GENSCAN 1.0	Date run:  4-Nov-116	Time: 20:21:28

Sequence gi568815587r:73577901_73860635 : 282735 bp : 43.73% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -   1052   1047    6                               1.05
 1.05 Term -   2482   2320  163  0  1  113   48    71 0.065   3.01
 1.04 Intr -  17753  17732   22  0  1   65   81    33 0.057  -3.10
 1.03 Intr -  20235  20023  213  1  0  122   93   121 0.868  14.69
 1.02 Intr -  21060  20935  126  1  0   47   85    73 0.492   3.55
 1.01 Init -  40925  40832   94  2  1   77   97    97 0.805  10.04
 1.00 Prom -  65718  65679   40                              -2.66

 2.00 Prom +  66472  66511   40                              -6.46
 2.01 Init +  69730  69838  109  0  1   67   98   153 0.947  12.58
 2.02 Intr +  72653  72805  153  0  0   25   89   256 0.518  19.44
 2.03 Intr +  73888  73990  103  2  1   82   76   145 0.989  11.93
 2.04 Intr +  75075  75114   40  0  1   79  117    12 0.698   1.43
 2.05 Intr +  82853  82952  100  1  1   59  111   239 0.871  22.98
 2.06 Term +  83566  83702  137  2  2  114   52   139 0.994  11.08
 2.07 PlyA +  84891  84896    6                               1.05

 3.15 PlyA -  85976  85971    6                               1.05
 3.14 Term - 101820 101753   68  1  2  133   35    72 0.112   4.50
 3.13 Intr - 127846 127822   25  1  1   75   86     5 0.037  -3.40
 3.12 Intr - 129613 129520   94  0  1   73  111    53 0.544   6.07
 3.11 Intr - 133369 133259  111  0  0   25   34   139 0.279   1.69
 3.10 Intr - 138462 138351  112  1  1   89   64    70 0.890   4.14
 3.09 Intr - 140990 140885  106  2  1   90   58    99 0.952   6.89
 3.08 Intr - 142999 142946   54  1  0  126   79    44 0.907   6.48
 3.07 Intr - 163621 163554   68  2  2  101   95    33 0.051   3.92
 3.06 Intr - 182285 182148  138  0  0   95   81    42 0.625   4.64
 3.05 Intr - 182742 182666   77  2  2   34  101    90 0.633   4.06
 3.04 Intr - 182936 182785  152  2  2   53   18   124 0.566   0.86
 3.03 Intr - 183565 183433  133  0  1  152   92    50 0.731  12.45
 3.02 Intr - 219428 219183  246  1  0   67   81   135 0.697   7.27
 3.01 Init - 219744 219671   74  0  2   87   55   103 0.672   5.50
 3.00 Prom - 224159 224120   40                              -5.06

 4.00 Prom + 229645 229684   40                              -4.46
 4.01 Init + 230600 230603    4  1  1   89   72     0 0.080  -1.34
 4.02 Intr + 247808 247896   89  0  2  105   82    76 0.661   8.39
 4.03 Intr + 266907 267076  170  2  2  116   86   109 0.985  12.24
 4.04 Intr + 282007 282109  103  1  1   99   96    69 0.452   8.98

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 201595 201738  144  0  0  101   77    91 0.860   7.68
S.002 Term - 218497 218263  235  0  1   40   36   120 0.833  -2.21


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:73577901_73860635|GENSCAN_predicted_peptide_1|205_aa
MKTQEYLEHQCGLKASRFETQEKLKFQPVSKGKFLKVMELGQEEDMPFVVWIQVAESSSN
LQGDQRGSSGISSAERPLPPPVGLLGGYCRGFRAESLRRRLRSPRAIRHPTGHGRERRRR
SLRRRQGHRRLSRRRRRFRLQLLTGQNDDNGRGFFGLGSIFGGAGLADNLVDLLCGSSFT
LALSPLASPSAFLGHGGGDSDGSGT

