GENSCAN 1.0	Date run:  4-Nov-116	Time: 15:13:22

Sequence gi568815593r:142495293_142714127 : 218835 bp : 43.77% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    681    676    6                               1.05
 1.04 Term -    959    861   99  2  0  108   37    60 0.196   1.03
 1.03 Intr -  29218  29050  169  0  1   38   98   134 0.303   9.35
 1.02 Intr -  39465  39342  124  1  1   26   87    43 0.015  -2.36
 1.01 Init -  53420  53192  229  2  1   71   19   156 0.357   5.53
 1.00 Prom -  59271  59232   40                              -0.66

 2.03 PlyA -  59359  59354    6                               1.05
 2.02 Term -  67203  67061  143  1  2   48   52    85 0.225  -1.01
 2.01 Init -  79862  79793   70  2  1   45   89    69 0.570   3.91
 2.00 Prom -  98731  98692   40                              -2.66

 3.07 PlyA -  99368  99363    6                               1.05
 3.06 Term - 100192  99998  195  1  0   86   43   123 0.770   5.01
 3.05 Intr - 105513 105410  104  1  2   74   89   102 0.867   8.79
 3.04 Intr - 110600 110507   94  2  1  103  -24    65 0.057  -3.66
 3.03 Intr - 110880 110766  115  2  1   79   94    59 0.173   6.05
 3.02 Intr - 117644 117515  130  0  1   62   51    61 0.224  -0.45
 3.01 Init - 118835 118667  169  2  1   89   72   186 0.996  16.80
 3.00 Prom - 125372 125333   40                              -4.96

 4.00 Prom + 125457 125496   40                              -2.66
 4.01 Init + 157041 157097   57  2  0   61  109    34 0.367   4.11
 4.02 Intr + 160440 160607  168  2  0  -18   85   164 0.354   5.64
 4.03 Intr + 164843 164888   46  1  1   49   64   116 0.039   3.28
 4.04 Term + 189926 190278  353  0  2  106   54   145 0.692   7.55
 4.05 PlyA + 195054 195059    6                               1.05

 5.04 PlyA - 195658 195653    6                               1.05
 5.03 Term - 201310 201203  108  1  0  113   39    32 0.362  -0.69
 5.02 Intr - 202550 202330  221  0  2   60  105    22 0.255  -0.88
 5.01 Init - 207691 207643   49  1  1   78   71    57 0.619   4.11
 5.00 Prom - 210314 210275   40                              -2.66


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:142495293_142714127|GENSCAN_predicted_peptide_1|206_aa
MKISAEQMQKEYTDVQIQDKDFHLVLSIYPSSSLDIGDKEKTNKQKNSIISIITTTTAAY
TLRLLLKDSEKRGEVSSLSDFKPAELLGNIMPKTNTVKEIEVCLQANYAWVYDIIFVKDN
FGCYVGECIVAGINGRNTETNDEAIAIVQKKVGGSLYYGRNRRKEEKWTDSNVKAPRFPI
LAMVLQKSPESLKALQAVQCVQEICG

>gi568815593r:142495293_142714127|GENSCAN_predicted_CDS_1|621_bp
atgaaaatatcagcagagcagatgcaaaaagagtacacggatgtacagatccaggacaaa
gattttcatcttgttttaagcatttatccaagcagctcgctggatattggggataaagaa
aaaacaaacaaacaaaaaaactccattatctccatcatcaccactactactgctgcatat
actctgagactgcttttaaaagattctgagaagagaggggaagtgtcaagtctttctgac
tttaaacctgctgaactactaggtaatattatgccaaaaacaaacactgtaaaggaaata
gaagtatgccttcaagctaactatgcctgggtatatgacatcatatttgtaaaagataat
tttggctgctatgtgggagaatgtattgtagcagggatcaatgggagaaacacggaaacc
aatgatgaggccattgcaatagtccagaagaaagttggtggtagcttgtactacggtagg
aacaggaggaaggaagagaagtggacagattcaaatgtaaaggcccccagattccccatt
ttggccatggtccttcagaagagtccagagagcctcaaggcactacaggctgttcagtgc
gtgcaagaaatctgtggttaa

>gi568815593r:142495293_142714127|GENSCAN_predicted_peptide_2|70_aa
MELEAIILSKLTQEQKAKYHILTCFLMRSHEELSTAPRRQPANKWGPQSRSHKELNSANG
LNELGSGFFL

>gi568815593r:142495293_142714127|GENSCAN_predicted_CDS_2|213_bp
atggagctggaggccattatcctcagcaaactaacacaggaacagaaagccaaataccac
attctcacttgctttctcatgagaagccatgaagagctaagcacagctcccagaagacag
ccagccaataaatgggggcctcagtcccgcagccacaaggaactgaattctgccaacggg
ctgaatgagcttggaagtggattcttcctctga

