Result of FASTA (ccds) for pF1KB6802
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6802, 184 aa
  1>>>pF1KB6802 184 - 184 aa - 184 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.8810+/-0.000804; mu= 9.3776+/- 0.048
 mean_var=68.5555+/-13.275, 0's: 0 Z-trim(108.0): 56  B-trim: 0 in 0/52
 Lambda= 0.154901
 statistics sampled from 9876 (9933) to 9876 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.707), E-opt: 0.2 (0.305), width:  16
 Scan time:  1.870

The best scores are:                                      opt bits E(32554)
CCDS4468.1 DUSP22 gene_id:56940|Hs108|chr6         ( 184) 1250 288.0 2.2e-78
CCDS69035.1 DUSP22 gene_id:56940|Hs108|chr6        ( 205) 1146 264.8 2.4e-71
CCDS13193.1 DUSP15 gene_id:128853|Hs108|chr20      ( 235)  686 162.0 2.4e-40
CCDS82607.1 DUSP15 gene_id:128853|Hs108|chr20      ( 232)  643 152.4 1.9e-37
CCDS82606.1 DUSP15 gene_id:128853|Hs108|chr20      ( 295)  572 136.5 1.4e-32
CCDS9033.1 DUSP6 gene_id:1848|Hs108|chr12          ( 381)  320 80.2 1.6e-15
CCDS14724.1 DUSP9 gene_id:1852|Hs108|chrX          ( 384)  320 80.2 1.6e-15
CCDS1528.1 DUSP10 gene_id:11221|Hs108|chr1         ( 482)  321 80.5 1.7e-15
CCDS33766.2 DUSP7 gene_id:1849|Hs108|chr3          ( 419)  312 78.5   6e-15
CCDS9711.1 STYX gene_id:6815|Hs108|chr14           ( 223)  307 77.3 7.3e-15
CCDS8157.1 SSH3 gene_id:54961|Hs108|chr11          ( 659)  304 76.7 3.1e-14
CCDS7724.1 DUSP8 gene_id:1850|Hs108|chr11          ( 625)  299 75.6 6.5e-14
CCDS7566.1 DUSP5 gene_id:1847|Hs108|chr10          ( 384)  289 73.3 1.9e-13
CCDS6092.1 DUSP26 gene_id:78986|Hs108|chr8         ( 211)  282 71.7 3.3e-13
CCDS55882.1 SSH1 gene_id:54434|Hs108|chr12         ( 692)  286 72.7 5.3e-13
CCDS53825.1 SSH1 gene_id:54434|Hs108|chr12         ( 703)  286 72.7 5.4e-13
CCDS9121.1 SSH1 gene_id:54434|Hs108|chr12          (1049)  286 72.8 7.7e-13
CCDS8650.1 DUSP16 gene_id:80824|Hs108|chr12        ( 665)  283 72.1 8.1e-13
CCDS13883.1 DUSP18 gene_id:150290|Hs108|chr22      ( 188)  275 70.1 8.9e-13
CCDS2289.1 DUSP19 gene_id:142679|Hs108|chr2        ( 217)  271 69.2 1.9e-12
CCDS6073.1 DUSP4 gene_id:1846|Hs108|chr8           ( 303)  268 68.6 4.1e-12
CCDS1234.1 DUSP12 gene_id:11266|Hs108|chr1         ( 340)  268 68.6 4.5e-12
CCDS6072.1 DUSP4 gene_id:1846|Hs108|chr8           ( 394)  268 68.6 5.2e-12
CCDS2016.1 DUSP2 gene_id:1844|Hs108|chr2           ( 314)  263 67.5 9.1e-12
CCDS33418.1 DUSP28 gene_id:285193|Hs108|chr2       ( 176)  258 66.3 1.2e-11
CCDS11253.1 SSH2 gene_id:85464|Hs108|chr17         (1423)  267 68.6 1.9e-11
CCDS74024.1 SSH2 gene_id:85464|Hs108|chr17         (1450)  267 68.6   2e-11
CCDS4380.1 DUSP1 gene_id:1843|Hs108|chr5           ( 367)  257 66.2 2.7e-11
CCDS11320.1 DUSP14 gene_id:11072|Hs108|chr17       ( 198)  253 65.2 2.8e-11
CCDS53542.1 DUSP13 gene_id:51207|Hs108|chr10       ( 188)  249 64.3   5e-11


