Result of FASTA (ccds) for pF1KB6476
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6476, 355 aa
  1>>>pF1KB6476 355 - 355 aa - 355 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.4080+/-0.00117; mu= 6.7114+/- 0.069
 mean_var=146.1146+/-29.874, 0's: 0 Z-trim(106.0): 152  B-trim: 32 in 1/52
 Lambda= 0.106103
 statistics sampled from 8536 (8707) to 8536 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.636), E-opt: 0.2 (0.267), width:  16
 Scan time:  2.490

The best scores are:                                      opt bits E(32554)
CCDS73772.1 SH3GL3 gene_id:6457|Hs108|chr15        ( 355) 2321 367.3 1.1e-101
CCDS10325.2 SH3GL3 gene_id:6457|Hs108|chr15        ( 347) 2162 342.9 2.3e-94
CCDS6483.1 SH3GL2 gene_id:6456|Hs108|chr9          ( 352) 1532 246.5 2.5e-65
CCDS32874.1 SH3GL1 gene_id:6455|Hs108|chr19        ( 368) 1184 193.2 2.9e-49
CCDS56076.1 SH3GL1 gene_id:6455|Hs108|chr19        ( 320)  708 120.3 2.2e-27
CCDS59335.1 SH3GL1 gene_id:6455|Hs108|chr19        ( 304)  545 95.4 6.9e-20


>>CCDS73772.1 SH3GL3 gene_id:6457|Hs108|chr15             (355 aa)
 initn: 2321 init1: 2321 opt: 2321  Z-score: 1938.9  bits: 367.3 E(32554): 1.1e-101
Smith-Waterman score: 2321; 100.0% identity (100.0% similar) in 355 aa overlap (1-355:1-355)

               10        20        30        40        50        60
pF1KB6 MDGIFAGIICNQANRCLTWTSQQLFSEKISGAEGTKLDDEFLDMERKIDVTNKVVAEILS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MDGIFAGIICNQANRCLTWTSQQLFSEKISGAEGTKLDDEFLDMERKIDVTNKVVAEILS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 KTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 ALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 KRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 LQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTTGSNIPMDQPCCRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTTGSNIPMDQPCCRG
              250       260       270       280       290       300

              310       320       330       340       350     
pF1KB6 LYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIVPLPQ
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIVPLPQ
              310       320       330       340       350     

>>CCDS10325.2 SH3GL3 gene_id:6457|Hs108|chr15             (347 aa)
 initn: 2162 init1: 2162 opt: 2162  Z-score: 1807.5  bits: 342.9 E(32554): 2.3e-94
Smith-Waterman score: 2162; 99.4% identity (100.0% similar) in 335 aa overlap (21-355:13-347)

               10        20        30        40        50        60
pF1KB6 MDGIFAGIICNQANRCLTWTSQQLFSEKISGAEGTKLDDEFLDMERKIDVTNKVVAEILS
                           ..::::::::::::::::::::::::::::::::::::::
CCDS10         MSVAGLKKQFHKASQLFSEKISGAEGTKLDDEFLDMERKIDVTNKVVAEILS
                       10        20        30        40        50  

               70        80        90       100       110       120
pF1KB6 KTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 KTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGN
             60        70        80        90       100       110  

              130       140       150       160       170       180
pF1KB6 ALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKK
            120       130       140       150       160       170  

              190       200       210       220       230       240
pF1KB6 KRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 KRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEI
            180       190       200       210       220       230  

              250       260       270       280       290       300
pF1KB6 LQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTTGSNIPMDQPCCRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTTGSNIPMDQPCCRG
            240       250       260       270       280       290  

              310       320       330       340       350     
pF1KB6 LYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIVPLPQ
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIVPLPQ
            300       310       320       330       340       

>>CCDS6483.1 SH3GL2 gene_id:6456|Hs108|chr9               (352 aa)
 initn: 1554 init1: 1124 opt: 1532  Z-score: 1286.2  bits: 246.5 E(32554): 2.5e-65
Smith-Waterman score: 1532; 67.1% identity (87.1% similar) in 340 aa overlap (23-355:15-352)

               10        20        30        40        50        60
pF1KB6 MDGIFAGIICNQANRCLTWTSQQLFSEKISGAEGTKLDDEFLDMERKIDVTNKVVAEILS
                             :  :::..:::::::::.: .::::.:::...: ::..
CCDS64         MSVAGLKKQFHKATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMT
                       10        20        30        40        50  

               70        80        90       100       110       120
pF1KB6 KTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGN
       :: :::::::: ::::.:.::.:::::: :  ::::.:.::.. :::.:.:::.: .:: 
CCDS64 KTIEYLQPNPASRAKLSMINTMSKIRGQEKGPGYPQAEALLAEAMLKFGRELGDDCNFGP
             60        70        80        90       100       110  

