GENSCAN 1.0	Date run:  4-Nov-116	Time: 18:31:22

Sequence gi568815578f:31376446_31584427 : 207982 bp : 46.80% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    409    404    6                              -0.45
 1.03 Term -    994    801  194  2  2   97   48    98 0.081   4.28
 1.02 Intr -  14049  13978   72  1  0   94   97    53 0.239   6.18
 1.01 Init -  29707  29650   58  1  1   43   97   100 0.877   5.88
 1.00 Prom -  32224  32185   40                              -3.66

 2.00 Prom +  33652  33691   40                              -8.46
 2.01 Init +  37320  37450  131  2  2   70   68    78 0.717   3.62
 2.02 Intr +  43224  43378  155  0  2   45   74   120 0.869   6.02
 2.03 Term +  54783  54808   26  1  2  122   49     4 0.142  -1.71
 2.04 PlyA +  55427  55432    6                               1.05

 3.06 PlyA -  55483  55478    6                               1.05
 3.05 Term -  63730  63672   59  2  2   93   43    73 0.819   1.15
 3.04 Intr -  64029  63925  105  1  0   85   76    18 0.490   0.49
 3.03 Intr -  64550  64442  109  2  1   79   81    45 0.973   2.76
 3.02 Intr -  67378  67145  234  1  0   69   97    77 0.821   4.59
 3.01 Init -  72753  72532  222  0  0   63   98   108 0.759   7.86
 3.00 Prom -  80647  80608   40                              -5.46

 4.00 Prom +  87265  87304   40                              -3.86
 4.01 Init + 100001 100340  340  1  1   73   75   183 0.635  12.94
 4.02 Intr + 101383 101465   83  2  2   83   60   122 0.658   8.26
 4.03 Intr + 105842 106043  202  1  1   95  105   254 0.997  26.66
 4.04 Term + 107714 107985  272  0  2   69   48   355 0.999  25.25
 4.05 PlyA + 108288 108293    6                               1.05

 5.00 Prom + 111714 111753   40                              -3.26
 5.01 Init + 120704 120997  294  1  0   48   86   145 0.392   7.49
 5.02 Intr + 128950 129052  103  0  1   61   32   108 0.394   2.25
 5.03 Intr + 131446 131498   53  2  2  128   45    16 0.407  -0.07
 5.04 Intr + 138014 138289  276  1  0   63   97   426 0.801  38.71
 5.05 Intr + 151039 151137   99  0  0  115  106   137 0.920  18.51
 5.06 Intr + 161734 161816   83  0  2   95   71   106 0.899   8.04
 5.07 Intr + 165983 166138  156  2  0   98   70    43 0.809   2.63
 5.08 Intr + 168502 168590   89  1  2  134   86    65 0.993  10.51
 5.09 Intr + 170994 171247  254  1  2   68  103   111 0.502   7.75
 5.10 Intr + 172520 172669  150  1  0   81  113   108 0.128  12.96
 5.11 Intr + 172762 172887  126  0  0   63   92   207 0.999  19.48
 5.12 Intr + 173619 173676   58  2  1  146  101    98 0.999  15.36
 5.13 Intr + 177094 177111   18  2  0  102  111     1 0.566   0.38
 5.14 Intr + 178301 178384   84  0  0  104   99    91 0.977  11.59
 5.15 Intr + 183166 183202   37  2  1  113  109    92 0.998  11.12
 5.16 Intr + 185189 185291  103  2  1   88   80   200 0.991  19.38
 5.17 Intr + 189765 189850   86  2  2   76  110    73 0.857   6.92
 5.18 Term + 191633 191783  151  2  1  101   38    64 0.565   0.08
 5.19 PlyA + 195734 195739    6                               1.05

 6.02 PlyA - 197082 197077    6                               1.05
 6.01 Sngl - 202431 202006  426  0  0   81   37   296 0.963  18.10

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  89218  89061  158  2  2  103   37    69 0.848   1.40


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:31376446_31584427|GENSCAN_predicted_peptide_1|107_aa
MKLLLLLLTVTLLLAQVTPGLPAMKLLYLFLAILLAIEEPVISGKRHILRCMGNSGICRA
SCKKNEQPYLYCRNCQSCCLQSYMRISISGKEENTDWSYEKQWPRLP