>>CCDS4468.1 DUSP22 gene_id:56940|Hs108|chr6              (184 aa)
 initn: 1250 init1: 1250 opt: 1250  Z-score: 1520.6  bits: 288.0 E(32554): 2.2e-78
Smith-Waterman score: 1250; 100.0% identity (100.0% similar) in 184 aa overlap (1-184:1-184)

               10        20        30        40        50        60
pF1KB6 MGNGMNKILPGLYIGNFKDARDAEQLSKNKVTHILSVHDSARPMLEGVKYLCIPAADSPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MGNGMNKILPGLYIGNFKDARDAEQLSKNKVTHILSVHDSARPMLEGVKYLCIPAADSPS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 QNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 GRSCANPNVGFQRQLQEFEKHEVHQYRQWLKEEYGESPLQDAEEAKNILAAPGILKFWAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GRSCANPNVGFQRQLQEFEKHEVHQYRQWLKEEYGESPLQDAEEAKNILAAPGILKFWAF
              130       140       150       160       170       180

           
pF1KB6 LRRL
       ::::
CCDS44 LRRL
           

>>CCDS69035.1 DUSP22 gene_id:56940|Hs108|chr6             (205 aa)
 initn: 1146 init1: 1146 opt: 1146  Z-score: 1394.2  bits: 264.8 E(32554): 2.4e-71
Smith-Waterman score: 1146; 100.0% identity (100.0% similar) in 169 aa overlap (1-169:1-169)

               10        20        30        40        50        60
pF1KB6 MGNGMNKILPGLYIGNFKDARDAEQLSKNKVTHILSVHDSARPMLEGVKYLCIPAADSPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 MGNGMNKILPGLYIGNFKDARDAEQLSKNKVTHILSVHDSARPMLEGVKYLCIPAADSPS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 QNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 QNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 GRSCANPNVGFQRQLQEFEKHEVHQYRQWLKEEYGESPLQDAEEAKNILAAPGILKFWAF
       :::::::::::::::::::::::::::::::::::::::::::::::::           
CCDS69 GRSCANPNVGFQRQLQEFEKHEVHQYRQWLKEEYGESPLQDAEEAKNILGKYKEQGRTEP
              130       140       150       160       170       180

                                
pF1KB6 LRRL                     
                                
CCDS69 QPGARRWSSFPALAPLTYDNYTTET
              190       200     

>>CCDS13193.1 DUSP15 gene_id:128853|Hs108|chr20           (235 aa)
 initn: 706 init1: 686 opt: 686  Z-score: 837.7  bits: 162.0 E(32554): 2.4e-40
Smith-Waterman score: 686; 55.0% identity (82.2% similar) in 169 aa overlap (1-169:1-169)

               10        20        30        40        50        60
pF1KB6 MGNGMNKILPGLYIGNFKDARDAEQLSKNKVTHILSVHDSARPMLEGVKYLCIPAADSPS
       :::::.:.:::::.::: ::.: .::..::.:::.:.:.: .:.:. . :: ::.::.: 
CCDS13 MGNGMTKVLPGLYLGNFIDAKDLDQLGRNKITHIISIHESPQPLLQDITYLRIPVADTPE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 QNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRA
         . .:::: :.::: ::: : .:::::.::.:::.:.: ::.:::: .::.:.:....:
CCDS13 VPIKKHFKECINFIHCCRLNGGNCLVHCFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 GRSCANPNVGFQRQLQEFEKHEVHQYRQWLKEEYGESPLQDAEEAKNILAAPGILKFWAF
        :  :::: ::..::.::     .. :. :.:..::::..: :: . .:           
CCDS13 TRPIANPNPGFRQQLEEFGWASSQKLRRQLEERFGESPFRDEEELRALLPLCKRCRQGSA
              130       140       150       160       170       180

