GENSCAN 1.0	Date run:  4-Nov-116	Time: 12:35:01

Sequence gi568815584f:60679978_60880592 : 200615 bp : 37.94% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    980    975    6                               1.05
 1.02 Term -   8900   8716  185  0  2   35   44   234 0.839  10.42
 1.01 Init -  16311  16263   49  0  1   86   58    40 0.433  -0.04
 1.00 Prom -  30830  30791   40                              -6.35

 2.05 PlyA -  31949  31944    6                               1.05
 2.04 Term -  34226  33430  797  0  2  100   43   573 0.946  46.45
 2.03 Intr -  40468  39729  740  0  2   80   87   410 0.630  30.25
 2.02 Intr -  42168  41776  393  2  0   -6    0   319 0.463   6.54
 2.01 Init -  44034  43235  800  0  2   35  105   867 0.556  75.32
 2.00 Prom -  44928  44889   40                              -8.45

 3.00 Prom +  50729  50768   40                              -5.15
 3.01 Sngl +  50783  51169  387  1  0   71   39   186 0.897   7.96
 3.02 PlyA +  51848  51853    6                               1.05

 4.03 PlyA -  52604  52599    6                               1.05
 4.02 Term -  54998  54689  310  1  1  116   49   326 0.983  25.05
 4.01 Init -  61898  61825   74  2  2   59   92    20 0.572   0.09
 4.00 Prom -  75838  75799   40                              -3.15

 5.00 Prom +  76841  76880   40                              -2.85
 5.01 Init + 100001 100280  280  1  1   97   65   262 0.642  22.02
 5.02 Term + 100473 100618  146  1  2   41   49   103 0.360  -1.21
 5.03 PlyA + 102868 102873    6                               1.05

 6.00 Prom + 108908 108947   40                              -7.05
 6.01 Init + 111657 111724   68  2  2   48   97    55 0.976   3.00
 6.02 Intr + 116240 116392  153  2  0  116   95    97 0.983  11.47
 6.03 Intr + 118110 118183   74  0  2   70   84    69 0.986   2.83
 6.04 Intr + 128348 128451  104  0  2   78   28    86 0.980   0.57
 6.05 Intr + 132010 132150  141  0  0   56   84   180 0.997  14.03
 6.06 Intr + 138745 138870  126  0  0   60  103    56 0.576   4.26
 6.07 Intr + 143042 143173  132  1  0   74   90    35 0.461   2.22
 6.08 Term + 149132 149278  147  1  0  114   49    18 0.332  -2.58
 6.09 PlyA + 150468 150473    6                               1.05

 7.04 PlyA - 150787 150782    6                               1.05
 7.03 Term - 156319 155949  371  2  2   72   47   319 0.973  20.02
 7.02 Intr - 159555 159476   80  2  2   73  105    54 0.461   3.88
 7.01 Init - 172609 172521   89  1  2   62   91    58 0.294   3.66
 7.00 Prom - 172699 172660   40                              -4.85

 8.04 PlyA - 172816 172811    6                               1.05
 8.03 Term - 174491 174112  380  0  2   21   41   332 0.553  15.77
 8.02 Intr - 174763 174570  194  0  2   34  -20   188 0.876   0.81
 8.01 Init - 175777 175719   59  1  2  107   86    75 0.989  10.03
 8.00 Prom - 178082 178043   40                              -3.65


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 199217 199079  139  2  1   71   31   141 0.971   7.05


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:60679978_60880592|GENSCAN_predicted_peptide_1|77_aa
MGFLHVGQAGLELLTSGSWRFEQRIGQNVQQSKERMMQRKNKCRDLLQMKVRSTAWERPE
QRPKGSRYRIFSGPNNG

>gi568815584f:60679978_60880592|GENSCAN_predicted_CDS_1|234_bp
atggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggttcttggcgt
tttgaacaaagaattggacaaaatgtacagcagagcaaggaaagaatgatgcagcgaaag
aacaaatgcagagatttattgcaaatgaaagtacgctccacagcgtgggagcggccagag
cagcggcccaagggctccagatacagaatcttctccggtccaaacaacggctag