              130       140       150       160       170       180
pF1KB6 ALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKK
       :: ::::.:. ..::::::::.:::.:::::: :.::::.:: ::::::::::::.::::
CCDS64 ALGEVGEAMRELSEVKDSLDIEVKQNFIDPLQNLHDKDLREIQHHLKKLEGRRLDFDYKK
            120       130       140       150       160       170  

              190       200       210       220       230       240
pF1KB6 KRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEI
       :: :::::::.:::.:::.::::.:: ::::.:: :.::::::.....: :.::.:...:
CCDS64 KRQGKIPDEELRQALEKFDESKEIAESSMFNLLEMDIEQVSQLSALVQAQLEYHKQAVQI
            180       190       200       210       220       230  

              250       260              270       280       290   
pF1KB6 LQELQSKLQMRISAASSVPRREYKPRP-------VKRSSSELNGVSTTSVVKTTGSNIPM
       ::..  .:. ::  ::: :::::.:.:       .  :..  .:.: :.. : .:  . :
CCDS64 LQQVTVRLEERIRQASSQPRREYQPKPRMSLEFPTGDSTQPNGGLSHTGTPKPSG--VQM
            240       250       260       270       280         290

           300       310       320       330       340       350   
pF1KB6 DQPCCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIVPL
       ::::::.::::::::.:::::::::::::::::::::::::.::.::::::::::..: :
CCDS64 DQPCCRALYDFEPENEGELGFKEGDIITLTNQIDENWYEGMLHGHSGFFPINYVEILVAL
              300       310       320       330       340       350

         
pF1KB6 PQ
       :.
CCDS64 PH
         

>>CCDS32874.1 SH3GL1 gene_id:6455|Hs108|chr19             (368 aa)
 initn: 1562 init1: 1184 opt: 1184  Z-score: 998.0  bits: 193.2 E(32554): 2.9e-49
Smith-Waterman score: 1528; 64.7% identity (84.4% similar) in 360 aa overlap (19-355:11-368)

               10        20        30        40        50        60
pF1KB6 MDGIFAGIICNQANRCLTWTSQQLFSEKISGAEGTKLDDEFLDMERKIDVTNKVVAEILS
                         . ..:: :::..:::::::::.: .::.:.:::.:.:.:.:.
CCDS32         MSVAGLKKQFYKASQLVSEKVGGAEGTKLDDDFKEMEKKVDVTSKAVTEVLA
                       10        20        30        40        50  

               70        80        90       100       110       120
pF1KB6 KTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGN
       .: :::::::: :::: :::::::::::::. ::::.:::::.::...::::: .:.::.
CCDS32 RTIEYLQPNPASRAKLTMLNTVSKIRGQVKNPGYPQSEGLLGECMIRHGKELGGESNFGD
             60        70        80        90       100       110  

              130       140       150       160       170       180
pF1KB6 ALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKK
       ::...::::: .:::::::::.:::.:::::: : .:::::: ::::::::::::.::::
CCDS32 ALLDAGESMKRLAEVKDSLDIEVKQNFIDPLQNLCEKDLKEIQHHLKKLEGRRLDFDYKK
            120       130       140       150       160       170  

              190       200       210       220       230       240
pF1KB6 KRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEI
       :: :::::::.:::.::::::::.:: :: :.::.:.::::::.....: ::::::...:
CCDS32 KRQGKIPDEELRQALEKFEESKEVAETSMHNLLETDIEQVSQLSALVDAQLDYHRQAVQI
            180       190       200       210       220       230  

              250       260       270                      280     
pF1KB6 LQELQSKLQMRISAASSVPRREYKPRPVKRSSSEL------NG---------VSTTSVVK
       :.::  ::. :.  ::: :.:::::.:  :   .:      ::         ....:  .
CCDS32 LDELAEKLKRRMREASSRPKREYKPKP--REPFDLGEPEQSNGGFPCTTAPKIAASSSFR
            240       250         260       270       280       290

         290               300       310       320       330       
pF1KB6 TTGSNI--------PMDQPCCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHG
       .. . :        :.::: :..::::::::.:::::.:::.:::::::::::::::. :
CCDS32 SSDKPIRTPSRSMPPLDQPSCKALYDFEPENDGELGFHEGDVITLTNQIDENWYEGMLDG
              300       310       320       330       340       350

       340       350     
pF1KB6 ESGFFPINYVEVIVPLPQ
       .:::::..::::.:::::
CCDS32 QSGFFPLSYVEVLVPLPQ
              360        

>>CCDS56076.1 SH3GL1 gene_id:6455|Hs108|chr19             (320 aa)
 initn: 1306 init1: 708 opt: 708  Z-score: 605.1  bits: 120.3 E(32554): 2.2e-27
Smith-Waterman score: 1180; 54.7% identity (72.2% similar) in 360 aa overlap (19-355:11-320)