>gi568815587r:73577901_73860635|GENSCAN_predicted_CDS_1|618_bp
atgaagacccaggagtacctggagcaccaatgtggcctgaaagccagcaggtttgagact
caagaaaagctgaagtttcagcctgtctccaaaggtaaattcttaaaagtaatggagctg
ggtcaagaagaggatatgccctttgtcgtttggattcaagttgccgaatcgtcctcaaat
ttgcagggagaccagcgaggaagctccggcattagttctgccgagcgtcccctcccccca
cccgtcgggctcctcggcggctactgcagaggattcagagccgagtcgctgaggaggagg
ctccggtccccgcgcgccatccgccaccctactggacacgggcgagagcgtcgccgccgt
agcctccggagaagacaagggcatcgccgcctcagccgccgccgccgccgttttcgcctg
cagctgctcaccgggcagaacgatgataatggaaggggcttttttggcctgggctctatc
tttggaggagcaggtttagcagacaaccttgtggatcttctctgtggttcatccttcacc
ttggctttatctcctttagcatccccttcagcctttcttgggcatggtggcggcgacagt
gacggcagcgggacgtag

>gi568815587r:73577901_73860635|GENSCAN_predicted_peptide_2|213_aa
MPQALRGTQSAGAAGWVAAASSSGRLGSNIRNKCRQGSILRRWKRNWFALWLDGTLGYYH
DETAQDEEDRVLIHFNVRDIKIGPECHDVQPPEGRSRDGLLTVNLREGGRLHLCAETKDD
ALAWKTALLEANSTPVRVYSPYQDYYEVVPPNAHEATYVRSYYGPPYAGPGVTHVIVRED
PCYSAGAPLAMGMLAGAATGAALGSLMWSPCWF

>gi568815587r:73577901_73860635|GENSCAN_predicted_CDS_2|642_bp
atgccccaggctctccggggcacacaaagcgcaggcgcagcgggttgggtggcagcagca
tcgagtagcggccgcttaggcagcaacatccgcaacaagtgtagacaaggctccatcctc
cgccgctggaagcggaactggtttgccctgtggctggacgggaccctgggatactaccac
gatgagacagcgcaggacgaggaggaccgtgtgctcatccacttcaatgtccgtgacata
aagatcggcccagagtgccatgatgtgcagcccccagagggccggagccgagatggcctg
ctgactgtgaacctacgggaaggcggccgcctgcacctctgtgcggagaccaaggatgat
gccctagcatggaagacagcactgctggaggcaaactccaccccggtgcgcgtctacagc
ccgtaccaagactactacgaggtggtgccccccaatgcacacgaggccacgtatgtccgc
agctactacggaccgccctacgcaggccctggcgtgacgcacgtgatagtgcgggaggat
ccctgctacagcgccggcgcccctctggccatgggcatgcttgcgggagccgccactggg
gcggcgctgggctcgctcatgtggtcgccctgctggttctga

>gi568815587r:73577901_73860635|GENSCAN_predicted_peptide_3|485_aa
MPAAAAGRAAAGAGTGTGSLRGRTRSQVLVLQPEQMEYADKRRVSKTKKSFIEWQNSSEE
DLGVGSSSLQAGRLNVFPALSREVSRVDSSSLQPVVPMSVQLWLSPRLRGATLLMAATVL
RFPQLEGCARSHAATSLACGLALSPFRLAHYATLPGGGGGCQSVESPAALQPGSSTGPCR
GRESSVPALPLAFFVSWLEQHRSTMSTGGDFGNPLRKFKLVFLGEQSVPQLCEAHSGKPH
SRERALFNLGQGGWDLGVVFPRGLALRSADVVEDFCVDMFSALLGKYQGAWSLDHMATIG
IDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKW
IDDVRTERGSDVIIMLVGNKTDLADKSWTAAVELSIKYFQEKLQQDLEAEHGRGRGYSPH
TTVLQVSIEEGERKAKELNVMFIETSAKAGYNVKQNLAMCMERTLSTCSSSFAGNGKHTG
QKQRR

