GENSCAN 1.0	Date run:  4-Nov-116	Time: 21:17:04

Sequence gi568815592f:36496763_36701794 : 205032 bp : 45.47% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.17 PlyA -    171    166    6                               1.05
 1.16 Term -   1113   1061   53  1  2   98   42    41 0.116  -1.91
 1.15 Intr -   3228   3111  118  0  1   87  123   107 0.893  14.14
 1.14 Intr -   4538   4485   54  2  0   91   80    22 0.554   0.88
 1.13 Intr -   9882   9821   62  1  2   88   94    29 0.633   1.95
 1.12 Intr -  10840  10738  103  1  1  110   89   -23 0.230  -0.25
 1.11 Intr -  12301  12182  120  1  0   97   50    45 0.304   2.29
 1.10 Intr -  18730  18576  155  2  2   89   67    99 0.122   7.69
 1.09 Intr -  21078  20955  124  0  1   40   76    31 0.420  -2.74
 1.08 Intr -  25055  24972   84  2  0   79  103    30 0.595   3.62
 1.07 Intr -  27701  27579  123  2  0   48   83    68 0.838   3.08
 1.06 Intr -  28880  28829   52  1  1   99   76    79 0.974   6.71
 1.05 Intr -  43445  43310  136  0  1  117   88    39 0.849   6.43
 1.04 Intr -  49955  49862   94  2  1   34   99    55 0.628   0.74
 1.03 Intr -  50621  50428  194  0  2   96  105    47 0.741   6.41
 1.02 Intr -  52643  52532  112  2  1  -61   -7   276 0.298   3.15
 1.01 Init -  61461  61447   15  0  0   75   99    16 0.220   1.45
 1.00 Prom -  78083  78044   40                              -4.56

 2.00 Prom +  97566  97605   40                              -2.66
 2.01 Init + 100001 100206  206  1  2   62   55   168 0.947   9.22
 2.02 Intr + 102087 102221  135  0  0   94   80    61 0.946   5.58
 2.03 Intr + 103241 103461  221  2  2   55   23   138 0.888   1.95
 2.04 Intr + 104390 104428   39  0  0  127   99    12 0.889   4.40
 2.05 Intr + 116966 117081  116  0  2   66   61   133 0.661   8.57
 2.06 Intr + 121695 121893  199  2  1   55   45    64 0.320  -2.28
 2.07 Term + 125549 125754  206  0  2   37   47   215 0.718   9.83
 2.08 PlyA + 125845 125850    6                               1.05

 3.00 Prom + 128831 128870   40                              -5.16
 3.01 Init + 142845 142902   58  2  1   59  111    32 0.298   4.11
 3.02 Intr + 146736 146850  115  1  1  119   28    47 0.025   1.31
 3.03 Intr + 168099 168205  107  0  2  112   94    37 0.338   6.56
 3.04 Term + 177053 177561  509  0  2   47   45   400 0.003  26.17
 3.05 PlyA + 177636 177641    6                              -5.80

 4.00 Prom + 177879 177918   40                             -13.24
 4.01 Init + 177961 178399  439  0  1   88   64   253 0.511  19.18
 4.02 Intr + 179763 179808   46  1  1   82   97    -6 0.215  -2.83
 4.03 Intr + 181063 181171  109  1  1   28  109    46 0.459   0.99
 4.04 Intr + 181929 182198  270  2  0   14   70   131 0.200   1.64
 4.05 Intr + 185905 185968   64  0  1   43   96    64 0.574   0.99
 4.06 Intr + 187335 187883  549  1  0   90   75   471 0.463  38.84
 4.07 Term + 188989 189038   50  2  2  115   36    81 0.977   3.07
 4.08 PlyA + 190547 190552    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 177055 177561  507  0  0  105   45   391 0.991  32.54


