GENSCAN 1.0	Date run:  4-Nov-116	Time: 12:34:59

Sequence gi568815594r:119960121_120166734 : 206614 bp : 36.64% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 PlyA -    586    581    6                               1.05
 1.06 Term -   4780   4656  125  2  2   44   34   110 0.041  -1.23
 1.05 Intr -  21352  21281   72  2  0   71  101    44 0.181   2.46
 1.04 Intr -  36303  36185  119  2  2    5  109   145 0.003   7.49
 1.03 Intr -  46316  46171  146  2  2   97   79   139 0.849  12.06
 1.02 Intr -  51336  51221  116  1  2   49   75   126 0.964   6.65
 1.01 Init -  51567  51429  139  0  1   70   89    84 0.628   7.06
 1.00 Prom -  52120  52081   40                              -5.55

 2.13 PlyA -  52519  52514    6                               1.05
 2.12 Term -  56484  55798  687  0  0   64   42   199 0.001   5.52
 2.11 Intr -  66880  66796   85  0  1   23   84    63 0.003  -1.70
 2.10 Intr -  72651  72557   95  0  2   49   98   110 0.039   5.94
 2.09 Intr -  90008  89858  151  1  1   47   27   125 0.020   1.54
 2.08 Intr -  93527  93259  269  2  2   48   92    84 0.552   0.21
 2.07 Intr - 100170 100040  131  1  2   69   33   139 0.063   5.99
 2.06 Intr - 100857 100754  104  2  2   77   89   106 0.997   8.50
 2.05 Intr - 101975 101855  121  0  1   46   99   104 0.947   5.93
 2.04 Intr - 105698 105552  147  0  0   95   63   147 0.953  12.19
 2.03 Intr - 106876 106542  335  0  2   10   84   214 0.229   7.49
 2.02 Intr - 107370 107247  124  1  1   95  -21   170 0.236   5.52
 2.01 Init - 141382 141241  142  1  1   64   81    64 0.359   3.64
 2.00 Prom - 147575 147536   40                              -3.65

 3.03 PlyA - 148339 148334    6                               1.05
 3.02 Term - 157932 157516  417  0  0   13   43   221 0.702   4.39
 3.01 Init - 158551 158345  207  1  0   39   47   136 0.271   3.47
 3.00 Prom - 160792 160753   40                              -4.65

 4.00 Prom + 164300 164339   40                              -8.15
 4.01 Sngl + 166375 167391 1017  0  0   37   38   345 0.980  21.17
 4.02 PlyA + 167572 167577    6                               1.05

 5.03 PlyA - 168369 168364    6                               1.05
 5.02 Term - 179022 178753  270  0  0   54   43   198 0.199   6.40
 5.01 Intr - 182568 182397  172  2  1   53   68    88 0.025   2.32

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  33945  34143  199  2  1   72  107    74 0.831   6.82
S.002 Sngl -  56520  55798  723  0  0   61   42   222 0.932  10.87
S.003 Term - 100170  99998  173  1  2   69   55   185 0.927  10.31


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:119960121_120166734|GENSCAN_predicted_peptide_1|238_aa
MLLPQEPGCSTSSSTLQEPFQEQPSPDIEGGFILKPRQPARGQQGSEEGGQYRQEANTCP
ESDLEKPEMSEVKAQLTSRKISFMCVSIVQFLIENCLSIFGEDITSLLEKSSMTCDNSDA
SGTLKNSVGFDEKQGLPRRSGSVNLQPLSREDLGRSQSESLGPEFQGLWEWLPGLFRAEL
RLSALNSSSQNANCPYKYILTILKKNTGFGKRDHETLSRKTFMDQGLMAKTVITFTPT

