GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:42:15

Sequence gi568815592f:34657841_34873567 : 215727 bp : 43.55% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -  25452  25389   64  2  1  103   75    43 0.186   3.22
 1.01 Init -  38763  38606  158  0  2  110   93   351 0.924  37.18
 1.00 Prom -  55933  55894   40                              -5.86

 2.00 Prom +  60578  60617   40                              -2.86
 2.01 Init +  60954  60956    3  2  0  108   81     0 0.485   1.30
 2.02 Intr +  86495  86666  172  1  1    1   84   133 0.079   3.72
 2.03 Intr +  99540  99711  172  1  1   72   89    96 0.357   7.10
 2.04 Intr + 100072 100114   43  1  1  120   84    53 0.954   6.34
 2.05 Intr + 104755 104863  109  0  1   94   55    39 0.610   1.06
 2.06 Intr + 110128 110157   30  2  0  125   88     1 0.320   1.90
 2.07 Intr + 112432 112555  124  2  1   51  119    91 0.419   8.14
 2.08 Term + 115606 115804  199  1  1  130   43    80 0.986   4.57
 2.09 PlyA + 115926 115931    6                               1.05

 3.00 Prom + 126890 126929   40                              -5.06
 3.01 Init + 134285 134328   44  1  2  110   78   107 0.517   9.85
 3.02 Intr + 157179 157310  132  0  0   94   32    98 0.835   4.56
 3.03 Intr + 163813 163975  163  1  1   93   80   184 0.876  18.08
 3.04 Intr + 165417 165508   92  2  2   79   88    72 0.995   5.09
 3.05 Intr + 176377 176566  190  1  1   77   46   272 0.999  21.49
 3.06 Intr + 176881 177021  141  0  0  109   89    35 0.982   6.25
 3.07 Intr + 177454 177624  171  0  0   91   66   192 0.982  17.44
 3.08 Intr + 178316 178508  193  1  1   76   80   243 0.983  21.37
 3.09 Intr + 182037 182228  192  1  0   77   49   100 0.760   4.46
 3.10 Intr + 193290 193363   74  1  2   89   75    19 0.544  -0.17
 3.11 Intr + 194345 194375   31  1  1   68  110    29 0.395   0.80
 3.12 Intr + 197777 197863   87  0  0  115   66    88 0.943   9.24
 3.13 Intr + 198399 198569  171  1  0  104   94    76 0.989   9.71
 3.14 Intr + 198950 199089  140  0  2   73   94    72 0.977   6.48
 3.15 Intr + 199570 199630   61  0  1   57  115    63 0.500   4.21
 3.16 Intr + 199884 200077  194  1  2  101  100   159 0.998  17.61
 3.17 Intr + 200572 201731 1160  0  2   99  108   697 0.637  60.49
 3.18 Intr + 206162 206358  197  2  2   71   84   192 0.900  16.16
 3.19 Intr + 209385 209539  155  1  2  103   65    56 0.966   4.59
 3.20 Intr + 209626 209776  151  0  1   40  110   186 0.963  15.74
 3.21 Intr + 213014 213276  263  0  2   69   70   173 0.965  10.81
 3.22 Intr + 213744 213852  109  2  1  110  101    93 0.948  12.66
 3.23 Intr + 213979 214085  107  2  2   69   94    76 0.997   6.23
 3.24 Term + 214473 214598  126  2  0  110   47   125 0.999   8.88
 3.25 PlyA + 215353 215358    6                              -0.45


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:34657841_34873567|GENSCAN_predicted_peptide_1|74_aa
MEGMDVDLDPELMQKFSCLGTTDKDVLISEFQRLLGFQLNPAGCAFFLDMTNWVVDNKAL
IPPLFEWELNLVVK

>gi568815592f:34657841_34873567|GENSCAN_predicted_CDS_1|222_bp
atggagggcatggacgtagacctggacccggagctgatgcagaagttcagctgcctgggc
accaccgacaaggacgtgctcatctccgagttccagaggctgctcggcttccagctcaat
cctgccggttgcgccttcttcctggacatgaccaactgggtagtagataacaaggccctt
atacctccattgtttgagtgggaactgaatttagttgtcaag

