GENSCAN 1.0	Date run:  5-Nov-116	Time: 20:56:53

Sequence gi568815586r:101913111_102161962 : 248852 bp : 38.55% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    658    653    6                               1.05
 1.02 Term -   4221   4088  134  1  2  114   48    79 0.854   3.77
 1.01 Init -   5508   5202  307  0  1   66   22   191 0.723   7.80
 1.00 Prom -   8370   8331   40                              -4.95

 2.00 Prom +   9200   9239   40                              -4.75
 2.01 Init +  11196  11226   31  2  1   53   86    29 0.264  -0.85
 2.02 Intr +  11305  11468  164  2  2   46   32   159 0.333   4.87
 2.03 Intr +  11575  11756  182  0  2   71   86    86 0.586   4.44
 2.04 Term +  23372  23621  250  2  1   49   48   308 0.518  17.09
 2.05 PlyA +  24558  24563    6                               1.05

 3.04 PlyA -  27593  27588    6                               1.05
 3.03 Term -  31066  30935  132  1  0   52   46    87 0.010  -1.99
 3.02 Intr -  42540  42264  277  2  1   71   51   213 0.116  12.50
 3.01 Init -  43504  43419   86  1  2   49  113    42 0.861   3.17
 3.00 Prom -  45393  45354   40                              -9.15

 4.22 PlyA -  45721  45716    6                               1.05
 4.21 Term -  46867  46646  222  1  0   28   50   156 0.539   1.73
 4.20 Intr -  51253  51042  212  2  2   54  110   168 0.437  13.31
 4.19 Intr -  51357  51330   28  0  1  132  106    -8 0.120   2.17
 4.18 Intr -  53406  53354   53  1  2   75   78    51 0.045   0.51
 4.17 Intr -  67173  67108   66  1  0   97  105    18 0.028   2.36
 4.16 Intr -  93473  93218  256  2  1   56   43   165 0.545   4.89
 4.15 Intr - 126868 126758  111  1  0   42   91    70 0.301   2.36
 4.14 Intr - 131102 130995  108  2  0   57  111    99 0.728   8.66
 4.13 Intr - 131925 131773  153  0  0   58   76    86 0.367   3.75
 4.12 Intr - 133009 132944   66  1  0  106   81    45 0.370   3.78
 4.11 Intr - 140084 139768  317  0  2    8   53   223 0.006   5.66
 4.10 Intr - 146350 146269   82  1  1  105   61    33 0.240   0.59
 4.09 Intr - 148236 148138   99  0  0   84   92    95 0.844   8.89
 4.08 Intr - 161984 161891   94  1  1  105   95    45 0.944   5.95
 4.07 Intr - 164393 164212  182  2  2  111   80    87 0.979   7.94
 4.06 Intr - 166106 165949  158  0  2   90   78    49 0.552   2.91
 4.05 Intr - 176197 175995  203  0  2   -1   -2   227 0.107   2.81
 4.04 Intr - 186090 185996   95  0  2  106   91   102 0.749  10.14
 4.03 Intr - 187994 187922   73  1  1   83   95    52 0.859   3.89
 4.02 Intr - 199122 198998  125  0  2   49  108    96 0.979   6.16
 4.01 Init - 205408 205253  156  1  0   70   92   101 0.977   8.66
 4.00 Prom - 209516 209477   40                              -3.65

 5.03 PlyA - 209806 209801    6                               1.05
 5.02 Term - 226652 225755  898  1  1   34   40   364 0.934  17.05
 5.01 Init - 227620 226968  653  1  2   69   72   234 0.791  14.71
 5.00 Prom - 228081 228042   40                              -6.45

 6.02 PlyA - 228252 228247    6                               1.05
 6.01 Sngl - 229196 228651  546  2  0   46   42   266 0.686  13.65
 6.00 Prom - 233051 233012   40                              -5.55

 7.00 Prom + 233489 233528   40                              -5.65
 7.01 Init + 235210 235353  144  0  0   93   95    84 0.758   9.77
 7.02 Term + 238460 238801  342  1  0   46   34   288 0.950  12.73
 7.03 PlyA + 239079 239084    6                               1.05

 8.02 PlyA - 239399 239394    6                               1.05
 8.01 Term - 242923 242813  111  1  0   94   45   133 0.646   7.18

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  35457  35562  106  0  1  119  106    28 0.839   7.00
S.002 Init -  52402  52207  196  1  1   48   80   113 0.835   5.64
S.003 Term - 100082  99998   85  1  1  101   43   118 0.944   4.75