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:36496763_36701794|GENSCAN_predicted_peptide_1|532_aa
MQKKLKKEKEKEKEKKKKKKKKKKKKKKKKRKKKKKKRLAGHVGTLPVVLTRNRLLPPVS
ESLTRPLPSLARWLPPPGLRQPSSRDYWPKGRLRLSAVPSPASPWALDTGLQISFKSQEK
AGKILKKRVEKQQPEEKVAAMAMTGSTPCSSMSNHTKERVTMTKVTLENFYSNLIAQHEE
REMRQKKLEKVMEEEGLKDEEKRLRRSAHARKETEFLRLKRTRLGLEDFESLKVIGRGAF
GEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL
NLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLL
DSKATRRREERRPFQEPRLRGFLSQCCDTPFRALRFLASPSFQGHVKLSDFGLCTGLKKA
HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLSWYVRVEYWNAENVSLGQAFST
VGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGSAVNGNIELELLELRK

>gi568815592f:36496763_36701794|GENSCAN_predicted_CDS_1|1599_bp
atgcagaagaaactgaagaaggagaaggagaaggagaaggagaagaagaagaagaagaag
aagaagaagaagaagaagaagaagaagaagaggaagaagaagaagaagaaaagattagct
gggcatgttggaacgcttcctgttgtcctcacccgtaaccgcctgttgccccctgtctca
gagtccctcacgcgtcccctcccgtctttggctcgttggctgccgccgccggggcttcgc
cagccttcaagtcgagactactggccgaaggggcgtctgcggctctccgccgtccccagc
cctgcctctccctgggctctggatactgggcttcagataagcttcaaatcacaggaaaag
gcagggaaaattcttaagaagagagtggaaaagcaacagccagaggaaaaagtcgcagcc
atggcaatgacaggctcaacaccttgctcatccatgagtaaccacacaaaggaaagggtg
acaatgaccaaagtgacactggagaatttttatagcaaccttatcgctcaacatgaagaa
cgagaaatgagacaaaagaagttagaaaaggtgatggaagaagaaggcctaaaagatgag
gagaaacgactccggagatcagcacatgctcggaaggaaacagagtttcttcgtttgaag
agaacaagacttggattggaagattttgagtccttaaaagtaataggcagaggagcattt
ggtgaggtacggcttgttcagaagaaagatacgggacatgtgtatgcaatgaaaatactc
cgtaaagcagatatgcttgaaaaagagcaggttggccacattcgtgcggagcgtgacatt
ctagtggaggcagacagtttgtgggttgtgaaaatgttctatagttttcaggataagcta
aacctctacctaatcatggagttcctgcctggaggggacatgatgaccttgttgatgaaa
aaagacactctgacagaagaggagactcagttttatatagcagaaacagtattagccata
gactctattcaccaacttggattcatccacagagacatcaaaccagacaaccttcttttg
gacagcaaggcaacaagaaggagagaagagcggcggcccttccaggagcccagacttagg
ggcttcctgagccagtgctgtgacaccccctttagggctctgcggtttctggcatctcca
agcttccagggccatgtgaaactttctgactttggtctttgcacaggactgaaaaaagca
cataggacagaattttataggaatctgaaccacagcctccccagtgatttcactttccag
aacatgaattccaaaaggaaagcagaaacctggaaaagaaatagacgtcagctatcctgg
tatgttagagtagaatactggaatgcagaaaatgtttctcttggtcaggccttctccaca
gtaggcactcctgactacattgctcctgaggtgttcatgcagaccgggtacaacaagctc
tgtgattggtggtcgcttggggtgatcatgtatgagatgctcatcggttctgctgtgaat
gggaacatagaattggagctcctggagttgaggaaataa

>gi568815592f:36496763_36701794|GENSCAN_predicted_peptide_2|373_aa
MHRDSCPLDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAA
DAVRELDGRTLCGCRVRVELSNGEKRSRNRGPPPSWGRRPRDDYRRRSPPPRRSLLSNLN
QIGSSHLDRPHIPGQSAQLFIYQMSSQQLQQQPSANKKAGKIHNTPFANQLNPTQHLAKP
FQQILPGHLQEGEASLAAGAEIATATPAFSDHNPDQSAAINTEGRPSTSKVMWLKAYMIN
PEQVPQEQVRGVSPVGKAFLRGSEAVSQERGEAPLSQSCSAHLAAAATHLYAPSWYITIT
TGSHDRNTEVGSSHKEVASSIIKKLIPAHVDGFEEFKTLVEEVMKDVVEIARELKLESGD
VTGSTFSSLAIPT