>gi568815584f:60679978_60880592|GENSCAN_predicted_peptide_2|909_aa
MESASEGQEAHREVAGGAAVGLSPPAPAPFPLEPGDAATAAARVSGEEGAVAAAAAGAAA
DQVQLHSELLGRHHHAAAAAAQTPLAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDL
LRGNESLLKARALVAFHQGIYPELYSILESHSFESANHPLLQQLWYKARYTEAERARGRP
LGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITG
LSLTQVSNWFKNRRQRDRNPSETQSKRRERIQKQLEGSSRGSKLGAGDPARLRQVKVITS
AFQSRSQPALAASGPLWGSDGSGSGVPRPRLGGRLGALSGPRGNQNKRCTGMCVRLPQIC
GEVQRRRFGYAEPPALRPLEAADPALGNQRNPQGRGRGESDGNPSTEDESSKGHEDLSPH
PLSSSSDGITNLSLSSHMEPVYMQQIGNAKISLSSSGVLLNGSLVPASTSPVFLNGNSFI
QGPSGVILNGLNVGNTQAVALNPPKMSSNIVSNGISMTDILGSTSQDVKEFKVLQSSANS
ATTTSYSPSVPVSFPGLIPSTEVKREGIQTVASQDGGSVVTFTTPVQINQYGIVQIPNSG
ANSQFLNGSIGFSPLQLPPVSVAASQGNNLIWYLNAPANVFISCCNISVSSSTSDGSTFT
SESTTVQQGKVFLSSLAPSAVVYTVPNTGQTIGSVKQEGLERSLVFSQLMPVNQNAQVNA
NLSSENISGSGLHPLASSLVNVSPTHNFSLSPSTLLNPTELNRDIADSQPMSAPVASKST
VTSVSNTNYATLQNCSLITGQDLLSVPMTQAALGEIVPTAEDQVGHPSPAVHQDFVQEHR
LVLQSVANMKENFLSNSESKATSSLMMLDSKSKYVLDGMVDTVCEDLETDKKELAKLQTV
QLDEDMQDL