                                                              
pF1KB6 LRRL                                                   
                                                              
CCDS13 TSASSAGPHSAASEGTVQRLVPRTPREAHRPLPLLARVKQTFSCLPRCLSRKGGK
              190       200       210       220       230     

>>CCDS82607.1 DUSP15 gene_id:128853|Hs108|chr20           (232 aa)
 initn: 659 init1: 639 opt: 643  Z-score: 785.8  bits: 152.4 E(32554): 1.9e-37
Smith-Waterman score: 643; 53.7% identity (81.5% similar) in 162 aa overlap (8-169:5-166)

               10        20        30        40        50        60
pF1KB6 MGNGMNKILPGLYIGNFKDARDAEQLSKNKVTHILSVHDSARPMLEGVKYLCIPAADSPS
              .:::::.::: ::.: .::..::.:::.:.:.: .:.:. . :: ::.::.: 
CCDS82    MTEGVLPGLYLGNFIDAKDLDQLGRNKITHIISIHESPQPLLQDITYLRIPVADTPE
                  10        20        30        40        50       

               70        80        90       100       110       120
pF1KB6 QNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRA
         . .:::: :.::: ::: : .:::::.::.:::.:.: ::.:::: .::.:.:....:
CCDS82 VPIKKHFKECINFIHCCRLNGGNCLVHCFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKA
        60        70        80        90       100       110       

              130       140       150       160       170       180
pF1KB6 GRSCANPNVGFQRQLQEFEKHEVHQYRQWLKEEYGESPLQDAEEAKNILAAPGILKFWAF
        :  :::: ::..::.::     .. :. :.:..::::..: :: . .:           
CCDS82 TRPIANPNPGFRQQLEEFGWASSQKLRRQLEERFGESPFRDEEELRALLPLCKRCRQGSA
       120       130       140       150       160       170       

                                                              
pF1KB6 LRRL                                                   
                                                              
CCDS82 TSASSAGPHSAASEGTVQRLVPRTPREAHRPLPLLARVKQTFSCLPRCLSRKGGK
       180       190       200       210       220       230  

>>CCDS82606.1 DUSP15 gene_id:128853|Hs108|chr20           (295 aa)
 initn: 572 init1: 572 opt: 572  Z-score: 698.4  bits: 136.5 E(32554): 1.4e-32
Smith-Waterman score: 572; 58.0% identity (84.7% similar) in 131 aa overlap (8-138:5-135)

               10        20        30        40        50        60
pF1KB6 MGNGMNKILPGLYIGNFKDARDAEQLSKNKVTHILSVHDSARPMLEGVKYLCIPAADSPS
              .:::::.::: ::.: .::..::.:::.:.:.: .:.:. . :: ::.::.: 
CCDS82    MTEGVLPGLYLGNFIDAKDLDQLGRNKITHIISIHESPQPLLQDITYLRIPVADTPE
                  10        20        30        40        50       

               70        80        90       100       110       120
pF1KB6 QNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRA
         . .:::: :.::: ::: : .:::::.::.:::.:.: ::.:::: .::.:.:....:
CCDS82 VPIKKHFKECINFIHCCRLNGGNCLVHCFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKA
        60        70        80        90       100       110       

              130       140       150       160       170       180
pF1KB6 GRSCANPNVGFQRQLQEFEKHEVHQYRQWLKEEYGESPLQDAEEAKNILAAPGILKFWAF
        :  :::: ::..::.::                                          
CCDS82 TRPIANPNPGFRQQLEEFGWASSQKGARHRTSKTSGAQCPPMTSATCLLAARVALLSAAL
       120       130       140       150       160       170       

>>CCDS9033.1 DUSP6 gene_id:1848|Hs108|chr12               (381 aa)
 initn: 320 init1: 267 opt: 320  Z-score: 392.2  bits: 80.2 E(32554): 1.6e-15
Smith-Waterman score: 320; 41.0% identity (67.6% similar) in 139 aa overlap (7-140:209-345)

