GENSCAN 1.0	Date run:  5-Nov-116	Time: 20:55:00

Sequence gi568815596r:202107256_202314436 : 207181 bp : 43.30% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2333   2534  202  1  1  111   84    90 0.619   9.76
 1.02 Intr +   6081   6191  111  1  0   50  121    29 0.209   2.75
 1.03 Intr +  17935  18027   93  2  0   87  121    -2 0.385   2.94
 1.04 Intr +  28922  29047  126  0  0   29  101   107 0.734   6.75
 1.05 Intr +  31177  31253   77  2  2   89   80    36 0.461   2.13
 1.06 Intr +  47418  47555  138  2  0   93   53   140 0.644  11.66
 1.07 Intr +  58029  58101   73  2  1   58   87    67 0.171   2.58
 1.08 Intr +  64100  64261  162  0  0   35   93   110 0.234   6.15
 1.09 Intr +  72040  72255  216  2  0   11    8   187 0.086   1.48
 1.10 Intr +  77498  77588   91  0  1   96   84    44 0.534   3.85
 1.11 Intr +  79678  79843  166  1  1   43   84    12 0.353  -3.74
 1.12 Intr +  80897  81011  115  1  1   80   91   124 0.965  11.92
 1.13 Intr +  82919  83238  320  0  2  103   97    60 0.815   4.08
 1.14 Intr +  86046  86248  203  2  2   42   94   184 0.795  12.48
 1.15 Intr +  86935  87107  173  1  2   68   93   217 0.999  19.79
 1.16 Term +  89545  89795  251  2  2  117   50   317 0.939  26.67
 1.17 PlyA +  90283  90288    6                               1.05

 2.06 PlyA -  91294  91289    6                               1.05
 2.05 Term -  94538  94125  414  2  0   74   55   268 0.619  17.36
 2.04 Intr - 103551 103480   72  0  0   82   81    33 0.609   1.60
 2.03 Intr - 107179 107102   78  1  0   96   79    33 0.759   2.95
 2.02 Intr - 112851 112777   75  0  0   59  109    63 0.881   5.21
 2.01 Init - 116628 116581   48  0  0   70   93    -7 0.541  -1.05
 2.00 Prom - 125623 125584   40                              -7.86

 3.00 Prom + 126917 126956   40                              -2.96
 3.01 Init + 131195 131243   49  1  1   77  102    85 0.603   8.02
 3.02 Intr + 131295 131535  241  1  1  100   29   202 0.988  12.11
 3.03 Term + 132268 132457  190  1  1    7   54   182 0.956   3.62
 3.04 PlyA + 132866 132871    6                               1.05