>gi568815592f:36496763_36701794|GENSCAN_predicted_CDS_2|1122_bp
atgcatcgtgattcctgtccattggactgtaaggtttatgtaggcaatcttggaaacaat
ggcaacaagacggaattggaacgggcttttggctactatggaccactccgaagtgtgtgg
gttgctagaaacccacccggctttgcttttgttgaatttgaagatccccgagatgcagct
gatgcagtccgagagctagatggaagaacactatgtggctgccgtgtaagagtggaactg
tcgaatggtgaaaaaagaagtagaaatcgtggcccacctccctcttggggtcgtcgccct
cgagatgattatcgtaggaggagtcctccacctcgtcgcagccttctctccaaccttaac
caaatcggcagcagccacctcgaccgcccacacattcctggccaatcagctcagctgttt
atttaccaaatgtcttcacaacaactacagcagcagccttcggctaacaaaaaagcagga
aaaatccacaacacccccttcgccaaccaactaaatccaacgcaacatctggcaaaacct
tttcagcaaattcttcctggccatctccaagaaggagaagcttctctcgcagccggagca
gaaattgccacagccactccagccttcagcgaccacaatcctgatcagtcagcagccatc
aacactgagggaagaccctccaccagcaaggttatgtggctgaaggcttatatgattaat
ccagagcaggtcccccaggagcaggttcgtggcgtatcaccagtggggaaggcttttctc
agaggctctgaggcagtgtctcaagaaaggggggaggctccgctttctcagagttgcagt
gctcaccttgctgctgctgccacacatctgtatgcgccttcctggtacatcaccatcacc
acaggctctcatgatagaaacacagaagttggttccagccacaaggaagtggcttcatcc
atcatcaagaagttgattccagcccacgtggatggctttgaggagttcaagactttagtg
gaggaagtgatgaaagatgtggtggaaatagcaagagaactaaaactggagtctggagat
gtgacaggctccactttcagttctcttgctattcccacatga

>gi568815592f:36496763_36701794|GENSCAN_predicted_peptide_3|262_aa
MDKPRPGKTTFVIIVSPLPGLTTLGNPCWQTCFQAGNLDISRISGIPGGLTIQKLGQVSG
YSGPSSFRTVAPQVSHLPPRDRYFPDLYSATHTDMTKGLVLGIYSKEKEDDVPQFTSAGE
NLDKLIAGKLRETLNISGPPLKAGKTRNFYGLHQDFPSVVLVGLGKKAARIDEQENWQEG
KENIRAAVAAGCRQIQDLELSSVEVDPCRDAQAAEEGAVLGLYEYDDLKQKKKMAMSVKL
YGTGDQEAWQKGVLFASGQNLA

>gi568815592f:36496763_36701794|GENSCAN_predicted_CDS_3|789_bp
atggataagcctcgccctgggaaaaccaccttcgtgatcatagtatctcccctgccaggg
ctgacaacacttggaaacccatgctggcaaacctgcttccaagcagggaacttggacata
agtagaatatcaggaattcctggaggacttacaatccagaaactgggacaggtctcgggt
tattctggtccttcaagttttagaactgtggccccccaggtgtcacatctgccccccaga
gaccgctacttccctgatctttattcagccacacacacagacatgacgaagggccttgtt
ttaggaatctattccaaagaaaaagaagatgatgtgccacagttcacaagtgcaggagag
aatcttgataaattgatagctggaaagctgagagagactttgaacatatctggaccacct
ctgaaggcaggcaagactcgaaacttttatggtctgcatcaggacttccccagcgtggtg
ctagttggcctcggcaaaaaggcagccagaatcgacgaacaggaaaactggcaggaaggc
aaagaaaacatcagagctgctgttgcagcaggatgcaggcagattcaagacctggagctc
tcttccgtggaggtggatccctgtagagatgctcaggctgctgaggagggcgcggtgctt
ggtctctatgaatacgatgacctaaagcaaaaaaagaagatggctatgtcggtgaagctc
tatggaactggggatcaggaggcctggcagaaaggagtcctgtttgcttctgggcagaac
ttggcatga