>gi568815587r:73577901_73860635|GENSCAN_predicted_CDS_3|1458_bp
atgccggctgctgcagcagggcgggcagctgcaggtgctggcacaggcactggctctctg
cgaggccggaccaggtcccaagttcttgtcctgcaaccagaacaaatggagtatgcagac
aagcggagggtgagcaagacaaagaagagctttattgagtggcagaatagctcagaggag
gaccttggagtgggcagctcctctctgcaggcaggtcgtctgaatgtcttcccagctctc
agcagagaagtctctagagtggatagctcctctctgcagccggttgtcccgatgtctgtt
cagctctggctgagcccaaggctgagaggcgccacacttcttatggccgccacagtgctc
cgctttccacagctcgagggctgcgcgcgctctcacgctgccacctcactcgcgtgtggg
ctcgccctcagccccttccgattggctcattatgctactctgccgggaggcggcggcggc
tgccagtctgtggagagtcctgctgccctccagccgggctcctccaccgggccttgcagg
ggccgagagagctcggtgcccgcccttccgctcgcctttttcgtcagctggctggagcag
catcgttccacaatgtccacgggcggagacttcgggaatccgctgaggaaattcaagctg
gtgttcctgggggagcaaagcgttcctcagctctgtgaggcccactcagggaagccccac
tcccgagagcgggccctcttcaaccttggccaaggagggtgggatctgggcgttgttttc
cccagaggcttggccctgcgaagtgctgatgtcgtggaagatttttgtgtggacatgttt
tcagctcttttgggtaaataccaaggagcatggtcgctggatcatatggcaacaattggc
attgactttttatcaaaaactatgtacttggaggatcgaacaatcaggcttcagctgtgg
gatactgcgggtcaggaacgtttccgtagcctcattcccagttacatccgtgattctgct
gcagctgtagtagtttacgatatcacaaatgttaactcattccagcaaactacaaagtgg
attgatgatgtcagaacagaaagaggaagtgatgttatcatcatgctagtaggaaataaa
acagatcttgctgacaagagctggactgctgctgtggagctcagcatcaagtacttccag
gagaagcttcagcaggacctagaggcagagcatggtagaggtagaggatacagccctcat
accaccgtgctgcaagtgtcaattgaggagggagagaggaaagccaaagagctgaatgtt
atgtttattgaaactagtgcaaaagctggatacaatgtaaagcagaacctagcaatgtgt
atggaacgtactctttcgacgtgtagcagcagctttgccgggaatggaaagcacacagga
cagaagcagagaagatag

>gi568815587r:73577901_73860635|GENSCAN_predicted_peptide_4|122_aa
MGGILLSISRPYKTKPTHGIGKYKHLIKAEEPKKKKGKVEVRAINLGTDYEYGVLNIHLT
AYDMTLAESYAQYVHNLCNSLSIKVEESYAMPTKTIEVLQLQDQGSKMLLDSVLTTHERV
VQ

>gi568815587r:73577901_73860635|GENSCAN_predicted_CDS_4|366_bp
atgggtggaattctactaagtatcagtcggccctacaagacaaagcccacccacggcatt
ggaaagtacaagcacttaattaaagcagaagagcccaagaagaagaagggaaaagtggaa
gtgagagccattaatttggggacagattatgaatatggggttttaaatattcatctgact
gcatatgatatgaccctggcagagagttatgcccagtatgttcacaacctctgcaactct
ctctccattaaagtcgaggaaagttatgcaatgccaaccaaaaccatagaagtgttgcag
ttgcaggaccaaggcagcaaaatgctcctggactcagtgcttaccacccatgagcgagtg
gttcag