 4.00 Prom + 147202 147241   40                              -5.86
 4.01 Init + 158687 158731   45  1  0   74  100    39 0.898   4.40
 4.02 Intr + 167858 167934   77  1  2   64  101    56 0.952   2.81
 4.03 Intr + 170695 170747   53  1  2   95  103    37 0.981   4.45
 4.04 Intr + 175096 175217  122  2  2   48   98   111 0.966   8.31
 4.05 Intr + 177090 177226  137  2  2   83   94   -17 0.600  -2.23
 4.06 Intr + 180405 180469   65  0  2   92   78    41 0.651   1.86
 4.07 Intr + 183068 183202  135  0  0   62   97    63 0.970   5.14
 4.08 Intr + 183870 184015  146  1  2   60   99   123 0.999  10.60
 4.09 Intr + 185522 185648  127  1  1   84   64   139 0.995  11.35
 4.10 Intr + 188419 188582  164  2  2   94   93    13 0.973   2.09
 4.11 Intr + 190124 190258  135  1  0   39   78   102 0.965   5.06
 4.12 Intr + 190590 190651   62  2  2   74  113    47 0.905   3.33
 4.13 Intr + 192979 193112  134  1  2   40   96   133 0.907   9.59
 4.14 Intr + 195666 195802  137  1  2   45   34   205 0.909  11.09
 4.15 Term + 196131 196181   51  2  0   67   42    57 0.429  -3.57
 4.16 PlyA + 196383 196388    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:202107256_202314436|GENSCAN_predicted_peptide_1|838_aa
AFSPFVFKDDDAPPHDVAPPLDLLPPIKGKKSPESQKGVDSPRTSDHNSPPSLPNMRVPR
RALPAAQEDSSDPTLGHFLLGPDGEKVCLSLPGHTQTEALPSGKGKISYCFSAYESVNSN
ISHEEEGPSSQHFLKGVKLQTFMVSVTGLKGSTSGVVRSFRWVRGLTGLKSEAADLRANT
EPRANLHMNLYETSPLTQTTEKQGAQQSLEAAAQKTGEPQSCINKALICSNRKEFYTRKL
HIDMTPFLKESGNALDYQEEAGRPLRETHHNDQGAPQQARWEQLLSGPAAFMASIAPLRV
PAASERLLPSASLLREVVPALQKELLADGGARYGFSLTTFSPSDKLVRIEYALAAVAGGA
LSVGIKAANGVVLATEKKQKFILYDERSVDKVEPITKHIDPEPRSMTLDSPRASRTEHIQ
TPEADIVQKVGRDYDVHHLHRGLLGYGPESPERLSAVYTSLLPREREGKAEPRLFSQETS
ANISHERDLINEAKRKEKPKKDKTKGPKSEREGKVYGQAEAAIGKSKDSKAKKKLEKKTR
PQRKRTQKERNLEIAAELSGPDVSYEETEDTSNRGSFASDSFVEDPWLSPKYDAQESQVS
LDGRSSPSQIATVTGNMESKEERRCEDPSKALLTKREQEKASWDRLRAERAEMRWLEVEK
KRREQEEQRQLQQEQLERAKKMEEELELEQQRRTEEIRLRKQRLQEEQQRQEEEERKQQL
RLKAAQERARQQQEEFRRKLRELQRKKQQEEAERAEAEKQRQEELEMQLEEEQKHLMEMA
EEERLEYQRRKQEAEEKARLEAEERRQKEEEAARLALEEATKQAQEQARYWIFGQQLP

>gi568815596r:202107256_202314436|GENSCAN_predicted_CDS_1|2517_bp
gctttttccccttttgtttttaaagatgatgatgccccacctcacgatgtggccccacca
ttggatcttctacccccgattaaaggaaaaaaaagtcctgagagccagaagggcgtggac
agccctaggacatcagaccacaacagccccccaagtctcccgaacatgagagtgcccagg
agggcactgccagcagctcaagaagattccagcgaccctacactgggacacttcttgctg
ggtccagatggagaaaaagtctgcctgtccctcccagggcatacccaaaccgaggcgctt
ccatcgggtaaaggtaaaatatcttactgtttttcagcctatgaatctgtcaattcaaat
atcagccatgaagaggaagggcctagtagtcagcatttcctaaaaggagtgaagctgcag
accttcatggtgagtgttacaggtcttaaaggcagcacgtctggagttgttcgttctttc
cggtgggttcgtggtcttactggcctcaagagtgaagctgcagaccttcgcgcaaacact
gaacctagagccaatcttcacatgaacctttatgaaacctcaccgttgacccaaacaaca
gagaagcagggagcccagcagtccttggaggcagcagctcagaagacaggagagcctcaa
agttgtataaataaagcgctgatatgttcaaacagaaaagaattttacacgcgcaagctg
cacatcgacatgacgccgttcctgaaggaaagtggaaatgcactggactatcaggaagaa
gcagggagacccctcagagaaactcaccacaacgaccaaggggccccgcagcaggcgcgc
tgggagcagcttctctcggggcctgccgcgtttatggcttcaatagcgccgctccgggtc
cccgcggcgtcggagaggcttctgcctagcgcctctctgctgcgcgaggtcgtcccggcc
ttacaaaaggagctcctcgctgatggcggagcgcggtacggcttttcgctgactacattc
agcccgtctgataaacttgtccggattgaatatgctttggctgctgtagctggaggagcc
ctgtcagtgggaattaaagcggcaaatggtgtggtattagcaaccgagaaaaaacagaaa
ttcattctgtatgatgagcgaagtgtagacaaagtggaaccaattaccaagcacatagac
ccagagccaaggagtatgacccttgactctcccagggcttcccggactgagcacatccag
accccagaagcagatattgtgcaaaaagtgggcagagattatgatgtacaccacctacac
agaggacttctgggatacgggcctgagtcacccgagaggttgagtgctgtgtatacatct
cttcttccaagagaaagagaagggaaggctgaaccaagactgtttagccaggagacatca
gccaacatcagtcatgagagggatttgattaacgaggccaagagaaaggaaaaacccaag
aaagacaaaaccaaaggacccaaaagcgagagagaaggaaaggtctacgggcaagcagag
gctgccattggaaagtcaaaggactcaaaggctaaaaaaaaattagaaaaaaaaacaaga
ccccaaaggaaaaggacacagaaggaaagaaatctggagatagcggcagagctgagcggg
cctgatgtcagctatgaggaaacagaagacacctcaaatagaggttcctttgcctcagac
tcctttgtagaggacccttggctttctcccaaatatgatgcccaggaaagccaagtttct
ctagatggaagatcatcaccctctcagattgcaactgtcactggcaacatggaatctaaa
gaagagagaagatgtgaggacccttccaaggccctcctcactaagagggagcaggagaag
gcttcctgggacaggcttcgagcagaaagagccgagatgaggtggctggaggtggagaag
aagagaagggagcaggaagagcaaaggcagctccagcaggagcagctggagagagcaaaa
aagatggaggaggagctggagctggagcagcagagacgtacagaagagatccgcttgagg
aaacagagactccaagaagaacagcagcggcaggaggaggaggagagaaagcagcagctc
cggttgaaagcagcccaggagagagcccggcaacagcaagaggagtttcggaggaaactg
cgagaactacagagaaaaaagcagcaggaggaagccgagagggccgaggcagagaagcaa
aggcaagaggaattggaaatgcagttagaagaagaacaaaaacacctgatggaaatggct
gaagaggaacgactggagtaccagcggcggaaacaggaagcagaagagaaggctcggctg
gaggcagaggagaggaggcaaaaagaagaggaagcagcaagactggctctggaagaagcc
acgaaacaagcccaggaacaagccaggtactggatatttgggcaacagttgccatag