>gi568815584f:60679978_60880592|GENSCAN_predicted_CDS_2|2730_bp
atggaaagcgcctcggaagggcaggaggcgcaccgagaagtggcggggggcgcggcggta
gggctgagccccccggctccagccccttttcccctggagccgggggacgccgcgaccgct
gccgccagggtgagcggagaggaaggggcagtggcggcggcggcggccggagcggcggcg
gatcaggtacaactccactcggaacttctgggcaggcaccaccacgccgccgccgccgcc
gcgcagaccccgctggccttctcgcccgaccacgtcgcctgcgtgtgcgaggcactgcag
caggggggcaacctggaccgcctggcccggttcctgtggtccctgccccagagcgacctg
ctacgtggcaacgagagcctgctgaaggcgcgggcgctcgtggccttccaccagggcatc
taccccgagctctacagcatcctcgagagccacagcttcgagtcggccaaccacccgctg
ctgcagcagctctggtacaaggcgcgctacaccgaggccgagcgagcccgcggccggccg
ctgggagccgtagacaagtaccggctgcgcaggaaattccccctgccccgcaccatctgg
gacggcgaggagacggtgtattgtttcaaggagaagtcgcgcaacgcgctcaaggagctc
tacaagcagaatcgctacccttcgcccgccgagaagcggcacctggccaagatcaccggc
ctctccctcacccaggtcagcaactggttcaagaaccgccggcagcgcgacaggaacccc
tccgagacccagtccaaaaggagagaaagaatccaaaagcagctcgaaggttcttctcgg
ggaagcaaactgggagccggggatccagcccgcctgcgccaggtgaaggtgatcaccagc
gcattccagagccggtctcagcccgcccttgccgcttctgggcccctgtgggggtccgac
ggctcgggctccggcgttcctcgcccaaggctgggagggaggcttggtgccctatccggc
cctcgcggtaaccaaaacaaaaggtgcaccgggatgtgcgtgcgccttccgcagatatgc
ggagaggtccagagaaggcgctttggttacgccgagccacctgccctgcgcccactagag
gccgcggatcccgcgctcggaaaccaacggaatccgcagggccggggcagaggtgagtca
gatggcaaccccagcactgaagatgaatccagcaagggacatgaggatttatctcctcac
ccactctccagttcatctgatggcatcaccaacctcagcctttccagtcatatggagcca
gtatatatgcaacaaattggaaatgctaagatatcattaagctcttctggagttctgttg
aatggaagcttggtacctgcaagtacttcacctgtcttccttaatggaaattcttttatt
cagggacccagtggagttatccttaatggattaaatgtgggaaatacacaggcagtggca
ttgaacccaccaaaaatgtcatcaaacattgtgagcaatggtatatccatgactgacata
ctggggtctacttcccaggacgtgaaggaattcaaagtcctccagagttctgctaactca
gcaaccaccacgtcctacagccccagtgtccctgtctcattcccaggcctgatacccagc
actgaggtgaaaagagaaggcattcaaacagtggcttcccaagatggagggtctgtagtg
acttttactacaccagtgcaaattaaccagtatggcattgtccagatccccaattccgga
gcaaacagccagttccttaatgggagcattggattctctccactgcagctgccccctgtg
tcagtggcagcttcacaaggtaacaatctcatttggtaccttaatgcaccagcaaatgtg
ttcatcagctgctgtaatatctcagtaagctcaagcacttcagatggaagcacatttaca
agtgagtctaccacagtccagcaaggaaaggttttcttgagctctcttgctcccagtgca
gtggtatacacggttcctaatacaggccagactataggatctgtgaaacaggaaggcttg
gaaaggagcctggtattttctcagttgatgcctgtcaatcagaatgcacaagtaaatgca
aacctgtcttctgaaaacatctcggggagtggcctgcatccactggcctcctcattagtt
aatgtatctccaactcacaatttttctctcagtccctctacactactaaatcccactgag
ctaaaccgcgacattgccgatagccaaccaatgtctgcaccggtggcaagcaaatctact
gtgacatctgtcagcaacactaactatgcaactcttcagaactgctcccttattactggt
caagacctattgtcagtccctatgactcaggctgcccttggggaaatagttcctacagct
gaagatcaggtaggtcacccctccccagcagtacatcaggattttgtccaagaacatcgt
ttggttctgcaatcggtagctaacatgaaagagaatttcttatcaaattctgagagcaaa
gcaacaagtagcttaatgatgctggactctaaatccaagtatgtcttagatggcatggtt
gatactgtctgtgaagacctggaaacagacaaaaaagagcttgccaagctccagactgtc
cagctggatgaagatatgcaagacttatga

>gi568815584f:60679978_60880592|GENSCAN_predicted_peptide_3|128_aa
MGKDFMTKTPKAMATKAKIDKWDLMKLKSFCTAKETTIRMNRQPTDWEKIFGIYSSDKGL
ISRIYKELKQIYKKKVKQPHQKVDKGYEQTLFQRRDLCSQQTHETMLIITGHQRNANQNH
NEIPPHTS

>gi568815584f:60679978_60880592|GENSCAN_predicted_CDS_3|387_bp
atgggcaaggacttcatgactaaaacaccaaaagcaatggcaacaaaagctaaaatagac
aaatgggatctaatgaaactaaagagcttctgcacagcaaaagaaactaccatcagaatg
aacaggcaacctacagactgggagaaaatttttggaatctactcatctgacaaagggcta
atatccagaatctacaaagaacttaaacaaatttacaagaaaaaagtcaaacaaccccat
caaaaagtggacaaaggatatgaacagacacttttccaaagaagagatttatgcagccaa
cagacacatgaaacaatgctcatcatcactggtcatcagagaaatgcaaatcaaaaccac
aatgagataccacctcacaccagttag