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:101913111_102161962|GENSCAN_predicted_peptide_1|146_aa
MVTVVFFDPVFIQTDRVEAHQALRASLFTLLVMVTLTHCFHARSHRGGPDQPTVGDTEQR
LPPSGTSTRGPATSRIIPEQGRWLLKIKAELWGEFLKHDISESFHYLPEFSILGNPAVSS
SHPGVPPLPLTSSPEQDSINIWLIAE

>gi568815586r:101913111_102161962|GENSCAN_predicted_CDS_1|441_bp
atggtgacagttgttttctttgatcctgttttcatccagacagatcgagtggaggcacac
caagccctccgagcgtcactcttcactctccttgtcatggtcacactcacccactgtttt
catgctaggtcacaccgaggaggacctgaccagcctacagtaggagatacagaacagagg
cttcctccttctggtaccagtaccaggggacctgccacatcccgtatcatccctgaacaa
ggaagatggcttctaaaaataaaggcagaactttggggggaatttcttaagcatgatatt
agtgaaagcttccattacctgccagagttctccatattgggaaatcctgctgtctcctct
agccaccctggtgttcctcctttacctcttacctccagtccagaacaggactcaataaac
atttggttgatagctgaatga

>gi568815586r:101913111_102161962|GENSCAN_predicted_peptide_2|208_aa
MIPDPFGLYKDSQTLASEVYVTQDSEMKRSEIQQEGEKGIRNPTRRRKGNQKSNKKGKRE
SILPQAGFPLIEVTGHLEPPDPQPIHKKRWKERTSQQFQPQAHELSPIGWLGSHAIGRSE
ALIGQTLYQMLLVVAPQAQKDELILEGNYFELASNSEALIQQAMAIENKAIRRAVGGSPV
SEKGTGPLADGCIPERLQMQRASLSVML

>gi568815586r:101913111_102161962|GENSCAN_predicted_CDS_2|627_bp
atgattccagatccatttggactttataaagattctcaaacgttagcatcagaagtttat
gtcactcaagattcagagatgaagagatcagaaatccaacaagaaggagaaaagggaatc
agaaatccaacaagaaggagaaaagggaatcagaaatccaacaagaaggggaaaagggaa
tctatattgcctcaagcaggctttcccctgatagaagtgacagggcatctagaaccccca
gacccacaacctatccacaaaaagaggtggaaagaaaggacttctcaacagttccaacca
caagcccatgaattgtctcccattggctggcttggatcacatgccattgggaggtctgag
gctctgattggtcagacgctataccagatgttgcttgttgtagctcctcaggcccaaaaa
gatgagttaatccttgaaggaaattattttgaacttgcatcaaactcagaggctttgatc
caacaggccatggcaattgaaaacaaggctatcagaagagctgtgggtggtagtcctgtc
tctgagaaaggaacagggccactggctgacggctgcattccagaacgcctccagatgcag
agggcctcacttagtgtgatgttgtga

>gi568815586r:101913111_102161962|GENSCAN_predicted_peptide_3|164_aa
MGHIWGPQAPGHGPVLVRGLLGTVPHSRSRHIIPPHVDPQSSRSGISCDAEAFRDHRKPI
LMMNPGLSLPLEQSWFHTFTSKRALNSCHVAALRFGLKQHDRHTFPESSQEWSLGSPSHS
GARSGGSEAKATLRLWPITVSSSPTPPSLLGLSGDTNQKPPTSI

>gi568815586r:101913111_102161962|GENSCAN_predicted_CDS_3|495_bp
atgggccatatctggggtccccaagccccaggtcacggaccagtactggtccgtggcctg
ttaggaactgtgccacacagcagaagcaggcacatcatcccgcctcatgtggatccccag
agcagcagatctggaatctcctgtgatgctgaggccttcagggaccacaggaaacccatc
ttaatgatgaatcctggactttctttgcccttggaacagtcctggtttcacacatttacc
tccaaaagagcacttaacagctgccacgtggctgccctgaggtttgggctgaaacaacat
gaccgtcataccttcccagagtcctcccaagaatggtctctaggttctccttcgcacagt
ggggctcgctctggaggttcagaggcaaaagccactctgaggctgtggcccatcacagtg
tcctcctcccccacaccaccttcccttttggggctttctggagacaccaatcagaagcca
cccacctccatttga