                                       10        20        30      
pF1KB6                         MGNGMNKILPGLYIGNFKDARDAEQLSKNKVTHILS
                                     .::: ::.:  ::. . . : .  . .::.
CCDS90 DIESDLDRDPNSATDSDGSPLSNSQPSFPVEILPFLYLGCAKDSTNLDVLEEFGIKYILN
      180       190       200       210       220       230        

         40           50        60        70        80          90 
pF1KB6 VHDSARPMLEGV---KYLCIPAADSPSQNLTRHFKESIKFIHECRLRGESC--LVHCLAG
       :  .   ..:..   ::  :: .:  ::::.. : :.:.:: :   ::..:  :::::::
CCDS90 VTPNLPNLFENAGEFKYKQIPISDHWSQNLSQFFPEAISFIDEA--RGKNCGVLVHCLAG
      240       250       260       270       280         290      

             100       110       120       130       140       150 
pF1KB6 VSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQEFEKHEVHQYRQWLK
       .:::::...::.:   ... .::   :.  .:  .:: .:. :: .::.           
CCDS90 ISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDFERTLGLSSPCDNR
        300       310       320       330       340       350      

             160       170       180    
pF1KB6 EEYGESPLQDAEEAKNILAAPGILKFWAFLRRL
                                        
CCDS90 VPAQQLYFTTPSNQNVYQVDSLQST        
        360       370       380         

>>CCDS14724.1 DUSP9 gene_id:1852|Hs108|chrX               (384 aa)
 initn: 321 init1: 251 opt: 320  Z-score: 392.1  bits: 80.2 E(32554): 1.6e-15
Smith-Waterman score: 320; 39.6% identity (66.4% similar) in 149 aa overlap (7-148:206-354)

                                       10        20        30      
pF1KB6                         MGNGMNKILPGLYIGNFKDARDAEQLSKNKVTHILS
                                     .:::.::.:. .:. . :.:.:  . .::.
CCDS14 SEADRDSMSCGLDSEGATPPPVGLRASFPVQILPNLYLGSARDSANLESLAKLGIRYILN
         180       190       200       210       220       230     

         40           50        60        70        80        90   
pF1KB6 VHDSARPMLE---GVKYLCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVS
       :  .   ..:     .:  :: .:  ::::.: : :.:.:: :   .. . :::::::::
CCDS14 VTPNLPNFFEKNGDFHYKQIPISDHWSQNLSRFFPEAIEFIDEALSQNCGVLVHCLAGVS
         240       250       260       270       280       290     

           100       110       120       130       140             
pF1KB6 RSVTLVIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQEFEK----HEVHQYRQW
       ::::...::.:    .. .::   :.  .:  .:: .:. :: .::.    .: :. .: 
CCDS14 RSVTVTVAYLMQKLHLSLNDAYDLVKRKKSNISPNFNFMGQLLDFERSLRLEERHSQEQG
         300       310       320       330       340       350     

     150       160       170       180    
pF1KB6 LKEEYGESPLQDAEEAKNILAAPGILKFWAFLRRL
                                          
CCDS14 SGGQASAASNPPSFFTTPTSDGAFELAPT      
         360       370       380          

>>CCDS1528.1 DUSP10 gene_id:11221|Hs108|chr1              (482 aa)
 initn: 321 init1: 255 opt: 321  Z-score: 391.7  bits: 80.5 E(32554): 1.7e-15
Smith-Waterman score: 321; 38.8% identity (71.9% similar) in 139 aa overlap (5-140:322-460)

                                         10        20        30    
pF1KB6                           MGNGMNKILPGLYIGNFKDARDAEQLSKNKVTHI
                                     .. ::: :..:: .::.: . ... .. ..
CCDS15 ECREVGGGASAASSLLPQPIPTTPDIENAELTPILPFLFLGNEQDAQDLDTMQRLNIGYV
             300       310       320       330       340       350 

             40         50        60        70        80        90 
pF1KB6 LSV--HDSARPMLEGV-KYLCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLVHCLAG
       ..:  :     . .:. .:  .::.:: .::: ..:.:...::.: .  :.. :.:: ::
CCDS15 INVTTHLPLYHYEKGLFNYKRLPATDSNKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAG
             360       370       380       390       400       410 