>gi568815594r:119960121_120166734|GENSCAN_predicted_CDS_1|717_bp
atgctcctgccacaggaaccagggtgctccacctcttcttccacactccaggagcccttc
caggagcagccatccccagacatagaaggcgggttcattctgaagcccaggcagccagcc
agaggccagcaggggagtgaggaaggaggacagtataggcaggaagccaatacctgtcca
gaatcagacttagagaaacctgaaatgtctgaagtcaaggcccaacttacttctaggaag
atttctttcatgtgtgtttctattgtacaatttctcattgaaaactgcctcagcatattt
ggagaagacatcacttccctcttggagaagagctcaatgacttgtgacaacagtgatgct
tcaggtaccttgaaaaattcagttggttttgatgagaaacaggggcttccgaggcgatcg
ggcagtgtcaatcttcagccgctaagccgagaagatctgggaaggagtcagtcagagagc
cttgggccagagttccaggggctctgggagtggctgccaggtttgtttagagcagaactg
aggctttcagcactaaattcaagctctcaaaatgccaactgcccatacaaatatattttg
accatcctgaagaaaaatacaggatttggcaagcgtgaccatgaaactctttctagaaaa
accttcatggatcaaggattaatggcaaaaactgtaattactttcacaccaacataa

>gi568815594r:119960121_120166734|GENSCAN_predicted_peptide_2|796_aa
MDMKRGDSDEGSERKEKSYRESIHLLREYTNNCKQNVGKNMDYKGHSGWAGWTERSLDFR
TQPPTAPDSPTPLASEEGPKPRTDVEKGHVTPGTARPGPPTAPARTGRSRDITGRLRERA
GPRCVGLGLKARRACAKDLTTCCVVTFETLGGEVLLEPLWLLSAEWKRVLLFVSLAMALQ
LSREQGITLRGSAEIVAEFFSFGINSILYQRGIYPSETFTRVQKYGLTLLVTTDLELIKY
LNNVVEQLKDWLYKCSVQKLVVVISNIESGEVLERWQFDIECDKTAKDDSAPREKSQKAI
QDEIRSVIRQITATVTFLPLLEVSCSFDLLIYTDKDLVVPEKWEESGPQFITNSEEVRLR
SFTTTIHKEEALHAELPRAKLESTVLELLQAMEKFLLCCLGWAERKSGERAPERYSSAVF
CHQDWNRNPKSGVTSIPPAICQLFHLLVYYSVCSTGIITCLETGPERVTIISSYGQQRAA
KGSGVRACSQGLGILHFVEAKIRNWEVENNSISKPDDSGEKKGKGKNDEGTILQRKSFRR
YINLAKEKDHPKNIPLQIFTEDIKKCASETHLTHKDSHKLKVKGWKKAFHANGHQKQAGV
AILTSDKTNFKATAVKRDKAGHYLLVEDLVPQENITTLNIYTPKTGAPKFIKQLLIDRRN
EIDSNTIIVGDFSTPLTALDRSSRQKVNKETMDLNYALVQMDLTNIYRTFHPTNTEYTFY
SAAYGTFSKIDHMIGHKMSLNKFQKIEIMSSALSDHKRIKLEVNSKRNLQNHANTWKLNN
LLLNEHWVKNKIKMEI