>gi568815596r:202107256_202314436|GENSCAN_predicted_peptide_2|228_aa
MRREPNLGSQRWRVFKEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLK
ESYCQRQGVPMNSLRFLFEGQRIADNHTPKEALPYTDAPTAYSELYHPSFVHPRGCHSPH
HVGRFPGASLYLPMAQSVAVGSLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
TAGNILPPPPGCPPSAAQLAVMQAANVLVTQWKGNFFMGESDGGYTIW

>gi568815596r:202107256_202314436|GENSCAN_predicted_CDS_2|687_bp
atgaggagagaacctaatcttggcagccaaaggtggagagttttcaaggaggcaaaacct
tcaactgaggacttgggggataagaaggaaggtgaatatattaaactcaaagtcattgga
caggatagcagtgagattcacttcaaagtgaaaatgacaacacatctcaagaaactcaaa
gaatcatactgtcaaagacagggtgttccaatgaattcactcaggtttctctttgagggt
cagagaattgctgataatcatactccaaaagaagctctaccctatactgatgctccgact
gcctactcagagctctatcatccaagctttgtgcaccccaggggctgccacagtccccac
catgtcggccgctttcctggagcctctctgtatcttcccatggcccagtctgtggctgtt
gggtctttaggttccacaatccccatggcttattatccagttggtcccatctatccacct
ggctccacagtgctggtggaaggcgggtatgatgcaggtgccagatttggagctggggct
actgctggcaacattcttcctccacctcctggatgccctcccagtgctgctcagcttgca
gtcatgcaggcagccaatgtcctcgtaactcagtggaaggggaacttcttcatgggtgaa
tcagatggtggctacaccatctggtga

>gi568815596r:202107256_202314436|GENSCAN_predicted_peptide_3|159_aa
MMTVASPGGLRTAAASAQHRGCSNFRYASRHFRFAQGGGRERREERQGGKWVGEQPRGGA
GCGAALPVVARVNGSFVSSFKDQVLRISTRAIPQEQRAAAALCALLALPTNIMLQFLLGF
TLGNVVGMYLAQNYDIPNLAKKLEEIKKDLDAKKKPPTS