>gi568815593r:142495293_142714127|GENSCAN_predicted_peptide_3|268_aa
MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHSGLN
YSWTMHQRLQALRTNDHFAGAHAVPSDAQVMGMDAGVYTSSKTIAAFVIVLLYHSQVHLS
VSLIMQKPQVQGPWLALSQQLQEDVGLENWNEVTLESWTPSQLHKPLSLVQLQLSAESVG
EVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEKNWFVGLK
KNGSCKRGPRTHYGQKAILFLPLPVSSD

>gi568815593r:142495293_142714127|GENSCAN_predicted_CDS_3|807_bp
atggctgaaggggaaatcaccaccttcacagccctgaccgagaagtttaatctgcctcca
gggaattacaagaagcccaaactcctctactgtagcaacgggggccacttcctgaggatc
cttccggatggcacagtggatgggacaagggacaggagcgaccagcacagtggtcttaat
tattcatggaccatgcaccagaggttgcaggctctaagaacaaatgaccacttcgctggt
gctcacgctgtaccctcagatgcacaggtaatggggatggatgctggcgtttacacgagc
tcaaaaacaattgcagcttttgttattgtgttgctgtatcactcccaggttcatttgtct
gtatccctaatcatgcagaagccccaagtgcagggaccatggctggcgctgagccagcag
ctgcaagaggatgtaggtctggaaaactggaatgaagtcacactagagagctggacacca
agccagctacacaagccgctcagcctggttcagctgcagctcagtgcggaaagcgtgggg
gaggtgtatataaagagtaccgagactggccagtacttggccatggacaccgacgggctt
ttatacggctcacagacaccaaatgaggaatgtttgttcctggaaaggctggaggagaac
cattacaacacctatatatccaagaagcatgcagagaagaattggtttgttggcctcaag
aagaatgggagctgcaaacgcggtcctcggactcactatggccagaaagcaatcttgttt
ctccccctgccagtctcttctgattaa

>gi568815593r:142495293_142714127|GENSCAN_predicted_peptide_4|207_aa
MKKHKRRWDIQKSPSAMGQWPQQKKLKDVLILERESQSSFPNTENPTYPVGGSQAGAGEP
AARRGRSELSVLAALASTVRQLKTIFTLIRVPIGGVLKRGCDIPRSERKERSNPSDHGAM
GIPPYQNPELTHPDNPKLQPDFYIKRLIKSKLPTMWTAFPRQLNIQASQERASVTQHDNA
SHTHHSQTHRSFLLLPNLKGCIQHFSK

>gi568815593r:142495293_142714127|GENSCAN_predicted_CDS_4|624_bp
atgaagaaacacaagaggcgctgggacattcagaagtcacctagtgctatggggcagtgg
ccacagcagaagaagctgaaggatgtgctgatattggaacgggagagccagagcagcttt
ccaaacactgaaaacccgacttatcctgtgggcgggagccaggctggtgcaggggagccc
gcagccagaagagggcgctccgagctcagtgtgctggccgcgctggcctcaactgtgcgg
cagctgaaaaccatcttcacgctcatccgggtgcccatcggaggggtactgaaacgagga
tgtgatattccaagatcagaaaggaaggaaagaagtaatccgagtgaccatggggccatg
ggaataccaccctaccaaaaccctgagctgacacacccagataatcctaaacttcagcct
gacttctatatcaaaaggttaataaaatctaagctgcccaccatgtggacagcttttcca
aggcagctgaatatccaggcttcccaagagagagctagtgtgacacagcacgataatgct
agccacactcaccacagccagactcaccgcagctttctgcttctgccgaacctcaagggc
tgcatccagcactttagtaaatga

>gi568815593r:142495293_142714127|GENSCAN_predicted_peptide_5|125_aa
MEMNQEEADQYERVELEREQEREDKWIQQPSLQGNQGIASFSGRTLPSDGEWELPSSCSS
LPAAVLVEQCGHCRSCHCPRKKAPQSQGKEEDLPIVKATWLQHLPADILLAQHRTRTGAS
LSSSS

>gi568815593r:142495293_142714127|GENSCAN_predicted_CDS_5|378_bp
atggagatgaaccaggaagaagctgatcagtatgaaagggtggaattagaaagggagcag
gagagagaggacaagtggatccaacagccttcgctccaggggaatcagggcatcgcctcc
ttttctgggaggacactcccttctgatggtgaatgggaactcccttcctcctgcagcagc
ctgcctgcagctgtcctggtagaacagtgtggacattgcagaagctgtcactgccccaga
aagaaagcaccccagagccaaggcaaagaggaagacctgcccattgtgaaggccacatgg
ctgcagcacctcccagctgacatcctactagcacagcaccgtacaagaacaggtgcttcc
ctttctagttctagctag