GENSCAN 1.0	Date run:  4-Nov-116	Time: 17:06:37

Sequence gi568815595r:109228889_109437517 : 208629 bp : 41.96% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    726    882  157  2  1   70   38   118 0.638   5.12
 1.02 Intr +   5479   5592  114  2  0   57   71    98 0.368   4.50
 1.03 Term +   8026   8714  689  2  2   32   37   195 0.282   1.58
 1.04 PlyA +   9904   9909    6                               1.05

 2.00 Prom +  13741  13780   40                              -6.65
 2.01 Init +  17282  17332   51  1  0   80   90    26 0.023   3.22
 2.02 Term +  35597  35800  204  1  0  -33   55   445 0.880  25.49
 2.03 PlyA +  36015  36020    6                               1.05

 3.16 PlyA -  41486  41481    6                               1.05
 3.15 Term -  42144  42058   87  0  0   16   43   343 0.823  19.28
 3.14 Intr -  51092  50936  157  1  1   84   22   104 0.512   2.49
 3.13 Intr -  75626  75587   40  0  1   97   76    21 0.049  -1.84
 3.12 Intr -  75782  75705   78  0  0  107   71    12 0.115   0.00
 3.11 Intr -  79405  79144  262  1  1   76   99   194 0.771  15.44
 3.10 Intr -  80191  80108   84  1  0   88   98    72 0.985   7.30
 3.09 Intr -  80442  80282  161  1  2   83   96    75 0.994   6.59
 3.08 Intr -  83804  83597  208  2  1   73   69   205 0.558  14.83
 3.07 Intr -  85819  85622  198  1  0   34  115   111 0.202   7.03
 3.06 Intr - 100200 100088  113  1  2   87   70    49 0.562   2.18
 3.05 Intr - 101924 101636  289  2  1   66  107   207 0.662  16.30
 3.04 Intr - 102896 102846   51  2  0   73   88    35 0.532   0.19
 3.03 Intr - 103143 102983  161  1  2   79   94   131 0.999  11.59
 3.02 Intr - 105105 104982  124  0  1   90  116    84 0.920  10.64
 3.01 Init - 108629 108576   54  2  0   67   78    56 0.614   3.83
 3.00 Prom - 120038 119999   40                              -4.15

 4.03 PlyA - 121470 121465    6                               1.05
 4.02 Term - 135354 135150  205  2  1  -15   52   251 0.639   7.06
 4.01 Init - 135533 135400  134  2  2   65  105   117 0.941  10.76
 4.00 Prom - 137589 137550   40                              -5.45

 5.06 PlyA - 138040 138035    6                               1.05
 5.05 Term - 143976 143869  108  0  0  106   38    55 0.222  -0.17
 5.04 Intr - 167764 167642  123  1  0   66   82   112 0.737   8.26
 5.03 Intr - 170056 169976   81  1  0   45   87    63 0.481   0.82
 5.02 Intr - 173994 173936   59  1  2  110   72     3 0.180  -1.42
 5.01 Init - 178837 178063  775  1  1   70   28   220 0.159   9.22
 5.00 Prom - 180193 180154   40                              -5.35

 6.04 PlyA - 180430 180425    6                              -0.45
 6.03 Term - 181181 180790  392  0  2   -4   48   428 0.885  23.76
 6.02 Intr - 181304 181220   85  2  1    4   84   139 0.627   3.57
 6.01 Init - 196953 196795  159  0  0   60   75   119 0.274   7.67

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:109228889_109437517|GENSCAN_predicted_peptide_1|319_aa
MEISSEDEAKSHQTAETAVKQAISTTQNKVCADISIPLTYIKGINRYSHFKPKNCNPQIG
RSHSGAQATRALSLNGSMQILNSHWVKTDLNRSMRQKINKDIQDFNSALDQMDLIDIYRT
LHPKTTEYTFFSVPHGTYSKIDHIIGSTTLLSKCKRTEIITDNLSDHNAIKSELRIKKLI
QNHTTTWKLNNLLLNDSWVNNEIKAEIKKFFETNKNKETIYQNLWNTAKAVLRGKFIALN
AHIRKLERSQINTLASQLKELEEQEQKKKKKEKNPKARKRQEITKIRAELKEIETKKKSS
KKINESSSWIFEKINKIDH