>gi568815578f:31376446_31584427|GENSCAN_predicted_CDS_1|324_bp
atgaagctccttcttctgcttttgactgttactctgctcctggcccaggtcaccccaggt
ctgccagccatgaaacttctttacctgtttcttgccatccttctggccatagaagaacca
gtgatatcaggcaaacgccacatccttcgatgcatgggtaacagtggaatttgtagggcc
tcttgcaaaaagaacgaacagccctacctctattgcagaaattgtcagtcctgctgcctc
cagtcctacatgaggataagcatttctggcaaagaggaaaataccgactggtcttatgag
aagcagtggccaagactaccttga

>gi568815578f:31376446_31584427|GENSCAN_predicted_peptide_2|103_aa
MGLECRKPELSKQQKTIVGKAVEKMEPLHTLGGNVKWCGHYGKREFAQDLMVFESVWQFP
LVPSLSPAAVEDVPCFLFIFCPDYKFPEASPAMQNYVYGATRF

>gi568815578f:31376446_31584427|GENSCAN_predicted_CDS_2|312_bp
atgggcttagaatgcagaaagccagaattatccaaacaacaaaagacaattgtgggcaag
gctgtggagaaaatggaacccttgcacacgctgggtgggaatgtaaaatggtgtggccac
tatggaaaacgtgagttcgcacaagatctgatggtttttgaaagtgtttggcagttcccc
ctggtgccctctctctcacctgctgccgtggaagatgtgccttgcttcctcttcatcttc
tgccctgattataagtttcctgaggcctccccagccatgcagaactatgtttatggtgcc
actagattctga

>gi568815578f:31376446_31584427|GENSCAN_predicted_peptide_3|242_aa
MTHNQEKNKSTNTEMTMMMKLADKDDKTAMINMLQVVKKVEEAMSMMRRNKDVKNIHGRA
RWVKPMIPALWEAKEVEGKYSAHNFWGSWKFKSSSRSSSSGPESPARTHASFCQPDGGPT
NKLGTKAFRVSPASSLLVDLNTQEVEIINVRKATPTCSLELGRKRRDGAAERAALDVVVV
IYQLAPAAAPNCLNPVTSRRRHKHRLRKVREDGRVLKNKYKATGSSFRFLRDLRTNHSES
FF

>gi568815578f:31376446_31584427|GENSCAN_predicted_CDS_3|729_bp
atgacccataaccaggagaaaaacaaatcaaccaacacagaaatgacaatgatgatgaaa
ctagcagacaaggatgataaaacagctatgataaatatgctccaagtagtaaaaaaggtg
gaggaagccatgagcatgatgagaagaaataaagatgtaaaaaatattcatggccgggca
cgatgggtcaagcctatgatcccagcactttgggaggccaaggaagtagaggggaaatac
tctgcccataatttctggggaagctggaagtttaaatccagctcccgcagcagcagcagt
gggcctgagagccctgctagaacccatgcctcattctgccagcctgatggtggacccacc
aacaagctagggacaaaggcctttcgtgtgtctcctgctagcagtctactggttgacctg
aacactcaggaagtagagataattaatgtgagaaaggccacccccacatgctccctggag
ctgggcaggaagaggagggatggagccgctgagagagcagctctggatgttgtagttgtc
atctatcagctggcacctgctgctgctccaaactgcctgaacccagtgaccagcaggagg
cgccacaaacaccggctccggaaggtcagggaagacggcagagttttgaagaataaatac
aaagcaacagggtcatccttccgcttcctcagagatctgagaaccaaccactcagaatcc
ttcttctga

>gi568815578f:31376446_31584427|GENSCAN_predicted_peptide_4|298_aa
MTLNTEQEAKTPLHRRASTPLPLSPRGHQPGRLSTVPSTQSQHPRLGQSASLNPPTQKPS
PAPDDWSSESSDSEGSWEALYRVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERT
LTVDGEDTTLVVVDTWEAEKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLR
RTHQADHVPIILVGNKADLARCREVSVEEGRACAVVFDCKFIETSATLQHNVAELFEGVV
RQLRLRRRDSAAKEPPAPRRPASLAQRARRFLARLTARSARRRALKARSKSCHNLAVL