>gi568815592f:34657841_34873567|GENSCAN_predicted_peptide_2|283_aa
MSRGYVKEQFAWRHFYWYLTNEGIQYLHDYLHLPPEIVPATLRRRHPETGRPRPKGLEDE
RKKRKSPAPRSAAGGEGFGSLHASLVGFRGVVAGCARHFRASRNGVANGLQSNMPKFYCD
YCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTRAMIPPPPSLRSIL
YFSGSSSPWYDASTPYGGPSHDANDGPSSSWDDASGTCSWNEAAHGRPYANDAWAPNDET
SCPSHDGAHSARNDSTRQIRIEGRPYCIGFILPVLLHQEIMLL

>gi568815592f:34657841_34873567|GENSCAN_predicted_CDS_2|852_bp
atgtcccgaggctacgtgaaggaacagtttgcctggagacatttctactggtaccttacc
aatgagggtatccagtatctccatgattaccttcatctgcccccggagattgtgcctgcc
accctacgccgtaggcatccagagactggcaggcctcggcctaaaggtctggaggatgaa
aggaagaaaaggaaaagccccgcccctcgctcggctgctggaggcgagggcttcggaagt
cttcatgctagtctcgtggggttccgcggtgtcgtcgctggctgtgcgcgtcatttccgg
gcgtcacgtaacggagtggccaacggcctgcagagcaacatgcccaagttttattgtgac
tactgcgatacatacctcacccatgactctccatctgtgagaaagacacactgcagtgga
aggaaacacaaagagaatgtgaaagactattatcagaaatggatggaagagcaggctcag
agcctgattgacaaaacaagggcgatgataccacctccccccagccttcgctccattctt
tatttcagcgggtcctcctcgccctggtatgatgccagcaccccatatggggggccctcc
catgatgccaatgatgggccctcctcctcctgggatgatgccagtgggacctgctcctgg
aatgaggccgcccatgggaggccatatgccaatgatgcctgggcccccaatgatgagacc
tcctgcccgtcccatgatggtgcccactcggcccggaatgactcgaccagacagataagg
atagaggggaggccttattgtatcggttttatattacctgttctgcttcaccaggagatc
atgctgctgtga

>gi568815592f:34657841_34873567|GENSCAN_predicted_peptide_3|1447_aa
MAAAAAVSGAHAAARANCFISEPHALPLSNGDNNAYLMWDIAKINSDVMKTLRSVPGAKF
TKNLSPDKINLSTLKGEGQLTNLELDEEVLQNVLELPTWLAITRVYCNRASIRCLDKVEV
EMKTCEDPRPPNGQSPIALASGQSEYGFAEKVVEGMFIIVNSITIKIHSKAFHASFELWQ
LQGYSVNPNWQQSDLRLTRITDPCRGEVLTFKEITWQTLRIEADATDNGDQDPVTTPLRL
ITNQGRIQIALKRRTKDCNVISSKLMFLLDDLLWVLTDSQLKAMMKYAESLSEAMEKSAH
QRKSLAPEPVQITPPAPSAQQSWAQAFGGSQGNSNSSSSRLSQYFEKFDVKESSYHLLIS
RLDLHICDDSQSREPGVNSFTLSGRQRLYKSCAMPCCAVPSKLSPKSIASAGQLHLLQTI
VVQGQGMTFLCYGYMAVITGLVTGALFSSFGEVMFSWMVLVLVEQEESLLVVTTGVSANR
LMGGAMQLTFRKMAFDYYPFHWAGDSCKHWVRHCEAMETRGQWAQKLVMEFQSKMEKWHE
ETGLKPPWHLGVDSLFRRKADSLSSPRKNPLERSPSQGRQPAFQPPAWNRLRSSCMVVRV
DDLDIHQVSAIHIEFTEYYFPDNQELPVPCPNLYIQLNGLTFTMDPVSLLWGNLFCLDLY
RSLEQFKAIYKLEDSSQKDEHLDIRLDAFWLKRPKASWDLWSVHFTQISLDFEGTENFKG
HTLNFVAPFPLSIWACLPLRWQQAQARKLLLASEGRLKPSASFGSPVQSEALAPDSMSHP
RSKTEHDLKSLSGLTEVMEILKEGSSGMDNKGPLTELEDVADVHMLVHSPAHVRVRLDHY
QYLALLRLKEVLQRLQEQLTKDTESMTGSPLQNQTACIGVLFPSAEVALLMHPAPGAVDA
DSAGSDSTSLVDSELSPSEDRELKSDASSDQGPASPEKVLEESSIENQDVSQERPHSNGE
LQDSGPLAQQLAGKGHEAVESLQAKKLSRTQASSSPAALKPPAGRETAVNGQGELIPLKN
IEGELSSAIHMTKDATKEALHATMDLTKEAVSLTKDAFSLGRDRMTSTMHKMLSLPPAKE
PMAKTDEGVAAPVSGGAARLRFFSMKRTVSQQSFDGVSLDSSGPEDRISVDSDGSDSFVM
LLESESGPESVPPGSLSNVSDNAGVQGSPLVNNYGQGSPAANSSVSPSGEDLIFHPVSVL
VLKVNEVSFGIEVRGEDLTVALQAEELTLQQLGTVGLWQFLHGQCPGTCFQESSTLKTGH
IRPAVGLRFEVGPGAAVHSPLASQNGFLHLLLHGCDLELLTSVLSGLGPFLEDEEIPVVV
PMQIELLNSSITLKDDIPPIYPTSPGPIPITLAMEHVVLKRSDDGVFHIGAAAQDKPSAE
VLKSEKRQPPKEQVFLVPTGEVFEQQVKELPILQKELIETKQALANANQDKEKLLQEIRK
YNPFFEL