>gi568815595r:109228889_109437517|GENSCAN_predicted_CDS_1|960_bp
atggaaatctcttctgaggacgaagccaagagccatcagacagcagagacagctgtgaaa
caggccatctctacaactcagaataaggtctgtgcagatatttctatacctctcacttac
ataaaaggcataaaccggtactctcatttcaagcctaaaaactgcaacccacagatcgga
agatcccactcgggagcccaggccaccagggccttgagtctcaatggaagcatgcagatt
ctcaacagccattgggttaaaaccgacctaaacagatcaatgagacagaaaattaacaag
gatattcaggacttcaactcagctctggatcaaatggacctaatagatatctacagaact
ctccaccccaaaacaacagaatatacattcttctcagtgccacatggcacttactctaaa
attgaccacataattggaagtacaacactcctcagcaaatgcaaaagaactgaaatcata
acagacaatctctcagaccacaatgcaatcaaatcagaactcaggattaagaaactcatt
caaaaccacacaactacatggaaattgaacaacctgctcctgaatgactcctgggtaaat
aatgaaattaaagcagaaatcaagaagttctttgaaaccaataagaacaaagaaacaata
tatcagaatctctggaacacagctaaagcagtgttaagagggaaatttatagcactaaat
gcccacatcagaaagctagaaagatctcaaatcaacaccctagcatcacaattaaaagaa
cttgaggagcaagagcaaaaaaaaaaaaaaaaagaaaaaaatccaaaagctaggaaaaga
caagaaataactaagatcagagcagaactgaaagagatagagacaaaaaaaaaatcttcc
aaaaaaatcaatgaatccagcagctggatttttgaaaaaattaataaaatagaccactag

>gi568815595r:109228889_109437517|GENSCAN_predicted_peptide_2|84_aa
MTSFDSRSYIQVTLMQEKKKEEEERRKEGKEGKEGKEGKEGEEGGEGEEGEEGGEGGEEG
EEGGEGGEEGEGGEEGEGGEEGGE

>gi568815595r:109228889_109437517|GENSCAN_predicted_CDS_2|255_bp
atgacctcctttgactccaggtcttacatccaggtcacgctaatgcaagagaagaagaag
gaggaggaggagaggaggaaggaagggaaggaagggaaggaagggaaggaagggaaggaa
ggagaagaaggaggagaaggagaagaaggagaagaaggaggagaaggaggagaagaagga
gaagaaggaggagaaggaggagaagaaggagaaggaggagaagaaggagaaggaggagaa
gaaggaggagaatga

>gi568815595r:109228889_109437517|GENSCAN_predicted_peptide_3|688_aa
MLRGSASSTSMEKAKGKEWTSTEKSREEDQQASNQPNSIALPGTSAKRTKEKMSIKGSKV
LCPKKKAEHTDNPRPQKKIPIPPLPSKLPPVNLIHRDILRAWCQQLKLSSKGQKLDAYKR
LCAFAYPNQKDFPSTAKEAKIRKSLQKKLKVEKGETSLQSSETHPPEVALPPVGEPPALE
NSTALLEGVNTVVVTTSAPEALLASWARISARARTPEAVESPQEASGVRWCVVHGKSLPA
DTDGWVHLQFHAGQAWVPEKQEGRKMREGKKRRKGKQELIWVTGSRRKHLLIKGESRLRE
VNYHILNIAVLAFPRVLLKMSDANLDSSKKNFLEGEVDDEESVILTLVPVKDDANMEQME
PSVSSTSDVKLEKPKKYNPGMRTGIAQLVTPTTLGSPGKSHLLQTNEQFTAPQKARCKIP
ALPLPTILPPINKVCRDTLRDWCQQLGLSTNGKKIEVYLRLHRHAYPEQRQVSNECVDGV
KDMPEMSQETRLQRCSRKRKAVTKRARLQRSYEMNERAEETNTVEVITSAPGAMLASWAR
IAARAVQPKALNSCSIPVSVEAFLMQASGVRWCVVHGRLLSADTKGWVRLQFHAGIEDNM
LCPDCAKRYSEENTDVAVKQSHRQVLALSLTSFEKAGALLTLPQPVSSTGVFLIRLGRCF
LLDDDDDDDDDGDDDDDDDGDDDDDVGL