>gi568815596r:202107256_202314436|GENSCAN_predicted_CDS_3|480_bp
atgatgacggtggcttcacccgggggtctccgcacagcagcggcctcggcacaacaccgc
ggctgcagtaacttccgctacgcctcgcgtcacttccgcttcgcgcagggaggagggaga
gagagaagagaggaaagacaaggcgggaaatgggtgggggagcagccaaggggaggggca
ggctgtggagctgctttgccggtggtcgcgcgggtgaacggcagttttgtcagctccttc
aaggaccaggtcctgcgcatcagtactagggccatcccccaggagcaaagagctgcagca
gccctttgcgccctcctcgccctccccaccaacatcatgctccaattcctgcttggattt
acattgggcaacgtggttggaatgtatctggctcagaactatgacataccaaacctggct
aaaaaacttgaagaaattaaaaaggacttggatgccaagaagaaaccccctacttcatga

>gi568815596r:202107256_202314436|GENSCAN_predicted_peptide_4|529_aa
MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTAEALAAF
TALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMRGIR
SQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYI
MRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASAKLSELLPEEVEAEVKAAAEI
SMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIA
HAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISR
MLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDRGIRKISGTGKALAKTEKYE
HKSEVKTYDPSGDSTLPTCSKKRKIEQVDKEDEITEKKAKKAKIKVKVEEEEEEKVAEEE
ETSVKKKKKRGKKKHIKEEPLSEEEPCTSTAIASPEKKKKKKKKRENED

>gi568815596r:202107256_202314436|GENSCAN_predicted_CDS_4|1590_bp
atgttggtgctgtttgaaacgtctgtgggttacgccatctttaaggttctaaatgagaag
aaacttcaagaggttgatagtttatggaaagaatttgaaactccagagaaagcaaacaaa
atagtaaagctaaaacattttgagaaatttcaggatacagcagaagcattagcagcattc
acagctctgatggagggcaaaatcaataagcagctgaaaaaagttctgaagaaaatagta
aaagaagcccatgaaccgctggcagtagctgatgctaaactaggaggggtcataaaggaa
aagctgaatctcagttgtatccatagtcctgttgttaatgaacttatgagaggaattcgt
tcacaaatggatggattaatccctggggtagaaccacgtgaaatggcagctatgtgtctt
ggattggctcacagcctgtctcgatatagattgaagtttagcgctgataaagtagacaca
atgattgttcaggcaatttccttgttagatgacttggataaagaactaaacaactacatt
atgcgatgtagagaatggtatggctggcatttccctgaattaggaaaaattatttcagat
aatttaacatactgcaagtgtttacagaaagttggcgataggaagaactatgcctctgcc
aagctttctgagttgctgccagaagaagttgaagcagaagtgaaagcagctgcagagata
tcaatgggaacagaggtttcagaagaagatatttgcaatattctgcatctttgcacccag
gtgattgaaatctctgaatatcgaacccagctctatgaatatctacaaaatcgaatgatg
gccattgcacccaatgttacagtcatggttggggaattagttggagcacggcttattgct
catgcaggttctcttttaaatttggccaagcatgcagcttctaccgttcagattcttgga
gctgaaaaggcacttttcagagccctcaaatctagacgggatacccctaagtatggtctc
atttatcatgcttcactcgtgggccagacaagtcccaaacacaaaggaaagatttctcga
atgctggcagccaaaaccgttttggctatccgttatgatgcttttggtgaggattcaagt
tctgcaatgggagttgagaacagagccaaattagaggccaggttgagaactttggaagac
agagggataagaaaaataagtggaacaggaaaagcattagcaaaaacagaaaaatatgaa
cacaaaagtgaagtgaagacttacgatccttctggtgactccacacttccaacctgttct
aaaaaacgcaaaatagaacaggtagataaagaggatgaaattactgaaaagaaagccaaa
aaagccaagattaaagttaaagttgaagaagaggaagaagaaaaagtggcagaagaagaa
gaaacatctgtgaagaagaagaagaaaaggggtaaaaagaaacacattaaggaagaacca
ctttctgaggaagaaccatgtaccagcacagcaattgctagtccagagaaaaagaagaaa
aagaaaaaaaagagagagaacgaggattaa