>gi568815592f:34657841_34873567|GENSCAN_predicted_CDS_3|4344_bp
atggcggcggcggcggctgtgtccggtgctcacgccgcggcgagggcaaactgcttcata
tccgaacctcatgctcttcctctgagcaatggggataataatgcatacctcatgtgggat
attgcaaagattaattcagatgttatgaagacccttcgttcagtgcctggtgcaaagttc
actaagaatctttccccagacaaaatcaacctgagcaccctgaaaggggagggtcagctg
accaacctggagctggatgaagaggttctacagaatgtactggagctgcccacctggtta
gccatcactcgggtctactgcaacagggcctccatccggtgtctggataaggtagaggtg
gagatgaagacatgtgaggatcctcggccccccaatggacagtctcccattgcccttgct
tcaggacagagtgaatatggctttgccgaaaaggtggtggaagggatgttcatcattgtc
aattctatcaccatcaagattcactccaaggccttccacgcttcttttgaattgtggcag
ctccagggctatagtgtcaaccccaactggcagcagagtgaccttcgccttacccgcatc
actgacccctgccgaggagaggttttaacatttaaggaaataacttggcaaacactccga
attgaggcagatgctacagacaatggtgatcaggacccagtcaccactccattgaggctt
attacgaaccaaggcaggatccaaatagccctcaaaagaagaaccaaagattgcaatgtg
atatcctccaagctgatgttcctgttggatgacctgctctgggtgctgactgactcacag
ctcaaggctatgatgaagtatgcagagtcactgagtgaagccatggagaagtcagcccat
caaagaaagagcctggcccctgaacctgtgcagatcactccaccagcccccagtgcccag
cagtcctgggcccaggcatttggtggcagccagggcaacagcaacagcagcagcagccgc
ctcagccagtactttgagaaatttgatgtgaaagagtcctcctaccatctgctcatctcc
cgcctggacctgcacatttgtgatgatagccagtcccgagagccaggggtcaatagcttc
actctgtctgggcgccagcgcctgtacaagagctgtgccatgccgtgctgtgccgtgccg
tccaagctgagccccaagagcatagcatcagcagggcagttacaccttttacagacaata
gtggtacagggccaagggatgaccttcctatgttatggctacatggctgtgataacaggt
ttggtcactggggccttatttagttcatttggtgaggtcatgttttcctggatggtcttg
gtgctggtggagcaggaggagtctctccttgtggtcaccacaggtgtctctgccaacaga
ctcatgggtggtgccatgcagcttaccttccgcaagatggcgtttgactattaccctttc
cattgggcaggtgatagctgcaaacattgggtacgccactgtgaggccatggagacccga
ggccagtgggcccagaagctggtgatggaatttcagagcaaaatggagaagtggcatgaa
gagacgggtctgaaaccaccctggcaccttggagtagactctctctttcggagaaaagca
gattctctttccagtcctcgaaagaaccctcttgagagaagcccctctcagggcagacag
cctgcctttcagcctccagcatggaaccgcttacgctctagctgcatggtggtacgggtg
gatgacctggacatccaccaggtctctgccattcatattgagttcacagagtattacttc
ccagataatcaggagcttccagttccttgtcctaatctctacattcagttaaatggtctg
acatttactatggatcctgtcagtttgctctggggaaacctcttttgcctggatttatac
cgcagcttggagcagttcaaagctatctacaagctggaagattcaagtcagaaagatgaa
cacttggacatccgactagatgcattctggttgaagagacctaaggcttcctgggatctc
tggtctgtccactttacccagatctccttggactttgagggaacagaaaacttcaaaggc