>gi568815595r:109228889_109437517|GENSCAN_predicted_CDS_3|2067_bp
atgttgcgaggctccgcttcttctacaagtatggagaaggcaaaaggcaaggagtggacc
tccacagagaagtcgagggaagaggatcagcaggcttctaatcaaccaaattcaattgct
ttgccaggaacatcagcaaagagaaccaaagaaaaaatgtctatcaaaggcagtaaagtg
ctctgccctaagaaaaaggcagagcacactgacaaccccagacctcagaagaagatacca
atccctccattaccttctaaactgccacctgttaatctgattcaccgggacattctgcgg
gcctggtgccaacaattgaagctgagctccaaaggccagaaattggatgcatataagcgc
ctgtgtgcctttgcctacccaaatcaaaaggattttcctagcacagcaaaagaggccaaa
atccggaaatcattgcaaaaaaaattaaaggtggaaaagggggaaacgtccctgcaaagt
tctgagacacatcctcctgaagtggctcttcctcctgtgggggagccgcctgccctggaa
aattccactgctctccttgagggagttaatacagttgtggtgacaacttctgccccagag
gctttgctggcctcctgggcgagaatttcagccagggcgaggacaccagaggcagtggaa
tctccacaagaggcctctggtgtcaggtggtgtgtggtccatgggaaaagtctccctgca
gacacagatggttgggttcacctgcagtttcatgctggtcaagcctgggttccagaaaag
caagaagggagaaaaatgagggagggcaaaaagaggaggaaaggaaaacaagagctcatc
tgggtaacaggaagtagaaggaaacatttgcttataaaaggagaaagcaggttaagagaa
gtaaactaccatatccttaacattgctgtccttgccttccccagggtgttgctgaaaatg
tcagatgcaaatttggatagcagcaagaagaatttcttggagggggaagtagatgatgag
gaaagtgtgattttgacactggtgccagttaaagatgacgcaaatatggaacaaatggaa
ccaagcgtttcttcaacttctgatgtcaaactggagaagcctaagaaatacaatccaggt
atgaggacagggattgctcagttagttactcctacaactctgggaagcccaggaaaaagt
catctacttcaaacaaatgagcaatttacagctccacaaaaagctagatgcaaaatacca
gcccttcccttgccgaccattttgcctcccattaataaggtgtgtcgggacactttgcgg
gactggtgtcaacaactcggtttgagtactaatggcaagaaaatcgaagtttatctgagg
cttcataggcatgcttaccctgaacaacggcaagtgagtaatgagtgtgttgatggtgtg
aaggatatgcctgaaatgtcacaagagaccagattacagcgatgttcgaggaaacgcaag
gcagtgaccaagagagcaaggcttcagagaagttatgagatgaatgagagagcagaagag
accaatacagttgaagtgataacttcagcaccgggagccatgttggcatcatgggcaaga
attgctgcaagagctgttcagcctaaggctttgaattcatgttccattcctgtttctgtt
gaggcctttttgatgcaagcctctggcgtcaggtggtgtgtggtccatggcagacttctc
tcggcagacacaaagggttgggtacgcctgcagtttcatgcaggcatagaagataatatg
ttatgccccgactgtgctaagaggtatagtgaagagaatactgatgttgcagttaaacag
agccatcgtcaagtcctggctttatcacttaccagctttgagaaagcaggggcgctcctc
acgctccctcagcctgtttcctcaacaggggtgtttcttatcagattgggccgttgtttt
ctcctagatgatgatgatgatgatgatgatgatggtgatgatgatgatgatgatgatggt
gatgatgatgatgatgttggcctataa

>gi568815595r:109228889_109437517|GENSCAN_predicted_peptide_4|112_aa
MHSLDLAVNPRVPSGWALPTATLESSSQDFALPYGPWPPPGQPRSIQNPRDMIQEVCGSH
PYELHAMELLKDSKHQTGPQVHQEKGGNTRPCQEAAGGAATQSGCYEEIAKN

>gi568815595r:109228889_109437517|GENSCAN_predicted_CDS_4|339_bp
atgcatagtttagatctagctgtgaatcctagagttccaagtggctgggcccttcccaca
gctaccctggagagcagcagccaggactttgcgctaccctatggcccatggcctccacca
gggcaaccaagaagcatacaaaatccaagggacatgatccaagaggtgtgtggctctcac
ccttacgagctgcatgccatggagctgctcaaggactccaagcaccaaacgggccctcaa
gttcaccaagaaaagggtgggaacacacgtccatgtcaagaagcagcaggaggagctgcg
acccagtctggctgctatgaggaaattgccaagaactga