>gi568815578f:31376446_31584427|GENSCAN_predicted_CDS_4|897_bp
atgacactcaacaccgagcaggaagcaaagacccctctgcaccggcgagccagcacccca
ctgcccctgtccccacggggccaccagcctggccgcctgagcacagtgccttccactcaa
tcccagcatccccggctgggccaatcagcctccctcaaccctcccacccagaaaccttca
cctgccccagatgattggtcttctgaatccagcgactctgaaggctcctgggaggctctc
taccgtgtggtgctacttggagatcctggagtggggaagaccagcttggccagcctcttt
gcagggaagcaagagagggacctccatgaacagctgggagaagatgtatatgagaggacc
ctcacggtggatggagaagacaccacactggtggtcgtggacacctgggaggccgagaaa
ctggataaaagctggagccaggagtcatgcctgcaggggggcagtgcctatgtcatcgta
tactccatcgcagaccgaggcagctttgagagtgcctctgagctccgcatccagctgcgg
cgcacacatcaggcagaccatgtgcccatcatcctcgtgggcaacaaggcagacttggcc
cgctgccgagaagtctctgtggaagagggccgcgcctgcgctgtggtgttcgactgtaaa
ttcatcgagacatccgccacgctgcagcacaatgtggccgagctcttcgagggcgtggtg
cgccaactgcgcttgcgccgccgggacagtgcggccaaggaacccccagcaccccgacgg
ccggccagcctagcccagcgcgctcgtcgcttcctggcacgcctgacagcccgcagcgca
cgccgccgggcactcaaggcccgctccaagtcctgccacaatctggccgtgctctga

>gi568815578f:31376446_31584427|GENSCAN_predicted_peptide_5|739_aa
MNLGINHSWNGDAGKLDSLGMRTADSGRVRWPGRRIDPILRDLRQGWLRSESHQPHQMHP
DLYDISAVPLPGKSPLATHNAHNSTIMDTTKALVQYTKQAWFSVKENEDKADKNRKEMQR
EDPGSMDILASRDYNLNKVSRALASFLDHEGNVAFPAEPVSPPASLLQQPELESDPERTL
AMDSALSDPHNGSAEAGGPTNSTTRPPSTPEGIALAYGSLLLMALLPIFFGALRSVRCAR
GKNASDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSH
TIRGEGHQDVACQWEAMTFTFDMSHQGPGRISACYKSLHSESFSKHFSRCLAGTSPFMNK
FFPASFPNRQYQLLFTQGSGENKEGDSTGALPIPFVSLLSPASPWIMFKKFDEKESVSNC
IQLKTSVIKGIKSQLVEQFPGIEPWLNQIMPKKDPVKIVRCHEHTEILTGLTGGRGSPAS
GSGLTWPLCSEIINYEFDTKDLVCLGLSSIVGVWYLLRKHWIANNLFGLAFSLNGVELLH
LNNVSTGCILLGGLFIYDVFWVFGTNVMVTVAKSFEAPIKCDKTKAVVFPQDLLEKGLEA
NNFAMLGLGDVVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHA
QPALLYLVPACIGFPVLVALAKGEVTEMFSYESSAEILPHTPRLTHFPTVSGSPASLADS
MQQKLAGPRRRRPQNPSAM

