc
ccctacgcgccctacgcgcccgcgcccggccccgcgctgctggtgccgccgccttctgcc
ggaccgggcccctcgccgcccgcgcgtctgttcagcgtcgacagcctggtgaacctgcag
ccggagctagcggggctgggcgcccccgagccgccctgctgcgccgcgcccgacgccgca
gccgcagccttcccgccctgcgctgccgccgcctccccgccactctactcgcaggtcccc
gaccgcctggtactgcccgcgacgcgccccggccccggcccgctgcccgctgagcccctc
ctggccttggccgggccggcagccgctctcggcccgctcagccctggggaggcctacctg
aggcagccgggcttcgcgtcggggctggagcgctacctgtga

>gi568815597f:47233946_47476742|GENSCAN_predicted_peptide_5|571_aa
MVLEPKASGKESRFSRRERRTHAGSQALLQDAEQAEPSPAPSPPARKTHSPQRQRGRARA
AAGAEPESGGGGGSGTMTLGSCCCEIMSSESSPAALSEADADIDVVGGGSGGGELPARSG
PRAPRDVLPHGHEPPAEEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAA
RGAAGPGPGPPSGGAATRSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYY
REKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFK
RQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGP
APHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSG
PGPGPAGLPAFLGAELGCAKAFYAASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGA
GAGQRPSFSIDHIMGHGGGGAAPPGAGEGSPGPPFAAAAGPGGQAQVLAMLTAPALAPVA
GHIRLSHPGDALLSSGSRFASKVAGLSGCHF

>gi568815597f:47233946_47476742|GENSCAN_predicted_CDS_5|1716_bp
atggtgctggagcccaaggcttctgggaaagagtccaggttttcgcggagggagcgacgg
actcacgcgggatcgcaggcactgctgcaagacgccgaacaggctgagccgtcccccgcc
ccctccccgcccgcgcgcaaaacgcactcgccccagaggcagcgcggccgagcccgagcc
gctgccggagcggagccggagagtggcggcggcggcggcagcggcaccatgaccctgggc
agctgctgctgcgagatcatgtcctccgagagctccccggccgcgctgtccgaggccgac
gcagacatagacgtggtgggcggcggcagcggcgggggggagctcccagctcgctccggg
ccccgcgccccccgggacgtgctcccccacggccacgagcctcccgcggaggaagccgag
gcagacttagccgaggacgaggaggagtctggtggctgctcggacggcgagccccgcgct
ctggcgtcccggggggcggcggccgcagcggggagcccggggccaggcgccgcggcggcc
cgcggcgcagcggggcccgggccgggaccgccgtcggggggcgcggcgacgcggagcccg
ctggtgaagccgccctactcgtacatcgcgctcatcaccatggccatcctgcagagcccc
aagaagcggctgacgttgagcgagatctgcgagttcatcagcggccgcttcccctactac
cgggagaagttccccgcctggcagaacagcatccgccacaacctctctctcaacgactgc
ttcgtcaagatcccccgcgagccgggcaacccgggcaagggcaactactggacgctggac
ccggagtcggccgacatgttcgacaacggcagcttcctgcggcgtcgcaagcgcttcaag
cggcagcccctgccgccgccgcacccacacccgcaccctcacccggagctgctgctgcgt
ggcggggccgcggcggcgggggatcccggcgctttcctgcccggcttcgctgcctacggc
gcctacggctacggctacgggctggctctcccggcctacggcgcacccccgccggggccg
gccccgcatccgcacccgcacccgcacgccttcgctttcgccgcggcagccgccgccgct
ccttgccagctgtcggtacccccaggccgcgccgccgcgcctccacccggacctccgacg
gcctcggtgttcgcaggcgcgggatcggccccagctcctgcgcctgcctcaggctcgggc
ccgggcccgggccccgcaggcctgcccgccttcctgggcgcggagctgggctgcgccaaa
gccttctacgcggcgtccctgagtcctcccgcagccggcaccgcggcgggtctgcccacc
gcacttctgcgccagggcctcaagacggacgcgggcggtggtgcaggcggcgggggcgcc
ggggcagggcagaggccttccttctctatagaccacatcatgggccacggtggcggcggg
gcagcacccccgggcgccggcgagggctctccgggaccgccattcgcggcagccgcgggt
cctgggggccaagcccaggtcttggccatgctgactgctccggccctggctcccgttgct
ggccacattcgcctctcgcatcccggggacgcgctgctgtcctcagggtcccggtttgcc
agcaaagtcgccggccttagtggctgccacttctga

>gi568815597f:47233946_47476742|GENSCAN_predicted_peptide_6|340_aa
MDEQQLIKIQRGECYARERRYIYANRQPKHTQRFGHPSMALPGKEKALGPTWKPLRSRKE
VSQAPNHSWLGQPAPSELGPKLALGYISSYRSGPGLIFPAAQTICCVTPARRNAKSRTAS
DFRSESAWSEKTALRRDPGLEAESRGSARNNPEGDGAECSTGALRRKPPSFPTSPAVRSL
QASGAASASSGSSRSATEGGGARSALRRAAPTSPRKNPFPKLELETSVLSTGSLLVRVCA
DLKEQSNSAPKNPINICFAHKRFRRMSYPARPLPIFSFLSTFLQSAKPQSVSHRDKCGLD
VIFLVGPPERLPRPQPTQHFDARIGIKLGANPNWPRFSLA

>gi568815597f:47233946_47476742|GENSCAN_predicted_CDS_6|1023_bp
atggacgagcagcaattaattaaaattcagcgtggcgagtgctatgcaagagagaggagg
tacatttatgcaaaccggcaaccaaaacatacacagagatttggccacccctccatggcc
ctgccagggaaggaaaaagccctgggtcccacgtggaagcctcttagatccagaaaggaa
gtgagccaagctcccaaccatagctggctggggcagccggcacccagtgaactgggacca
aagctggccttaggatacatatcctcataccgttcgggtccagggctcatcttcccagct
gcacaaactatctgctgtgtgacccccgccaggagaaatgcaaagtcgcggacagcgagc
gacttccgctcagagtccgcgtggagcgaaaagacagcgctccgcagggacccaggactc
gaggctgagagcagagggagcgccagaaacaacccagaaggtgacggtgcggagtgcagc
accggggcgctgcggaggaaaccgccttccttccccactagtccagcagtccgaagcctc
caggcctccggagcggcctcagcctcgagcggcagctctcgctccgctacggaaggaggc
ggtgcccgctccgccctgcgccgcgccgcgcccactagcccgcggaaaaatccgttcccg
aaactagagctggaaacctctgtcctgtctacaggttctctgctggtacgtgtctgcgcc
gaccttaaagaacagagtaattccgctccaaaaaacccaatcaacatttgttttgctcac
aaacgctttaggaggatgagttatcctgcccgaccactgcccatctttagttttctttca
acgtttctccagagcgccaaacctcagagcgtcagccacagagacaaatgtgggctggat
gtcatcttcctggttggccctcctgaacgcctccccaggccccagcctacacaacatttt
gacgcgcgtatcggaattaagttaggcgcaaacccaaactggccccgcttttctttggct
tga