>gi568815595r:109228889_109437517|GENSCAN_predicted_peptide_5|381_aa
MDKFLDTYTLPRLNQEEVESLNRPITSSEIQAVINSLPTKKSPGLDRFTAEFYQRYKEEL
VPFLLKLFQTKEKEGILSNSFYEASIILIPKPGRDTTKKENLKPISLMNINAKILNKILA
NQIQQHIKKLIHHDQVGFIPGMQGWFDICKSTKVIHHINRTNDKNHMIISIDAEKAFDKI
QHPFMLKTLNKLGIDGTYFKIIRAIYDRPTASIIPNGQKLHSFPLKTDTRQGCPLSPLLF
NTVLEVLARAIRQEKEIKGAKFPKNCLAGAVGCMTLYKPHPPATGDQEKKSRKSGKQSLI
PALAQKHTAFSATRSPGASWSAQQAVLEESAFVSSAKHTREESPEQKMLNSPTSGCATTL
VNHLQDSGELDFPMSVDFCLF

>gi568815595r:109228889_109437517|GENSCAN_predicted_CDS_5|1146_bp
atggataagttcctggacacatacaccctcccaagactaaaccaggaagaagtcgaatcc
ctgaatagaccaataacaagttctgaaattcaggcagtaattaatagcctaccaaccaaa
aaaagtccaggactagacagattcacagccgaattctaccagaggtacaaagaggagctg
gtaccattccttctgaaactattccaaacaaaagaaaaagagggaatcctctctaactca
ttttatgaggccagcatcatcctgataccaaagcctggcagagacacaacaaaaaaagaa
aacttgaagccaatatccctgatgaatatcaatgcgaaaatcctcaataaaatactggca
aaccaaatccagcagcacatcaaaaagcttatccaccacgatcaagtcggcttcatccct
gggatgcaaggctggtttgacatatgcaaatcaacaaaagtaatccatcacataaacaga
accaatgacaaaaaccacatgattatctcaatagatgcagaaaaggccttcgataaaatt
caacaccccttcatgctaaaaacactcaataaactaggtattgatggaacatatttcaaa
ataataagagctatttatgacagacccacagccagtatcataccgaatgggcaaaagctg
cactcattccctttgaaaaccgacacaagacagggatgccctctctcaccactcctattc
aacacagtgttggaagttctggccagggcaatcaggcaagagaaagaaataaagggtgcc
aaatttcccaagaattgtttagctggagcagttgggtgtatgacactctataagcctcac
cctcctgccactggtgatcaagagaagaaaagcagaaagagtgggaagcagtcactaatt
ccagcactggcccagaaacacacggcattttccgctacacggagcccaggcgcctcgtgg
tcggcccagcaggcggtgctagaggagagcgcgtttgtgagcagcgccaagcacacgcgg
gaagaaagccctgagcaaaaaatgctaaactctcctacctctggctgtgctacaacttta
gtgaatcacttgcaggactctggtgaactagattttcccatgtctgtggacttttgtctt
ttctga

>gi568815595r:109228889_109437517|GENSCAN_predicted_peptide_6|211_aa
MLNIISYQGSANQNHNAIPPYFCKNGHNQKNQKIIDVGVDVVNKENLYNANGNPPPHRHA
AITLQRQRCLWLAELQLKDKGADCLQIDRKAARKQLGTKAAHKSAPSTGGVKKPHHYRPG
TVALREIRRYQKATELLIRKLRFQRLVQEIAQDLKTDLRFQSAAIGALQEASEAYLVGLF
EDSNLCAIHAKRLTIMPKEIQLARRIQGKRA

>gi568815595r:109228889_109437517|GENSCAN_predicted_CDS_6|636_bp
atgctcaacatcattagttatcagggaagtgcaaatcaaaaccacaatgcaataccacct
tacttctgcaagaatggccataatcaaaaaaatcaaaaaataatagatgttggtgtggat
gtggtgaacaaggaaaacctctacaatgctaatggtaatccgccgccgcaccgccatgcc
gccatcactctccaacgccagcgctgcctctggctcgcagagctccagctgaaggataag
ggagcggactgcctgcaaatcgaccgtaaagcagccaggaagcaactgggtacaaaagcc
gctcacaagagtgcgccctctactggaggggtgaagaaacctcatcattacaggcctggt
actgtggcactccgtgaaatcagacgttatcagaaggccactgaacttctgattcgcaaa
cttcgctttcagcgtctggtgcaagaaattgctcaggacttgaaaacagatctacgcttc
cagagtgcagctattggagctttgcaggaggcaagtgaggcctacctggttggccttttt
gaagacagcaacctgtgtgctatccatgccaaacggctaactattatgccaaaagaaatc
cagctagcacgccgcatacaaggaaaacgtgcttaa