GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:57:03

Sequence gi568815593r:170278707_170485447 : 206741 bp : 46.08% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    943    938    6                               1.05
 1.04 Term -  11350  11160  191  2  2   89   49   110 0.444   4.81
 1.03 Intr -  13626  13557   70  0  1   97   66    16 0.566  -0.95
 1.02 Intr -  14666  14604   63  2  0  129   99   124 0.999  16.51
 1.01 Init -  18905  18828   78  2  0  103  121    66 0.991  12.54
 1.00 Prom -  20002  19963   40                              -9.36

 2.02 PlyA -  20448  20443    6                               1.05
 2.01 Sngl -  22487  22236  252  2  0   91   47   191 0.792  10.40
 2.00 Prom -  44164  44125   40                              -2.86

 3.00 Prom +  46354  46393   40                              -7.06
 3.01 Init +  46424  46487   64  1  1   64   70    29 0.363   0.01
 3.02 Intr +  49005  49169  165  1  0   95   61    79 0.567   5.83
 3.03 Intr +  62406  62646  241  1  1   94   64    69 0.530   1.71
 3.04 Intr +  63017  63089   73  2  1   40  113    71 0.218   4.21
 3.05 Term +  74497  74664  168  0  0   85   41   143 0.143   7.18
 3.06 PlyA +  82137  82142    6                               1.05

 4.00 Prom +  83466  83505   40                              -7.56
 4.01 Sngl +  84783  84953  171  2  0  106   41   155 0.478   7.43
 4.02 PlyA +  85738  85743    6                               1.05

 5.05 PlyA -  87136  87131    6                               1.05
 5.04 Term - 100267  99998  270  1  0  103   43   423 0.993  34.78
 5.03 Intr - 104196 104023  174  0  0   67   77    54 0.782   2.34
 5.02 Intr - 105144 104973  172  2  1   72   84   273 0.769  25.25
 5.01 Init - 106723 106608  116  1  2   71   79   256 0.684  20.68
 5.00 Prom - 119109 119070   40                              -4.16

 6.06 PlyA - 119558 119553    6                               1.05
 6.05 Term - 123855 123764   92  1  2   95   44    40 0.333  -1.82
 6.04 Intr - 125261 125193   69  0  0  137   72     0 0.481   2.45
 6.03 Intr - 131773 131537  237  2  0   67   55   104 0.682   2.59
 6.02 Intr - 132709 132669   41  0  2  102  102    54 0.875   6.07
 6.01 Init - 140081 140023   59  2  2   77   28    13 0.020  -5.01
 6.00 Prom - 142757 142718   40                              -0.26

 7.04 PlyA - 145016 145011    6                               1.05
 7.03 Term - 145497 145348  150  0  0   95   39    89 0.122   2.61
 7.02 Intr - 150124 150059   66  1  0   78   98    53 0.110   4.40
 7.01 Init - 162277 162065  213  1  0   77   92    62 0.141   4.24
 7.00 Prom - 176017 175978   40                              -5.86

 8.00 Prom + 177281 177320   40                              -2.46
 8.01 Init + 179119 179171   53  0  2   78   96    43 0.017   4.73
 8.02 Intr + 188373 188496  124  0  1   61   59    48 0.117  -0.21
 8.03 Intr + 190879 190989  111  0  0  111   68     6 0.127   1.48
 8.04 Intr + 193744 193777   34  0  1  115   80    44 0.357   4.10
 8.05 Intr + 204349 204489  141  2  0   59   61    80 0.006   2.72

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  75171  75258   88  2  1  108   86   104 0.944  13.00


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:170278707_170485447|GENSCAN_predicted_peptide_1|133_aa
MALRNVPFRSEVLGWDPDSLADYFKKLNYKDCEKAVKKYHIDGARFLAALKSCAETNLCS
YWSEFCFQVPFLVPVLNVFLFPDTLLLCVSSQAHVHLLLHNLPEIPSAYALVSAEQKLVA
SCSVLSRHPSGSP

>gi568815593r:170278707_170485447|GENSCAN_predicted_CDS_1|402_bp
atggcactgaggaatgtgccctttcgctcagaggtcctgggctgggaccccgacagcctt
gctgactatttcaagaagctcaactataaggactgtgagaaggcagtgaagaagtaccac
atcgatggggctcgcttcttggcagctctcaagtcttgtgctgaaactaacctgtgctcc
tattggtctgagttttgcttccaggtgccatttcttgtccccgttctgaatgtcttcctc
tttcctgacaccctgctcctctgtgtctccagccaggctcatgtccacctcctcctccac
aatcttcctgaaattccctcagcttacgccctcgtctcagcagagcagaagctggtggcc
agctgctcagtgctcagccgccacccctctggcagcccttag