>gi568815578f:31376446_31584427|GENSCAN_predicted_CDS_5|2220_bp
atgaatctgggcatcaaccactcctggaatggagatgctggcaaactcgactctctgggg
atgcgcacagctgactcagggagggtgcggtggccaggaagaaggatcgatcctattctc
agagatcttcgccagggctggttaagatctgagagccatcagccacatcaaatgcatcct
gatctctatgacatcagtgcggtccctctgcctggtaaatctcctcttgctactcacaat
gcccataattccaccattatggatacaaccaaggctcttgttcagtatacaaagcaagcc
tggttttctgtgaaagagaatgaagacaaagcagataaaaacagaaaggagatgcagaga
gaggatcctggcagcatggacatcctggcttccagggactacaatttgaacaaggtgtcc
agagctttagcatccttcttagatcatgaggggaacgtggctttccctgcagagccggtg
tctccgcctgcgtccctgctgcagcaaccggagctggagtcggatcccgaacgcaccctc
gccatggactcggccctcagcgatccgcataacggcagtgccgaggcaggcggccccacc
aacagcactacgcggccgccttccacgcccgagggcatcgcgctggcctacggcagcctc
ctgctcatggcgctgctgcccatcttcttcggcgccctgcgctccgtacgctgcgcccgc
ggcaagaatgcttcagacatgcctgaaacaatcaccagccgggatgccgcccgcttcccc
atcatcgccagctgcacactcttggggctctacctctttttcaaaatattctcccaggag
tacatcaacctcctgctgtccatgtatttcttcgtgctgggaatcctggccctgtcccac
accatcaggggagaagggcaccaggatgtggcttgtcagtgggaagcaatgacctttacg
tttgacatgagccatcaagggccaggaagaatctctgcctgctacaaaagtctgcattca
gagtcattcagcaagcattttagcagatgtctagcaggcaccagccccttcatgaataag
ttttttccagccagctttccaaatcgacagtaccagctgctcttcacacagggttctggg
gaaaacaaggaaggggactccaccggagccttgccaattccgtttgtttccctgttgtcg
cccgcttcaccctggatcatgttcaagaagtttgatgaaaaggaaagtgtgtccaactgc
atccagttgaaaacgtcagttattaagggcattaagagccaactggtagagcaatttcca
ggtattgaaccatggcttaatcaaatcatgcctaagaaagatcctgtcaaaatagtccga
tgccacgaacatacagaaatccttaccgggctgacaggtgggaggggtagccctgcctca
gggagtggacttacctggcctctctgctcagagatcatcaattatgaatttgacaccaag
gacctggtgtgcctgggcctgagcagcatcgttggcgtctggtacctgctgaggaagcac
tggattgccaacaacctttttggcctggccttctcccttaatggagtagagctcctgcac
ctcaacaatgtcagcactggctgcatcctgctgggcggactcttcatctacgatgtcttc
tgggtatttggcaccaatgtgatggtgacagtggccaagtccttcgaggcaccaataaaa
tgtgacaaaactaaggcagtggtgtttccccaggatctgctggagaaaggcctcgaagca
aacaactttgccatgctgggacttggagatgtcgtcattccagggatcttcattgccttg
ctgctgcgctttgacatcagcttgaagaagaatacccacacctacttctacaccagcttt
gcagcctacatcttcggcctgggccttaccatcttcatcatgcacatcttcaagcatgct
cagcctgccctcctatacctggtccccgcctgcatcggttttcctgtcctggtggcgctg
gccaagggagaagtgacagagatgttcagctacgagtcctcggcggaaatcctgcctcat
accccgaggctcacccacttccccacagtctcgggctccccagccagcctggccgactcc
atgcagcagaagctagctggccctcgccgccggcgcccgcagaatcccagcgccatgtaa

>gi568815578f:31376446_31584427|GENSCAN_predicted_peptide_6|141_aa
MGLAGPALGAAGRPAAPGSEGLSTRASSCRGCTGSPSSAGPPALRWISCRALAASPWDTA
GDLQPAMPPRPMGSCAAQASPTSAAPSSMAPGPIDPPRAEECGRHTAWDWQAAPPAAPVR
DPQGEASRAPESSGDLENLYV

>gi568815578f:31376446_31584427|GENSCAN_predicted_CDS_6|426_bp
atgggcttggcgggccccgcacttggagcggctggccggcccgccgccccaggcagtgag
gggcttagcacccgggccagcagctgcagagggtgcaccgggtccccaagcagtgctggc
ccaccggcgctgcgctggatttcttgccgggccttagctgcctccccgtgggacacggct
ggggacctgcagcccgccatgcccccccgccccatgggctcctgtgcagcccaagcctcc
cctacgagcgccgccccctcctccatggcgcccggtcccatcgaccccccaagggctgag
gagtgcggtcggcacacggcctgggattggcaggcagctccacctgcagcccctgtgcgg
gatccacagggtgaagccagccgggctcctgagtctagtggggacttggagaacctttat
gtctag