>gi568815586r:101913111_102161962|GENSCAN_predicted_peptide_4|952_aa
MKQDASRNAAYTVDCEDYVHVVEFNPFENGDSGNLIAYGGNNYVVIGTCTFQEEEADVEG
IQYKTLRTFHHGVRVDGIAWSPETRLDSLPPVIKFCTSAADMKIRLFTSDLQDKNEYKVL
EGHTDFINGLVFDPKEGQEIASVSDDHTCSEERLCLATVQSSKCEVTAFLQVYPTAPKRQ
RPSRTGHDDDGGFVEKKRGKCGEKKERSDCYCVCVERNMKDNSRSLNRFKWYSSGVLMPN
PTFLPIYHYYLHPQGFFNLIEPELKEHCLKLMVAEKNGTIRFYDLLAQQAILSLESEQVP
LMSAHWCLKNTFKVGAVAGNDWLIWDITRSRWSTISENLFATTGYPGKMASQFQIHHLGH
PQVPAIQQKRTVAFLNQFVVHTVQFLNRFSTVCEELFWLYLYSSTSLNSREKFVHQNLMK
FKGSKVGLVLGTPGVDLEPEYVGVGLGPGCTVTSLEPESAGVVLQPPSMGANLAMQSTGV
VPDSGSAGTYLDPDSPQGFVWGQLGAGASVQPGVTGARLEPEIIGAGLKLADLSLRIQQI
ETTLNILDAKEFLGVRVQGRTLNDHMDKLTLVISMAIESSPKLAKHRQMRVIDIRMNSEK
KLSSIPGLDDVTVEVSPLNVTSVTNGAHPEATSEQPQQNSTQDSGLQESEVSAENILTVA
KDPRYARYLKMVQVVAFTSGLLSLCCRWLNATTCLLPLRNPIISISTKEPSSTASYPTVN
PGLLGTASDDFIKDVDVTLSDILYYLNQESVLWALPGKNGQNPTHPFYEIQCSVLASLLI
PEFCTKIELSTNTDIEKMKVKHLFYSNLEPAPADETSEPLLLVKKGLVFSLEVQVGAAKL
IENCLSPVADNWVFGFVHTGEDIIHGLQLLGYETCGVSQLPSYERYMEKHGFVPLWTVTA
VLPAENQHQLPAIQGSHLACSSPVEPSDKCSPRQQHVGQKNHPAEPSQLTES

>gi568815586r:101913111_102161962|GENSCAN_predicted_CDS_4|2859_bp
atgaagcaagatgcctcaagaaatgctgcctacactgtggattgtgaagattatgtgcat
gtggtagaatttaatccctttgagaatggggattcaggaaacctaattgcatatggtggc
aataattatgtggtcattggcacgtgtacgtttcaggaagaagaagcagacgttgaaggc
attcagtataaaacacttcgaacatttcaccatggagtcagggttgatggcatagcttgg
agcccagagactagacttgattcattgcctccagtaatcaaattttgtacttcagctgct
gatatgaaaattagattatttacttcagatcttcaggataaaaatgaatataaggtttta
gagggccataccgatttcattaatggtttggtgtttgatcccaaagaaggccaagaaatt
gcaagtgtgagtgacgatcacacctgcagtgaggagcgcctctgcctggccactgtgcaa
tcttccaagtgtgaagtgacagcctttctgcaggtgtacccaacagctccgaagagacag
cgaccatcgagaacgggccatgatgacgatggcggttttgtcgaaaagaaaagggggaaa
tgtggggaaaagaaagagagatcagattgttactgtgtctgtgtagaaagaaatatgaaa
gataactccaggtcactcaacaggtttaaatggtacagctcaggagttttgatgccaaat
cccacattcttgccaatctaccactactatttacaccctcaaggatttttcaacttaata
gaaccagaattaaaagaacactgcttaaaactaatggttgcagagaagaatggaacaatc
cggttttatgatcttttggcccaacaggctattttatctcttgaatcagaacaagtgcca
ttaatgtcagcacactggtgcttaaaaaacaccttcaaagttggagccgttgcaggaaat
gattggttaatttgggatattactcggtccaggtggtccacaattagtgaaaatctgttt
gcaaccactggttatcctggcaaaatggcaagccagtttcaaattcatcatttaggacac
cctcaggtgccagctattcaacagaaaagaacggtggcttttctaaaccaatttgtggtg
cacactgtacagttcctcaaccgcttttctacagtttgtgaggagctgttctggctgtat
ctgtattctagtacttctttgaactctagagaaaagtttgttcatcaaaacctcatgaag
tttaaaggttccaaggtgggcctggtgcttggaacccctggggtggacctggagccagag
tatgtgggggtgggcctgggtcctggttgtactgtgactagcctggagcctgagtctgca
ggagtggtcctgcagcctccgtccatgggggccaatctggcaatgcaatctactggggtg
gtcccagactctgggtctgctggaacatacctagaccctgactcaccacagggatttgtc
tggggccagcttggtgctggggcaagtgtgcagcctggggtcacaggggccagactggag
cctgagattataggtgctggcctgaaactggcagacctttcacttcgtatccaacaaatt
gaaacaactctcaatattttagatgcaaaggaattcctgggagttagagtccaaggtcgc
acattaaatgaccatatggacaagttaaccttagttatttccatggccatagagtcatcc
ccaaagttagccaaacatcgacaaatgcgtgtcattgatatcaggatgaactcagaaaag
aagttgtcatctatcccaggcctagatgatgtcacagttgaagtatctcctttaaatgtc
accagtgtcacaaatggagcacatcctgaagccacttcagagcaaccacagcagaacagt
acacaagactctggactacaggaaagtgaagtatcagcagaaaatatcttaactgtagcc
aaggatccaagatatgccagatatctcaaaatggttcaagtggtagcatttacttcaggc
ttgctgtcactttgctgccgatggttgaatgccactacctgcctcctgccattaaggaat
cctatcatctcaattagtactaaagagcccagttctacagcatcatatcctactgtgaat
cctggcctgttgggtacagcttctgatgattttatcaaagatgttgatgtcaccctcagt
gacatcctttattatcttaatcaagagagtgttctctgggcccttcctgggaaaaatggt
caaaatcctacacatccattctatgaaatccagtgcagtgtcttagcttccctacttatt
cctgaattttgcactaaaatagagctctcaaccaatactgatatagagaagatgaaagtt
aagcatctgttttattcaaacctggaacctgctcctgcagatgaaacctcagaacccctc
cttcttgtcaaaaaggggctggtcttcagccttgaagtccaggttggggctgccaaactc
attgagaattgtctgagccctgtagctgacaattgggtgtttggctttgtacacactggt
gaagacatcatccatggactacaacttcttggctatgagacctgtggtgtgtcacagctg
ccatcctatgagaggtacatggagaagcatgggtttgtgcccttatggacggtcacagct
gtgctcccagctgaaaaccagcatcaactgccagccatacaagggagccatcttgcatgt
tccagcccagttgagccttcagataaatgcagccccagacaacagcatgtggggcagaag
aaccacccagccgagcccagtcaactcacagaatcatga