>gi568815594r:119960121_120166734|GENSCAN_predicted_CDS_2|2391_bp
atggacatgaaaaggggagattctgatgagggatcagaaagaaaagagaagagctataga
gaaagcatccatcttcttagagaatacacaaataattgtaaacagaatgttggcaaaaat
atggattacaaaggccattctgggtgggcagggtggacagaacgcagcctggacttccgg
acgcagccccctaccgccccggactcgcctacccctctggcctctgaggagggccctaag
cccaggacagacgtggaaaaagggcatgtcacacccggcacagcgcgaccaggtccacca
actgcgcctgcgcgaaccggccgctcccgcgacatcacaggaaggctgagagaaagggca
ggtccccgctgcgtggggctgggcttaaaggctcgtcgcgcctgcgcaaaggacctgacg
acgtgctgcgtcgttacttttgaaacgcttggcggggaagtgctgttggagccgctgtgg
ttgctgtccgcggagtggaagcgcgtgcttttgtttgtgtccctggccatggcgctgcag
ctctcccgggagcagggaatcaccctgcgcgggagcgccgaaatcgtggccgagttcttc
tcattcggcatcaacagcattttatatcagcgtggcatatatccatctgaaacctttact
cgagtgcagaaatacggactcaccttgcttgtaactactgatcttgagctcataaaatac
ctaaataatgtggtggaacaactgaaagattggttatacaagtgttcagttcagaaactg
gttgtagttatctcaaatattgaaagtggtgaggtcctggaaagatggcagtttgatatt
gagtgtgacaagactgcaaaagatgacagtgcacccagagaaaagtctcagaaagctatc
caggatgaaatccgttcagtgatcagacagatcacagctacggtgacatttctgccactg
ttggaagtttcttgttcatttgatctgctgatttatacagacaaagatttggttgtacct
gaaaaatgggaagagtcgggaccacagtttattaccaattctgaggaagtccgccttcgt
tcatttactactacaatccacaaagaggaagccttgcatgctgaattgccaagggcaaaa
ttagaaagcactgtactcgagctgctacaagccatggaaaaatttcttctttgctgcttg
ggatgggctgagagaaaaagtggagagagggccccagaacgttactccagtgctgttttc
tgtcatcaggattggaacagaaaccctaagagtggagtaacaagcatccctcctgctatt
tgccagctttttcatctcttggtatattacagtgtgtgttccactggcattattacctgc
cttgagacagggcctgaaagagtaaccatcatttccagttatggtcagcagagggcagca
aagggcagtggagtacgtgcttgctctcagggcctgggcatccttcactttgtggaggca
aaaatcaggaactgggaagtagagaataattccatcagcaaacctgatgactctggggaa
aagaagggcaagggcaagaatgatgaagggactattcttcaacgcaagagctttagaagg
tacataaatctagccaaagaaaaggaccacccgaagaacattccccttcaaatcttcact
gaggacatcaagaaatgtgcctctgagactcacctaacacataaggattcacataaactt
aaagtaaaagggtggaaaaaggcatttcatgcaaatggacaccaaaagcaagcaggggta
gctattcttacatcagacaaaacaaattttaaagcaacagcagttaaaagagacaaagcg
ggacattatttgctagtagaagatcttgtcccacaggaaaatatcacaaccctaaacata
tacacacctaaaactggagctcccaaatttataaaacaattactaatagaccgaagaaat
gagatagacagcaacacaataatagtgggggacttcagtactccactgacagcactagac
aggtcatcaagacagaaagtcaacaaagaaacaatggatttaaactatgccttggtacaa
atggacttaacaaatatatacagaacatttcatccaacaaacacagaatacacattctat
tcagcagcatatggaactttttctaagatagaccatatgataggccataaaatgagcctc
aataaatttcagaaaattgaaatcatgtcaagtgctctctcagatcacaagagaataaaa
ttggaagtcaactccaaaaggaaccttcagaaccatgcaaatacatggaaattaaataac
ctgctcctgaatgaacattgggtcaaaaacaaaatcaagatggaaatttaa

>gi568815594r:119960121_120166734|GENSCAN_predicted_peptide_3|207_aa
MDNEIQTEMVSDGEEKLVGNWSKGNSCYVLAKRLAAFCPCPKDLWNFELERDDLRYLVEE
ISKWQNMQELPRGVEPASAQKSKIGVWEPLTRFQQMYGNAWMPRQKFAVGVGSSWRTYAR
AMWKAYVGLVLPHGVPTGAPPNGTVRRGPPSSRPQNGRSTDSLHYAPGRAADTQCQPCEH
SQEEGCSLQSHRGRAAQDHGNPPLALE

