GENSCAN 1.0	Date run:  4-Nov-116	Time: 17:32:18

Sequence gi568815584r:35302016_35504644 : 202629 bp : 44.08% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5979   6073   95  1  2   86   95    32 0.805   3.38
 1.02 Intr +   6899   6980   82  1  1   83   91    26 0.900   1.61
 1.03 Intr +   8725   8880  156  2  0   43   81   141 0.981   8.88
 1.04 Intr +  10866  11044  179  1  2  118  100    49 0.992   8.74
 1.05 Intr +  12346  12440   95  0  2   78  109    38 0.949   3.66
 1.06 Intr +  29937  30018   82  0  1   79   23    55 0.059  -2.26
 1.07 Intr +  30539  30608   70  1  1   77   78    67 0.133   3.35
 1.08 Intr +  37431  37514   84  1  0   67   67    55 0.494   1.09
 1.09 Intr +  38785  38883   99  2  0  113   80   -11 0.286   0.68
 1.10 Intr +  39713  39750   38  0  2  125   66   -14 0.173  -1.92
 1.11 Term +  50700  50774   75  2  0   85   47   133 0.613   6.74
 1.12 PlyA +  55295  55300    6                               1.05

 2.00 Prom +  56983  57022   40                              -4.26
 2.01 Init +  65839  65899   61  0  1   51   76    83 0.904   4.83
 2.02 Term +  67283  67569  287  0  2   36   42   213 0.840   7.07
 2.03 PlyA +  69105  69110    6                               1.05

 3.04 PlyA -  72901  72896    6                               1.05
 3.03 Term -  86328  86106  223  2  1   41   41   306 0.411  17.59
 3.02 Intr -  86909  86330  580  0  1   39   20   500 0.378  30.06
 3.01 Init -  88808  88724   85  2  1   69  100    68 0.566   7.38
 3.00 Prom -  98025  97986   40                              -7.56

 4.08 PlyA -  98588  98583    6                               1.05
 4.07 Term - 100045  99998   48  1  0  107   53    58 0.853   1.50
 4.06 Intr - 100648 100379  270  1  0   76  105   304 0.895  28.64
 4.05 Intr - 100844 100756   89  0  2  105   77   115 0.916  11.79
 4.04 Intr - 101345 101135  211  2  1   91   80   146 0.992  12.59
 4.03 Intr - 101783 101675  109  1  1  132   85   216 0.999  25.99
 4.02 Intr - 102857 102403  455  2  2   87   99   613 0.683  54.36
 4.01 Init - 111724 111662   63  1  0   81   41    57 0.441   1.45
 4.00 Prom - 112558 112519   40                              -4.16

 5.00 Prom + 118105 118144   40                              -2.86
 5.01 Sngl + 128353 128616  264  0  0   46   47   306 0.450  17.50
 5.02 PlyA + 129298 129303    6                               1.05

 6.03 PlyA - 129392 129387    6                               1.05
 6.02 Term - 172605 172320  286  2  1   50   38   354 0.992  21.48
 6.01 Init - 177977 177925   53  2  2   96   87    63 0.998   7.63

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  15234  15291   58  0  1  126   41    38 0.858   0.06


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:35302016_35504644|GENSCAN_predicted_peptide_1|351_aa
XYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTA
DSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDE
EQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTV
LSIDFKPSEIEVGVVTVENPKFRACGSSTGPCCSPLSLRGLSHIQRYEGNELIQVLIKRE
GKKLSVKMAVLAFWFLLEYSSLSTDCIAISYNCLEAKDLGTGAGNTGVSHRGGHEKGLEI
PFWKSKIHVNYVRAEFTTQEARPAGWEAFVESTKDKHSLAVKPVGACMLRT