               10        20        30        40        50        60
pF1KB6 MDGIFAGIICNQANRCLTWTSQQLFSEKISGAEGTKLDDEFLDMERKIDVTNKVVAEILS
                         . ..:: :::..:::::::::.: .::.:.:::.:.:.:.:.
CCDS56         MSVAGLKKQFYKASQLVSEKVGGAEGTKLDDDFKEMEKKVDVTSKAVTEVLA
                       10        20        30        40        50  

               70        80        90       100       110       120
pF1KB6 KTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGN
       .: :::::::                                                :.
CCDS56 RTIEYLQPNP------------------------------------------------GD
             60                                                    

              130       140       150       160       170       180
pF1KB6 ALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKK
       ::...::::: .:::::::::.:::.:::::: : .:::::: ::::::::::::.::::
CCDS56 ALLDAGESMKRLAEVKDSLDIEVKQNFIDPLQNLCEKDLKEIQHHLKKLEGRRLDFDYKK
           70        80        90       100       110       120    

              190       200       210       220       230       240
pF1KB6 KRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEI
       :: :::::::.:::.::::::::.:: :: :.::.:.::::::.....: ::::::...:
CCDS56 KRQGKIPDEELRQALEKFEESKEVAETSMHNLLETDIEQVSQLSALVDAQLDYHRQAVQI
          130       140       150       160       170       180    

              250       260       270                      280     
pF1KB6 LQELQSKLQMRISAASSVPRREYKPRPVKRSSSEL------NG---------VSTTSVVK
       :.::  ::. :.  ::: :.:::::.:  :   .:      ::         ....:  .
CCDS56 LDELAEKLKRRMREASSRPKREYKPKP--REPFDLGEPEQSNGGFPCTTAPKIAASSSFR
          190       200       210         220       230       240  

         290               300       310       320       330       
pF1KB6 TTGSNI--------PMDQPCCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHG
       .. . :        :.::: :..::::::::.:::::.:::.:::::::::::::::. :
CCDS56 SSDKPIRTPSRSMPPLDQPSCKALYDFEPENDGELGFHEGDVITLTNQIDENWYEGMLDG
            250       260       270       280       290       300  

       340       350     
pF1KB6 ESGFFPINYVEVIVPLPQ
       .:::::..::::.:::::
CCDS56 QSGFFPLSYVEVLVPLPQ
            310       320

>>CCDS59335.1 SH3GL1 gene_id:6455|Hs108|chr19             (304 aa)
 initn: 923 init1: 545 opt: 545  Z-score: 470.6  bits: 95.4 E(32554): 6.9e-20
Smith-Waterman score: 1070; 51.9% identity (67.8% similar) in 360 aa overlap (19-355:11-304)

               10        20        30        40        50        60
pF1KB6 MDGIFAGIICNQANRCLTWTSQQLFSEKISGAEGTKLDDEFLDMERKIDVTNKVVAEILS
                         . ..:: :::..:::::::::.: .::.:.:::.:.:.:.:.
CCDS59         MSVAGLKKQFYKASQLVSEKVGGAEGTKLDDDFKEMEKKVDVTSKAVTEVLA
                       10        20        30        40        50  

               70        80        90       100       110       120
pF1KB6 KTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGN
       .: :::::::: :::: :::::::::::             . :                
CCDS59 RTIEYLQPNPASRAKLTMLNTVSKIRGQ-------------NLC----------------
             60        70        80                                

              130       140       150       160       170       180
pF1KB6 ALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKK
                                          .:::::: ::::::::::::.::::
CCDS59 -----------------------------------EKDLKEIQHHLKKLEGRRLDFDYKK
                                               90       100        

              190       200       210       220       230       240
pF1KB6 KRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEI
       :: :::::::.:::.::::::::.:: :: :.::.:.::::::.....: ::::::...:
CCDS59 KRQGKIPDEELRQALEKFEESKEVAETSMHNLLETDIEQVSQLSALVDAQLDYHRQAVQI
      110       120       130       140       150       160        

              250       260       270                      280     
pF1KB6 LQELQSKLQMRISAASSVPRREYKPRPVKRSSSEL------NG---------VSTTSVVK
       :.::  ::. :.  ::: :.:::::.:  :   .:      ::         ....:  .
CCDS59 LDELAEKLKRRMREASSRPKREYKPKP--REPFDLGEPEQSNGGFPCTTAPKIAASSSFR
      170       180       190         200       210       220      

         290               300       310       320       330       
pF1KB6 TTGSNI--------PMDQPCCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHG
       .. . :        :.::: :..::::::::.:::::.:::.:::::::::::::::. :
CCDS59 SSDKPIRTPSRSMPPLDQPSCKALYDFEPENDGELGFHEGDVITLTNQIDENWYEGMLDG
        230       240       250       260       270       280      

       340       350     
pF1KB6 ESGFFPINYVEVIVPLPQ
       .:::::..::::.:::::
CCDS59 QSGFFPLSYVEVLVPLPQ
        290       300    




355 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 16:26:14 2016 done: Fri Nov  4 16:26:14 2016
 Total Scan time:  2.490 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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