>gi568815594r:119960121_120166734|GENSCAN_predicted_CDS_3|624_bp
atggacaatgaaatccagactgagatggtctcagatggagaagagaaacttgttgggaac
tggagcaaaggtaactcctgttatgttttagcaaaaagactggcagcattttgcccctgt
cctaaagatttgtggaactttgaacttgagagagatgacttaaggtatctggtggaagaa
atttctaagtggcaaaacatgcaagagcttccacgtggtgttgagcctgcaagtgcacag
aagtcaaaaattggggtttgggaacctctgactagatttcagcagatgtatggaaatgca
tggatgcccaggcagaagtttgctgtaggggtggggtcctcatggagaacctatgctagg
gcaatgtggaaggcatatgtggggttggtgctgccacatggagtccctactggggcaccg
cctaatggaactgtgagaagagggccaccatcctccagacctcagaatggtagatccact
gacagcttgcactatgcacctggaagagctgcagacactcaatgccagccctgtgaacac
agccaagaggaaggctgttccctgcaaagccacaggggcagagctgcccaagaccatggg
aacccacctcttgcattagagtga

>gi568815594r:119960121_120166734|GENSCAN_predicted_peptide_4|338_aa
MNIDAKILNKILANQIQQHVKKLIHHDQVGFIPGMQGWFNICKSINVIQHINRTKDKNHI
IISIDAEKAFDKIQQPFMLKTLSKLGIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLNT
GTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADEMIVYLENPIVSA
QNLLKLISNFSKVSGYKINVQKSQAFLYTNNRLTESQIMSELPFRVASKRIKYLGIQLTR
DVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRSNAIPIKLPMT
FFTEFEKNYFRVHMEPKKSPHHQVNPKQKEQSWRHHTT

>gi568815594r:119960121_120166734|GENSCAN_predicted_CDS_4|1017_bp
atgaacattgatgcaaaaatcctcaataaaatactggcaaaccaaatccagcagcacgtc
aaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaac
atatgcaaatcaataaatgtaatccagcatataaacagaaccaaagacaaaaaccacatc
attatctcaatagatgcagaaaaggcctttgacaaaattcaacaacccttcatgctaaaa
actctcagtaaattaggtattgatgggacgtatctcaaaataataagagctatctatgac
aaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaacact
ggcacaagacagggatgccctctctcaccactcctgttcaacatagtgttggaagttctg
gccagggcaattaggcaggagaaggaaataaaaggtattcaattaggaaaagaggaagtc
aaattgtccctgtttgcagatgagatgattgtatatctagaaaaccccattgtctcagcc
caaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgta
caaaagtcacaagcattcttatacaccaataacagactaacagagagccaaatcatgagt
gaactcccattcagagttgcttcaaagagaataaaatacctaggaatccaacttacaagg
gatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggat
acaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatg
gccatactgcccaaggtaatttatagatccaatgccatccccatcaagctaccaatgact
ttcttcacagaatttgaaaaaaactactttagagttcatatggaaccaaaaaagagccca
catcaccaagtcaatcctaagcaaaaagaacaaagctggaggcatcacactacctga

>gi568815594r:119960121_120166734|GENSCAN_predicted_peptide_5|147_aa
XREQPLKPICGLFSKRSQPVVSIVQGPMGIDPWITGSLPITQKEVVLVSPTSLRMIVLPS
TKIVRLLQPNGKFKLTSFLCKLPGPRYVFISSIKMDYSSKLVPIEWGIAEKIPKNVEATL
ELGNRQRLEESGGLRRREKNVGKFGTS

>gi568815594r:119960121_120166734|GENSCAN_predicted_CDS_5|444_bp
nnaagggagcagcctctgaagcccatctgtggattattcagcaaaaggagccagcctgta
gtgtcaattgtgcaaggccccatgggaattgacccctggattacaggttccctgccaatc
acccaaaaagaggtggttcttgttagccccacatccctcagaatgatagtgctgccttcc
accaagattgtgaggcttctccagccaaatggcaagttcaagttaacctctttcttatgt
aaattgcccggtccccggtatgtctttatcagcagcataaaaatggattattccagtaaa
ttggtacctatagagtggggcattgctgaaaagatacccaaaaatgtggaagcaactttg
gaactgggtaacaggcagaggttggaagagtctggagggctcagaagaagagagaaaaat
gtgggaaagtttggaacttcctag