>gi568815592f:36496763_36701794|GENSCAN_predicted_peptide_4|508_aa
MPSGKANKLGDVVRARNRKTIQVGNTDAEGRLILADALCYVHTFNPKVILNATTLTGVID
VALGSGATGVFTNSSWLWNKLFEASIETGDRVWRMPLFKHCTRQVVDCQLADVNNIGKYR
SAGACTSAAFLKEFVTHPKWAHLDIAGEEGDGRRQETSKDPSVYGLCGEYSGDRQLTRQI
LPFLANKAAATTGISSVQGRAELRQLRCEQLPKSVPCGAGAGRGFAEAPRHSEEVRERRQ
TTGDPGPAAQSRAKRARVCPCVSARMRVRGCVLRSQVFLRQVNDGRGSENPVAAKVVQSL
SPGVKPEQAGAMSEPAGDVRQNPCGSKACRRLFGPVDSEQLSRDCDALMAGCIQEARERW
NFDFVTETPLEGDFAWERVRGLGLPKLYLPTGPRRGRDELGGGRRPGTSPALLQGTAEED
HVDLSLSCTLVPRSGEQAEGSPGGPGDSQGRKRRQTSMTGADMCTEGLCKGPGFSESMVQ
GLTCLVLVQHAPDFYHSKRRLIFSKRKP

>gi568815592f:36496763_36701794|GENSCAN_predicted_CDS_4|1527_bp
atgcccagcggcaaggccaacaagctgggggatgttgttagagccaggaacaggaagacc
atccaggttggtaacactgatgctgaggggaggctcatactggctgatgcgctctgttac
gtgcacacatttaacccgaaggtcatcctcaatgccaccaccttaacaggtgtcatagat
gtagctttggggtcaggtgccactggggtctttaccaattcatcctggctctggaacaag
ctcttcgaggccagcattgaaacaggggaccgtgtctggaggatgcctctcttcaaacat
tgtacaagacaggttgtagattgccagctggctgatgttaacaacattggaaaatataga
tctgcgggagcatgtacatctgcggcattcctgaaagaattcgtgactcatcctaagtgg
gcacatttagacatagcaggtgaggaaggggatggtaggagacaggagacctctaaagac
cccagtgtatacgggctatgtggggagtattcaggagacagacaactcactcgtcaaatc
ctccccttcctggccaacaaagctgctgcaaccacagggatttcttctgttcagggccgc
gctgagctgcgccagctgaggtgtgagcagctgccgaagtcagttccttgtggagccgga
gctgggcgcggattcgccgaggcaccgaggcactcagaggaggtgagagagcggcggcag
acaacaggggaccccgggccggcggcccagagccgagccaagcgtgcccgcgtgtgtccc
tgcgtgtccgcgaggatgcgtgttcgcgggtgtgtgctgcgttcacaggtgtttctgcgg
caggtgaatgacgggcgtgggtcggaaaatccagttgctgccaaggtcgtgcagtcactc
agccctggagtcaagccagagcaggcaggcgccatgtcagaaccggctggggatgtccgt
cagaacccatgcggcagcaaggcctgccgccgcctcttcggcccagtggacagcgagcag
ctgagccgcgactgtgatgcgctaatggcgggctgcatccaggaggcccgtgagcgatgg
aacttcgactttgtcaccgagacaccactggagggtgacttcgcctgggagcgtgtgcgg
ggccttggcctgcccaagctctaccttcccacggggccccggcgaggccgggatgagttg
ggaggaggcaggcggcctggcacctcacctgctctgctgcaggggacagcagaggaagac
catgtggacctgtcactgtcttgtacccttgtgcctcgctcaggggagcaggctgaaggg
tccccaggtggacctggagactctcagggtcgaaaacggcggcagaccagcatgacaggt
gcggacatgtgcacggaaggactttgtaagggaccaggattctcagaatccatggtccaa
gggctgacctgtctggtcctggtccagcatgctccagatttctaccactccaaacgccgg
ctgatcttctccaagaggaagccctaa