             100       110       120       130       140       150 
pF1KB6 VSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQEFEKHEVHQYRQWLK
       ::::.:.::::.:  : .   :: . :.. :   .::..:. :: :::.           
CCDS15 VSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDLNNGVTPRIL
             420       430       440       450       460       470 

             160       170       180    
pF1KB6 EEYGESPLQDAEEAKNILAAPGILKFWAFLRRL
                                        
CCDS15 TPKLMGVETVV                      
             480                        

>>CCDS33766.2 DUSP7 gene_id:1849|Hs108|chr3               (419 aa)
 initn: 317 init1: 255 opt: 312  Z-score: 381.9  bits: 78.5 E(32554): 6e-15
Smith-Waterman score: 312; 40.1% identity (65.0% similar) in 137 aa overlap (7-140:247-383)

                                       10        20        30      
pF1KB6                         MGNGMNKILPGLYIGNFKDARDAEQLSKNKVTHILS
                                     .::: ::.:  ::. . . :.:  . .::.
CCDS33 SDGESDRELPSSATESDGSPVPSSQPAFPVQILPYLYLGCAKDSTNLDVLGKYGIKYILN
        220       230       240       250       260       270      

         40           50        60        70        80        90   
pF1KB6 VHDSARPMLEG---VKYLCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVS
       :  .    .:      :  :: .:  ::::.. : :.:.:: : : .  . :::::::.:
CCDS33 VTPNLPNAFEHGGEFTYKQIPISDHWSQNLSQFFPEAISFIDEARSKKCGVLVHCLAGIS
        280       290       300       310       320       330      

           100       110       120       130       140       150   
pF1KB6 RSVTLVIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQEFEKHEVHQYRQWLKEE
       ::::...::.:   ... .::   :.  .:  .:: .:. :: .::.             
CCDS33 RSVTVTVAYLMQKMNLSLNDAYDFVKRKKSNISPNFNFMGQLLDFERTLGLSSPCDNHAS
        340       350       360       370       380       390      

           160       170       180    
pF1KB6 YGESPLQDAEEAKNILAAPGILKFWAFLRRL
                                      
CCDS33 SEQLYFSTPTNHNLFPLNTLEST        
        400       410                 

>>CCDS9711.1 STYX gene_id:6815|Hs108|chr14                (223 aa)
 initn: 279 init1: 239 opt: 307  Z-score: 380.3  bits: 77.3 E(32554): 7.3e-15
Smith-Waterman score: 307; 37.8% identity (67.1% similar) in 143 aa overlap (5-139:29-171)

                                       10        20          30    
pF1KB6                         MGNGMNKILPGLYIGNFKDARDAEQ--LSKNKVTHI
                                   :..:::::..: ...:  ..   :.:. .:::
CCDS97 MEDVKLEFPSLPQCKEDAEEWTYPMRREMQEILPGLFLGPYSSAMKSKLPVLQKHGITHI
               10        20        30        40        50        60

           40              50        60        70        80        
pF1KB6 LSVHDSA-----RPMLEGV-KYLCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLVHC
       . ....      .: .. . .:: .  ::.: .:. : :  . .::      : . ::: 
CCDS97 ICIRQNIEANFIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHG
               70        80        90       100       110       120

       90       100       110       120       130       140        
pF1KB6 LAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQEFEKHEVHQYRQ
        ::.:::...:::::: .  . ..::.  :.  : : :::.:: .::::.:         
CCDS97 NAGISRSAAFVIAYIMETFGMKYRDAFAYVQERRFCINPNAGFVHQLQEYEAIYLAKLTI
              130       140       150       160       170       180

      150       160       170       180           
pF1KB6 WLKEEYGESPLQDAEEAKNILAAPGILKFWAFLRRL       
                                                  
CCDS97 QMMSPLQIERSLSVHSGTTGSLKRTHEEEDDFGTMQVATAQNG
              190       200       210       220   




184 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 15:06:44 2016 done: Fri Nov  4 15:06:45 2016
 Total Scan time:  1.870 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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