>gi568815584r:35302016_35504644|GENSCAN_predicted_CDS_1|1056_bp
naatatgcttttaaggctattaaccagggtggccttacatcagtagctgtcagagggaaa
gactgtgcagtaattgtcacacagaagaaagtacctgacaaattattggattccagcaca
gtgactcacttattcaagataactgaaaacattggttgtgtgatgaccggaatgacagct
gacagcagatcccaggtacagagggcacgctatgaggcagctaactggaaatacaagtat
ggctatgagattcctgtggacatgctgtgtaaaagaattgccgatatttctcaggtctac
acacagaatgctgaaatgaggcctcttggttgttgtatgattttaattggtatagatgaa
gagcaaggccctcaggtatataagtgtgatcctgcaggttactactgtgggtttaaagcc
actgcagcgggagttaaacaaactgagtcaaccagcttccttgaaaaaaaagtgaagaag
aaatttgattggacatttgaacagacagtggaaactgcaattacatgcctgtctactgtt
ctatcaattgatttcaaaccttcagaaatagaagttggagtagtgacagttgaaaatcct
aaattcagggcttgtggcagctccaccgggccctgctgcagccccttgtcattgagaggc
ctctcccacatccagagatacgaggggaatgaacttatacaagtcctcatcaagagggag
ggcaaaaaattgtcggtgaagatggctgtgctggcattttggtttcttctggaatattca
tctttgtccactgactgcatcgccataagctataactgcttagaggccaaggacttaggc
acaggtgctgggaatacaggcgtgagccaccgcggcggccatgaaaagggcttggagatt
cctttctggaaatctaaaatccatgtgaattatgttagggcagagttcaccacacaggag
gcaaggccagcgggctgggaggcctttgtggagagcaccaaggacaagcatagcctggct
gttaaacccgtgggcgcctgcatgctacgcacctga

>gi568815584r:35302016_35504644|GENSCAN_predicted_peptide_2|115_aa
MGPLISPGTFPYIRLQLEAFALTLVAAPRWALAFVNGSFIKLSPNTHGMRVTADSFLPVT
PAMCTKSISDPLLTPPDPVKKASMNATLHAGVSGPARSQLSGFEGTDGPGVWQCE

>gi568815584r:35302016_35504644|GENSCAN_predicted_CDS_2|348_bp
atggggccccttatctcccccggcactttcccctacatccggctgcaactagaagctttc
gcactaaccctcgtggctgccccacgctgggccctggcctttgtaaacggttcctttatt
aaactctctccaaatacccacggcatgcgtgtgacagcggactccttcctgcccgtcaca
ccggcgatgtgcacaaaaagtatctcagaccctctcctcaccccacctgatcccgtcaaa
aaggcctccatgaacgccaccctccatgctggggtctcggggcctgcaagatcccagctc
agtggatttgaaggaactgatgggcctggagtctggcagtgtgaatga

>gi568815584r:35302016_35504644|GENSCAN_predicted_peptide_3|295_aa
MKRRAVMGPPQVQAWKALDLWESSQVMEGKAVVPMGRNPMMRKATQGQLENSPALEKLLP
PLQGNVGFAFTKEDLTEVRDLLLANKVPAATRAGAIGPCEVTVPAQNTGLGPEKISFFQA
LGITTKISRGTTEILSDVQLIKTGDRVGASEATLLNTPNISPFSFGLVIQQVFNNGSIYN
PEVLDITEETLYSGFLEGVRNVASVSANWLPTCCISTPFYHHGYKGCLALSVETDYTFPP
AEKIKTFLADPSAFVAAAPVATTATAAPAAAAAPTKFENEESEELDEDMGFGLFD

>gi568815584r:35302016_35504644|GENSCAN_predicted_CDS_3|888_bp
atgaaacggagggctgtcatgggcccaccccaggtgcaagcctggaaggccctggacctc
tgggagtcctctcaagtcatggaagggaaggccgtggtgccaatgggcaggaaccccatg
atgcgcaaggccacccaaggacaactggaaaacagcccagctctggagaaactgttgcct
cctctgcaggggaatgtgggctttgcgttcaccaaggaggacctcactgaggtcagggat
ctgctgctggccaataaggtgccagctgccacccgtgctggtgccattggcccatgtgaa
gtcactgtaccagcccagaacactggtctgggacccgagaagatttcttttttccaggct
ttaggcattaccactaaaatctccaggggcaccactgaaatcctgagtgatgtgcagctg
atcaagactggagacagagtgggagccagcgaagccacactgctgaacacgccgaacatc
tctcccttctcctttgggctggtcatccagcaggtgttcaacaatggtagtatctacaac
cctgaagtgcttgacatcacagaagaaactctgtattctggcttcctggagggtgtccgc
aatgttgccagtgtgtctgcaaactggctacccacctgttgcatcagtacccccttctat
catcatgggtacaaaggatgcctggctctatctgtggagactgattacaccttcccgcct
gctgaaaagatcaagaccttcttggctgatccatctgcctttgtggctgctgcccctgtg
gccactaccgccacggctgctcctgctgctgcggcagccccaactaagtttgaaaacgag
gagtcggaggagttggatgaggatatgggatttggtctctttgactaa