>gi568815584f:60679978_60880592|GENSCAN_predicted_peptide_4|127_aa
MARPSEVESPRDRHKLVESKWMGARESTAAQLTECVRTHSPSASRRGSDIWWSYTEGNPD
RPWRFPSYRLSQAPVSARATYKPPQTRPSRFLPTGAWQRRSLRERAPARGEALQHKRSGS
QFPRSCI

>gi568815584f:60679978_60880592|GENSCAN_predicted_CDS_4|384_bp
atggcaagacccagtgaagtagagtctcccagagacagacacaaattggttgaaagtaaa
tggatgggggccagggaatccactgccgcccaactcacagagtgtgtccgcacacattca
ccatcagcttcaaggaggggttccgatatttggtggtcttacaccgagggcaaccctgat
cgtccatggcggtttccctcctacagactctcgcaggcgcctgtttcagccagagccacc
tacaagccccctcagacgcgaccaagcaggttcctaccaacaggcgcttggcagagacgg
tcccttcgcgaaagagcaccggcaaggggcgaggcgctgcaacacaaacgttccggcagt
cagttcccccggtcttgcatctag

>gi568815584f:60679978_60880592|GENSCAN_predicted_peptide_5|141_aa
MALQLSREQGITLRGSAEIVDEFFSFGINSILYQRGIYPSEIFTRVQKYGLTLLVTTDLE
LIKYLNNVVEQLKDWLYKCSVQKLVVVISNIESDKDLVVPEKWEESGPQFITNSEEVCLC
SFTTTIHKVNSMVAYKIPVND

>gi568815584f:60679978_60880592|GENSCAN_predicted_CDS_5|426_bp
atggcgctgcagctctcccgggagcagggaatcaccctgcgtgggagtgccgaaatcgtg
gacgagttcttctcattcggcatcaacagcattttatatcagcgtggcatttatccatct
gaaatctttactcgagtgcagaaatacggactcaccttgcttgtaactactgatcttgag
ctcataaaatacctaaataatgtggtggaacaactaaaagattggttatacaagtgttca
gttcagaaactggttgtagttatctcaaatattgaaagtgacaaagatttggttgtacct
gaaaaatgggaagagtcgggaccacagtttattaccaattctgaggaagtctgcctttgt
tcatttactactacaatccacaaagtaaatagcatggtggcctacaaaattcctgtcaat
gactga

>gi568815584f:60679978_60880592|GENSCAN_predicted_peptide_6|314_aa
MIIVDKVNWIPWLIGLKSMYANNCESCVDLLFVRGAGNCPECGTPLRKSNFRVQLFEDPT
VDKEVEIRKKVLKIYNKREEDFPSLREYNDFLEEVEEIVFNLTNNVDLDNTKKKMEIYQK
ENKDVIQKNKLKLTREQEELEEALEVERQENEQRRLFIQKEEQLQQILKRKNKQAFLDEL
ESSDLPVALLLAQHKDRSTQLEMQLEKPKPVKPVTFSTGIKMSVGITLCPAEEHTFNDER
SFNLSSSWSKFNKPPSTLPFKVLDEERLVELKVPNTLITKLVPFAISPCSEAIQDHPAIL
LAYKKTPFWRLQTF

>gi568815584f:60679978_60880592|GENSCAN_predicted_CDS_6|945_bp
atgattatcgtagacaaagttaactggatcccgtggctaattggcttgaaatccatgtat
gcaaataactgtgaaagttgtgtagatttactgtttgtgagaggagctggaaactgccct
gagtgtggtactccactcagaaagagcaacttcagggtacaactctttgaagatcccact
gttgacaaggaggttgagatcaggaaaaaagtgctaaagatatacaataaaagggaagaa
gattttcctagtctaagagaatacaatgatttcttggaagaagtggaagaaattgttttc
aacttgaccaacaatgtggatttggacaacaccaaaaagaaaatggagatataccaaaag
gaaaacaaagatgttattcagaaaaataaattaaagctgactcgagaacaggaagaactg
gaagaagctttagaagtggaacgacaggaaaatgaacaaagaagattatttatacaaaaa
gaagaacaactgcagcagattctaaaaaggaagaataagcaggcttttttagatgagctg
gagagttctgatctccctgttgctctgcttttggctcagcataaagatagatctacccaa
ttagaaatgcaacttgagaaacccaaacctgtaaaaccagtgacgttttccacaggcatc
aaaatgagtgttgggattacactgtgcccggctgaggagcacacttttaatgatgaaaga
agtttcaatctcagctcatcttggagcaaatttaataaacctccctctactctgcctttt
aaagtattggatgaagagaggttggtggaactgaaagttcccaacacactaattacaaag
ttggttccctttgcaataagcccctgttctgaggctatccaggaccacccagccatctta
ttagcatacaaaaagacaccattttggagactacaaacgttttag