>gi568815586r:101913111_102161962|GENSCAN_predicted_peptide_5|516_aa
MKAEIKMFFETNKNKDTTHQNLWDTFKAVCRGKFIALIAHKRKQERSKIDTLTSQLKELQ
KQEQTHSKASRRQEIAKIRAQLKEIETQKTLQKINEPRSCFFERINKIDGPLVRLIKKKR
EKNQIATIKNDKGDITTNPTEIQTIIRQYYKHLYANELENLEEMDQFLDTYTLPRLNQEE
VESLNRPITGSEIEAIINSLPTKKIPGPDGFTAKFYQRTKDKNHMIISTDAEKAFHKIQQ
PFRLKTLNKLGTDGKYLKIIRANYDKATANIILNGQKLEAFPLKTCTRQGCPLSPLLVNI
VLEVLARAIRQEKEIKGIHLGKEEVKLSLFADDIIVYLENPIVSAQNLLKLISNFSSLRI
QNQCAKLTSILIHQSQTESQIMSELSFTIATKRIKYLGTQLTRDVKDLFKENYKPLLNEI
KEDTDKWKNIPCSWTGRINMVKMAILSKVIYRFNAIPMKLPMTFFTELEKTTLKFIWNQK
RAHIAKTILSKKNKAGGITLPDFKLYYKATVTKTAW