>gi568815584r:35302016_35504644|GENSCAN_predicted_peptide_4|414_aa
MVQLSPHYRGDSEDGRKRMVRQRTKPVLFFWSDWLGNSPSLTPPQRNPQPAFIGRRGGAA
EPTAVRAAVPPASAPARKQRAARGPAHPQQRPQLVRAMFQAAERPQEWAMEGPRDGLKKE
RLLDDRHDSGLDSMKDEEYEQMVKELQEIRLEPQEVPRGSEPWKQQLTEDGDSFLHLAII
HEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFR
GNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLV
SLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPST
RIQQQLGQLTLENLQMLPESEDEESYDTESEFTEFTEDELPYDDCVFGGQRLTL

>gi568815584r:35302016_35504644|GENSCAN_predicted_CDS_4|1245_bp
atggtacaactcagcccgcactaccgtggggacagtgaagatggaaggaagaggatggtc
cggcagaggacgaagccagttctctttttctggtctgactggcttggaaattccccgagc
ctgaccccgccccagagaaatccccagccagcgtttatagggcgccgcggcggcgctgca
gagcccacagcagtccgtgccgccgtcccgcccgccagcgccccagcgaggaagcagcgc
gcagcccgcggcccagcgcacccgcagcagcgcccgcagctcgtccgcgccatgttccag
gcggccgagcgcccccaggagtgggccatggagggcccccgcgacgggctgaagaaggag
cggctactggacgaccgccacgacagcggcctggactccatgaaagacgaggagtacgag
cagatggtcaaggagctgcaggagatccgcctcgagccgcaggaggtgccgcgcggctcg
gagccctggaagcagcagctcaccgaggacggggactcgttcctgcacttggccatcatc
catgaagaaaaggcactgaccatggaagtgatccgccaggtgaagggagacctggccttc
ctcaacttccagaacaacctgcagcagactccactccacttggctgtgatcaccaaccag
ccagaaattgctgaggcacttctgggagctggctgtgatcctgagctccgagactttcga
ggaaatacccccctacaccttgcctgtgagcagggctgcctggccagcgtgggagtcctg
actcagtcctgcaccaccccgcacctccactccatcctgaaggctaccaactacaatggc
cacacgtgtctacacttagcctctatccatggctacctgggcatcgtggagcttttggtg
tccttgggtgctgatgtcaatgctcaggagccctgtaatggccggactgcccttcacctc
gcagtggacctgcaaaatcctgacctggtgtcactcctgttgaagtgtggggctgatgtc
aacagagttacctaccagggctattctccctaccagctcacctggggccgcccaagcacc
cggatacagcagcagctgggccagctgacactagaaaaccttcagatgctgccagagagt
gaggatgaggagagctatgacacagagtcagagttcacggagttcacagaggacgagctg
ccctatgatgactgtgtgtttggaggccagcgtctgacgttatga

>gi568815584r:35302016_35504644|GENSCAN_predicted_peptide_5|87_aa
MKLFAQLEIKRKEREAKEMHERKRQREEEIEAQEKAKREREWQKNFEEGRDGRVDSWRNF
QVNTKGKKEKKNRTFLRPPKVKMEQHE

>gi568815584r:35302016_35504644|GENSCAN_predicted_CDS_5|264_bp
atgaaactctttgctcagctggaaattaaaaggaaagagagagaagccaaagagatgcat
gaaaggaaacggcaaagggaagaagagattgaagctcaagaaaaagccaaacgagaaaga
gagtggcagaaaaactttgaggaaggtcgagatggtcgtgtggacagctggcgaaacttc
caagtcaatacaaaggggaagaaagagaagaaaaatcggaccttcctgagaccaccgaaa
gtaaaaatggagcagcatgagtga

>gi568815584r:35302016_35504644|GENSCAN_predicted_peptide_6|112_aa
MPSLEVSEREKSDVPAERRRRRRRGKEKEGRGGKRKKRKEEEEEEKEEEEEEEEEEEEEE
GEGEEERRMRRRRKKKEEGGGGGRRRRKKKKKKKKKLLHYCYYCRYHHIFSV

>gi568815584r:35302016_35504644|GENSCAN_predicted_CDS_6|339_bp
atgcccagcctggaagtttcagaaagagaaaaatcggatgttcctgcagaaagaagaagg
aggaggaggagggggaaggagaaggagggaagaggaggtaagaggaagaagaggaaggaa
gaggaagaagaggaaaaggaggaagaggaggaagaagaagaagaggaggaagaggaagaa
ggagaaggagaagaagaaagaagaatgaggaggaggaggaagaagaaagaagaaggagga
ggaggaggaagaagaagaagaaagaagaagaagaagaagaagaagaaactactacactac
tgctactactgccgctaccaccacattttttctgtctga