>gi568815593r:170278707_170485447|GENSCAN_predicted_peptide_2|83_aa
MGEGIPTTASNHYALLDPHPLLCFMLEANRQMLYTQLLPLASMVMAATLSGAVPRGCFHG
RPILEVRGLRLSLHRVTVVLLVS

>gi568815593r:170278707_170485447|GENSCAN_predicted_CDS_2|252_bp
atgggcgagggtatccccaccactgcttcaaatcactatgccctactggatccccaccct
ctgctctgcttcatgcttgaagccaacagacagatgctgtacacccagctgctgcccctg
gcctccatggtcatggcagccacgctgtcgggggctgtacccagaggctgctttcatggc
cgccccattttggaggtgaggggcctgcggctgagcctgcacagggtcacagtggtcctt
ctggtctcctga

>gi568815593r:170278707_170485447|GENSCAN_predicted_peptide_3|236_aa
MGCSNQHTTNSCGEGNMMEEEAKVLQKTIYTCRLHGTFIPQYPTLHREPSDKVTEMSPKP
MPAASCGHLLARLLAAGKLCSPRTSNSQTHFQGQRYEDLGSRAVGKNARLLVILGYNPLE
GIVTGLCSFMPLVGFMIIFMTIVTIMTATMVQALITCLLLLRYKPAQHGTVLNTADGCNT
TASSPEAQHSAQLLRDANQATLRLPTNFLLSADSCFLLCGEFFQILIKAQRIDLSD

>gi568815593r:170278707_170485447|GENSCAN_predicted_CDS_3|711_bp
atgggttgttctaaccagcacacaaccaattcttgtggagaaggcaatatgatggaggag
gaagccaaggttctgcagaagaccatctacacctgtcgtctgcatgggactttcattcct
cagtacccaactctccaccgagagccctctgacaaggtcactgagatgtccccaaaaccc
atgccagcagcctcttgtggtcaccttcttgctagacttttagcagcagggaagctctgt
agtccaaggacatccaactcccagactcacttccagggacagagatacgaggatcttggg
agtagagctgtgggcaagaatgccagactcctggtgattctgggatataaccccttggag
gggattgtcacgggtctgtgttccttcatgcctctagtaggattcatgatcatctttatg
acaatagtgacaataatgacagctaccatggtccaagcccttattacatgcctgttgctc
ctgcgctacaaacctgcacagcatgggactgtcctgaatactgcagatggctgtaacaca
acggccagctccccggaggctcagcactcagcccagcttctccgagatgcaaaccaggcc
actctgaggctgcctacaaactttctgctgagtgccgacagctgcttcctgctctgcggg
gagttcttccagatcctgatcaaggcacagagaattgatctatcagattaa

>gi568815593r:170278707_170485447|GENSCAN_predicted_peptide_4|56_aa
MANYKPGKETSSDTNPARTLILDFQCPELWDNRFSLFNYPVCDIRLWQPKQTNTAP

>gi568815593r:170278707_170485447|GENSCAN_predicted_CDS_4|171_bp
atggccaactacaagccaggaaaagaaacttcatcagacaccaaccctgcccgaacctta
atcttggactttcagtgtccagaactgtgggacaatagattttcgttatttaactaccca
gtctgcgacattcgattatggcagcccaagcagactaatacagccccatag

>gi568815593r:170278707_170485447|GENSCAN_predicted_peptide_5|243_aa
MAQKRGETRALCLGVTMVVCAVITYYILVTTVLPLYQKSVWTQESKCHLIETNIRDQEEL
KGKKVPQYPCLWVNVSAAGRWAVLYHTEDTRDQNQQPLSTSCVKPVGLKRRELMHEQCLA
GKNWHRGEEQRKLQGLEEGDVFQLTMMGVSERLLCSYIPGSVDNYQTARADVEKVRAKFQ
EQQVFYCFSAPRGNETSVLFQRLYGPQALLFSLFWPTFLLTGGLLIIAMVKSNQYLSILA
AQK