>gi568815586r:101913111_102161962|GENSCAN_predicted_CDS_5|1551_bp
atgaaggcagaaataaagatgttctttgaaaccaataagaacaaagacacaacacaccag
aatctctgggacacatttaaagcagtgtgtagagggaaatttatagcactaattgcccac
aagagaaagcaggaaagatctaaaatcgacaccctaacatcacaattaaaagaactacag
aagcaagagcaaacacattcaaaagctagcagaaggcaagaaatagctaagatcagagca
caactgaaggaaatagagacacaaaaaaccctccaaaaaatcaatgaacccaggagctgt
ttttttgaaaggatcaacaaaattgatggaccactagtaagactaataaagaagaaaaga
gagaagaatcaaatagccacaataaaaaacgataaaggggatatcaccaccaatcccaca
gaaatacaaactatcatcagacaatactataaacacctctatgcaaatgaactagaaaat
ctagaagaaatggatcaattcctggacacatataccctcccaagactaaaccaggaagaa
gttgaatccctgaatagaccaataacaggctctgaaattgaggcaataattaatagccta
ccaaccaaaaaaattccaggaccagatggattcacagctaaattctaccagagaaccaaa
gacaaaaaccacatgattatctcaacagatgcagaaaaggccttccacaaaattcaacag
cccttcaggctaaaaactctcaataaactaggtactgatgggaagtatctcaaaataata
agagctaattatgacaaagccacagccaatatcatactgaatgggcaaaaactggaagca
ttccctttgaaaacttgcacaagacagggatgccctctctcaccactcctagtcaacata
gtgttggaagttctggccagggcaatcaggcaggagaaagaaataaagggtattcattta
ggaaaagaagaagtcaaattgtccctgtttgcagatgacattattgtatatttagaaaac
cccatcgtctcagcccaaaatctccttaagctgataagcaacttcagcagtctcaggata
caaaatcaatgtgcaaaactcacaagcattcttatacaccaatcacagacagagagccaa
atcatgagtgaactctcattcacaattgctacaaagagaataaaatacctaggaacccaa
cttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaata
aaagaggacacagacaaatggaagaacattccatgctcatggacaggaagaatcaatatg
gtgaaaatggccatactgtccaaggtaatttatagatttaatgccatccccatgaagcta
ccaatgactttcttcacagaattggaaaaaactactttaaaattcatatggaaccaaaaa
agagcccacattgccaagacaatcctaagcaagaagaacaaagctggaggcatcacgctt
cctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtag

>gi568815586r:101913111_102161962|GENSCAN_predicted_peptide_6|181_aa
MRCMHKLQWLIHQVEERVSVIEDQINEMKREDKFREKRVKRNKQSLQEIWDYMKRPNLHL
IGVPESDGENGTKLENTLQDIIQENFPNLAGQANIQIQEIQRTPQRYSSRRPTPRHIIIR
FTKVELKEKMLRAAREKGQVTHKGKPIRLTADLSAETLQARRQWGPIFNILKEKNFQPRI
S

>gi568815586r:101913111_102161962|GENSCAN_predicted_CDS_6|546_bp
atgagatgcatgcacaagcttcagtggctgattcatcaagtggaagaaagggtatcagtg
attgaagatcaaattaatgaaatgaagcgagaagacaagtttagagaaaaaagagtaaaa
agaaacaaacaaagcctccaagaaatatgggactatatgaaaagaccaaatttacatctg
attggtgtacctgaaagtgacggggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaacctagcagggcaggccaacattcaaattcaggaaata
cagagaactccacaaagatactcctcgagaagaccaactccaagacacataattatcaga
ttcaccaaagttgaactgaaggaaaaaatgttaagggcagccagagagaaaggtcaggtt
actcacaaagggaagcccatcagactaacagcagatctctcggcagaaacgctacaagcc
agaagacagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatt
tcatag

>gi568815586r:101913111_102161962|GENSCAN_predicted_peptide_7|161_aa
MDVTDHYEDVRKIYDDFLKNSNMLDLIDVYQKCRALTSNCENYNTVSPGSTIQPPSERGS
LLLSRPDLLAPGEDPPVSASLTLERQKGESLLAWSWSLNFRLPGIPITVQKKRRDLKKLA
AVMRQVRQWESHPLQNIEEATWHQLTVQAEKKEPGTQGASV

>gi568815586r:101913111_102161962|GENSCAN_predicted_CDS_7|486_bp
atggacgtgactgaccattatgaggacgttaggaagatttatgatgatttcttgaagaac
agtaatatgttagatctgattgatgtttatcaaaaatgtagggctttgacttctaattgt
gaaaattataacacagtatctcctgggtcaactatacagccaccttcagaaagaggaagc
ttgctgctgtctaggccagatctcttggctcctggggaagatccaccagtgtcagcctca
ttgactctggagcggcagaagggagagtccctcttagcatggagctggtccctaaacttc
agattgcctgggattcccatcacggtccagaagaagagacgagacctgaagaagctggca
gctgtcatgcggcaagtgagacaatgggaaagccacccgcttcagaacattgaagaagcc
acctggcaccaactcactgtccaagctgagaagaaggaaccagggacccaaggagcttca
gtttaa

>gi568815586r:101913111_102161962|GENSCAN_predicted_peptide_8|36_aa
IPRNGIWGHAVSVIALLEAVGHGREPWNPATSVQLD

>gi568815586r:101913111_102161962|GENSCAN_predicted_CDS_8|111_bp
attccaaggaatggaatctggggccacgcagtgagtgttatagctctattagaagccgtg
ggtcacggaagagaaccgtggaacccagcgactagtgttcagctcgattag