>gi568815584f:60679978_60880592|GENSCAN_predicted_peptide_7|179_aa
MATKAKTDKWDLTKLKSFCMAKETIIRMNSSFSPAIHLVQSFYPTSRKNEVCGQLEGSQL
LTSKGTNWTENEFDELTEVGFTRWIITNSSELKEHDITQRKEAKNLEKRLEELLTRISSL
KKNINDLMELKNTAQELREAYKSINNQIDQGEERISEIEDQFNETKCEDEIREKNNEKE

>gi568815584f:60679978_60880592|GENSCAN_predicted_CDS_7|540_bp
atggcaacaaaagccaaaactgacaaatgggatctaaccaagctaaagagcttctgcatg
gcaaaagaaactatcatcagaatgaacagctctttcagtcccgccattcacctggtccag
agtttttatcccacatctaggaagaatgaggtatgtggacaactggaaggatcacaactc
ctcaccagcaagggaacaaactggacagagaatgagtttgatgaactgacagaagtaggc
ttcacaaggtggataataacaaactcctctgagctaaaggagcatgatataacccaacgc
aaggaagctaagaaccttgaaaaaaggttagaggaattgctaaccagaataagcagttta
aagaagaacataaatgacctgatggagctgaaaaacacagcacaagaacttcgtgaggca
tacaaaagtatcaataaccaaatcgatcaaggggaagaaaggatatcagagatagaagat
caatttaatgaaacaaagtgtgaagacgagattagagaaaaaaataatgaaaaggaatga

>gi568815584f:60679978_60880592|GENSCAN_predicted_peptide_8|210_aa
MAEQEQLQSASLSETNAEGRGQQTRHTGELRLASGRCPSGTKLPEEGAGSNLCYSAGFTG
DTQVNRVWSGPPANCSRPAEEGTDCHQLQRSKVDKSTTMRKNLRKNAENSKNQNASSSPN
DYNSSQARAQNWMENEIDELTEVGFRSWEITNSSELKEHVLTQCKKVKNLDKKLQELLTR
IPSLERNINDMMELKNTARELREAYTSINS

>gi568815584f:60679978_60880592|GENSCAN_predicted_CDS_8|633_bp
atggctgaacaggaacagctacagtctgcatctctcagtgagaccaacgcagaaggaaga
ggtcaacagacacgtcatacaggagagctcaggctggcatcaggtcggtgcccctctggg
acaaagcttccagaggaaggagcaggcagcaatctttgctattctgcgggcttcactggt
gatacccaagtgaacagggtctggagtggacctccagcaaactgcagcagacctgccgaa
gaagggactgactgtcatcagcttcaaagatcaaaggtagataaatccacgacgatgagg
aaaaacctgcgtaaaaatgctgaaaattccaaaaaccagaatgcctcttcttctccaaat
gattacaactcctctcaagcaagggcacaaaactggatggagaatgagattgatgaactg
acagaagtaggcttcagaagctgggaaataacaaactcctctgagctaaaggagcacgtt
ctaactcaatgcaagaaagttaaaaaccttgacaaaaagttacaagaactgctaactaga
atacccagtttagagaggaatataaatgacatgatggagctgaaaaacacagcacgagaa
cttcgtgaagcatacacaagtatcaatagctga