>gi568815593r:170278707_170485447|GENSCAN_predicted_CDS_5|732_bp
atggcccagaagcggggagagacacgagccctttgcctgggtgtaaccatggtggtgtgt
gccgtcatcacctactacatcctggtcacgactgtgctgcccctctaccagaaaagcgtg
tggacccaggaatccaagtgccacctgattgagaccaacatcagggaccaggaggagctg
aagggcaagaaggtgccccagtacccatgcctgtgggtcaacgtgtcagctgccggcagg
tgggctgtgctgtaccacacggaggacactcgggaccagaaccagcagccattgagcacc
tcctgtgtcaagcctgtaggactcaagaggagagagctcatgcatgaacagtgcctagca
gggaagaattggcaccggggagaagaacagaggaagttacaggggttagaggagggggat
gttttccagctgacaatgatgggggtatcagaaaggctcttgtgctcctacatcccaggc
agcgtggacaattaccagacggcccgggccgacgtggagaaggtcagagccaaattccaa
gagcagcaggtcttctactgcttctccgcacctcgggggaacgaaaccagcgtcctattc
cagcgcctctacgggccccaggccctcctcttctccctcttctggcccaccttcctgctg
accggtggcctcctcattatcgccatggtgaagagcaaccagtacctgtccatcctggcg
gcccagaagtag

>gi568815593r:170278707_170485447|GENSCAN_predicted_peptide_6|165_aa
MVIQQRTQCEQRLGGGTGFLTFVCTVDENLVFEGCKNNMQVPLHYVCDPLCGGPGAPMLC
LQYPAWGTQVHLHCVCDLLSGGPGTPSLCLRSPEWGTWYTFTVSAIPCVGDPGSEVGSLG
AVFYYNMQLPSVNPSVYLLDNSRGTSRPQDGAATDGRSLVPPATT

>gi568815593r:170278707_170485447|GENSCAN_predicted_CDS_6|498_bp
atggtgatccagcagagaacccagtgtgaacaaaggctaggaggtgggacgggcttttta
acatttgtctgcacagtggatgagaacttggtctttgaagggtgcaagaacaacatgcag
gtgcccctgcactatgtctgcgatcccctgtgtgggggacccggtgcacccatgctgtgt
ctgcaataccctgcatgggggacccaggtgcacctgcactgtgtctgcgatctcctgagt
gggggacctggtacaccttcactgtgtctgcgatctcctgagtgggggacctggtacacc
ttcactgtgtctgcgatcccctgtgtgggggacccaggctctgaagtgggaagcttagga
gctgttttctactacaatatgcagctcccctctgtgaatccctctgtctacctgctggat
aactccagggggacctcaaggccacaggatggtgcagccacagatggaagaagcctggtt
cccccagcaaccacctag

>gi568815593r:170278707_170485447|GENSCAN_predicted_peptide_7|142_aa
MEGRSSDGNGNQGIGPGGENTCEPAAQPDSWVLHAVQSGSFIQGHTLHFSIALQLTGLYI
VISVNPQLSLEHHPQLGRDIEPGFDQRGIEKGKSPATPHLGKDREPKSMSEKLPSNGNVS
SRRKRASAALTAVMAMNDLCPA

>gi568815593r:170278707_170485447|GENSCAN_predicted_CDS_7|429_bp
atggaagggaggagctcagacggcaatgggaaccagggcattgggccagggggagagaac
acctgtgagccagcagcccagcctgactcctgggtcctccatgctgtccagagcggaagc
ttcatccaaggacataccctccacttttccattgccttacagcttacaggtttgtacatc
gtgatctcagttaacccccaactctccctggagcaccacccgcagctgggcagggacata
gaaccaggctttgatcaaaggggcattgagaagggaaagtctcctgctaccccgcacttg
ggtaaggacagggaacccaagagcatgtctgagaagctccctagtaatggaaatgtcagc
agcagaagaaaaagagccagtgctgctttgacggcagtgatggcgatgaatgatttatgt
ccagcctaa

>gi568815593r:170278707_170485447|GENSCAN_predicted_peptide_8|155_aa
MDANQEEIPVSPEKEFRRERSFGGVDKHSQMECAGGWQRWGNEDTQCRQLLKAAGRESEL
LTVPRLCFLRAPMPSTLPNPLEASQFSYLLLSGFQHVIGVQVVFGYMRQMESKVELGPAE
PDSLGSTCVHLQAVETGISMELTRPASHPGLKIIX

>gi568815593r:170278707_170485447|GENSCAN_predicted_CDS_8|465_bp
atggatgcaaaccaagaagaaatccctgtttcacctgaaaaagaattcagaagggagaga
agttttggcggagttgacaagcacagtcagatggaatgtgctggcggatggcaaagatgg
ggaaatgaagatacccagtgtagacagcttctgaaagcagctggccgtgagtcagagcta
ctgactgtaccaagactgtgctttctgagggcaccaatgccctccaccttaccaaacccg
ctagaggcttctcagttctcatatctcttactctccggctttcaacacgttattggtgta
caggtggtgtttggttacatgagacagatggagtcaaaagtggaactggggcccgcagag
ccggatagcttgggcagtacgtgtgtgcacctgcaggctgtggagacaggtatttccatg
gagctcactcgccctgcctctcatccaggcctgaaaatcatagnn