cataccttgaattttgtagcccccttccccctgtccatttgggcctgcctacccctccgc
tggcagcaagcccaggcacggaagcttcttttggcctcagaggggaggctgaaaccatca
gccagttttggaagtcctgtccagtctgaggctcttgcccctgactctatgtcccatccg
cggtcaaagactgaacatgacttgaaaagcttatcaggacttacagaagtcatggaaatt
ctgaaagaaggcagtagtggtatggacaacaaagggcctctgacagagctggaggatgta
gcagatgttcatatgcttgtacattccccggcccatgtccgcgtgaggcttgaccactac
cagtacttggctctgcttcgcctgaaggaggtgctgcagaggcttcaggagcagctgact
aaggatacagagtcaatgactgggtctcccctgcagaatcagacagcttgcattggagtt
ctctttcccagtgctgaagtggctctgcttatgcatcctgcacccggtgctgtcgatgct
gactctgcaggctcagatagcactagcctcgtagattcagagctatctccttcagaggat
cgggaactgaagtctgatgcctcatcagaccagggcccagcaagccctgagaaggtcttg
gaggaaagtagcattgaaaatcaggatgtatcccaggagaggccacatagcaatggagaa
ctgcaggactcaggtccacttgcccagcagctggcagggaagggccatgaggcagtagag
tccctacaggccaagaaactgagcagaacccaagcctccagctcaccagctgcattgaag
cccccagctggcagggagactgctgtgaatggacagggtgagctcatccccttgaagaac
attgagggagaattgtcaagtgctattcacatgaccaaggatgccaccaaggaggctcta
catgccaccatggacctcaccaaggaagctgtgtccctgactaaggatgccttcagtttg
ggcagagatcgaatgacctccaccatgcacaagatgttgtccctgcccccagccaaggag
cccatggccaagacagatgagggggtggcagccccagtgagtggaggtgctgcacgactc
cgatttttctccatgaagaggacggtatctcaacagtcatttgatggtgtctcattggat
agcagtggccctgaagaccggatttcagtggacagtgatggcagtgatagctttgtgatg
ctcttggagtctgagtctggtccagaatctgttccaccaggatctctttcaaatgtctca
gataatgctggtgttcaagggagccctcttgtgaataattatggccaggggtcaccagca
gccaacagttcagtttcacccagtggagaagacctcatctttcacccggtctcagttctg
gtcctgaaggtgaatgaggtgtcttttgggattgaggtacgtggtgaggacctgactgtg
gccctgcaagcagaggaactgaccctccagcagctgggcaccgtgggactctggcagttc
ctgcatggacagtgcccaggtacatgctttcaggaatcctcaactttgaagactggccac
atcaggccagctgtgggccttcgctttgaggtggggcctggagcagctgttcattccccc
ctggcctcacaaaatggcttcctacatttattgcttcatggctgtgacctcgagctgctc
acttcagtgctcagtggcctggggcccttcttggaggatgaggagatcccggtggtagtc
cccatgcagattgagcttctgaactccagcatcaccctaaaggatgatatcccccccatc
tatccaacatctccaggccccatccccatcactctggccatggaacatgttgtgctgaag
aggagtgatgatggtgtgttccacataggcgctgctgctcaggacaaaccatcagctgaa
gtacttaaaagtgagaagagacagcccccaaaagaacaggtgtttttggtgcccacagga
gaggtttttgaacagcaggtgaaagaactgcctatcctacaaaaagaacttatagaaact
aaacaagccttggccaatgccaaccaggataaagaaaaacttcttcaggagattaggaaa
tataaccccttctttgagctctga