GENSCAN 1.0	Date run:  5-Nov-116	Time: 20:35:24

Sequence gi568815587f:113875326_114089760 : 214435 bp : 46.74% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init -    335    120  216  2  0   66   60   217 0.105  13.39
 1.00 Prom -  20210  20171   40                              -4.46

 2.00 Prom +  26246  26285   40                              -6.46
 2.01 Init +  29624  29660   37  1  1   53  109    94 0.489   6.28
 2.02 Intr +  33970  34130  161  2  2   68   79   121 0.620   8.91
 2.03 Intr +  56433  56542  110  2  2   75   81    98 0.359   6.88
 2.04 Intr +  56964  57133  170  0  2   49   97    82 0.997   4.79
 2.05 Intr +  57611  57768  158  0  2   77   51   159 0.895  10.83
 2.06 Intr +  67657  67867  211  0  1   70   99   236 0.241  21.39
 2.07 Intr +  69248  69430  183  0  0   98   89   160 0.997  16.86
 2.08 Term +  70577  70812  236  0  2   70   49   194 0.999  10.18
 2.09 PlyA +  71018  71023    6                               1.05

 3.06 PlyA -  71504  71499    6                               1.05
 3.05 Term -  72308  72165  144  2  0   40   33    70 0.296  -5.39
 3.04 Intr -  72771  72725   47  1  2   79   80    33 0.379  -0.27
 3.03 Intr -  74080  73968  113  0  2   27  105   124 0.538   8.02
 3.02 Intr -  77291  77127  165  1  0   57   98    73 0.158   4.28
 3.01 Init -  89308  89172  137  1  2   73   -5   156 0.094   4.41
 3.00 Prom -  91530  91491   40                              -4.16

 4.00 Prom +  92205  92244   40                              -3.56
 4.01 Init + 100001 100067   67  1  1   56  121   186 0.988  17.93
 4.02 Intr + 102446 102597  152  0  2   80   65   145 0.967  11.28
 4.03 Intr + 103908 103952   45  2  0  105   99   101 0.997  11.51
 4.04 Intr + 105878 105987  110  1  2  112   62   195 0.999  18.38
 4.05 Intr + 107795 107964  170  2  2   84   81   282 0.963  26.69
 4.06 Intr + 110633 110850  218  0  2   99   73   147 0.529  12.52
 4.07 Intr + 111193 111403  211  0  1   91   87   359 0.656  34.59
 4.08 Intr + 111500 111721  222  0  0   62   94   159 0.941  12.00
 4.09 Term + 114140 114438  299  0  2   96   48   461 0.993  38.33
 4.10 PlyA + 114965 114970    6                               1.05

 5.13 PlyA - 115057 115052    6                               1.05
 5.12 Term - 119733 119702   32  1  2  109   50     7 0.131  -2.98
 5.11 Intr - 120745 120545  201  2  0   85   94    46 0.337   4.16
 5.10 Intr - 125570 125372  199  2  1   93   47   104 0.259   5.72
 5.09 Intr - 139735 139650   86  2  2  132   89     8 0.040   4.84
 5.08 Intr - 140132 140047   86  1  2   67   16    51 0.014  -4.74
 5.07 Intr - 146253 146152  102  2  0   15  119   121 0.839   7.19
 5.06 Intr - 147795 147659  137  0  2  109   94   -21 0.835  -0.03
 5.05 Intr - 149388 149321   68  1  2  100   90    58 0.887   5.82
 5.04 Intr - 152231 152103  129  0  0   76   97    20 0.197   2.37
 5.03 Intr - 154107 153967  141  1  0   51  107    29 0.117   1.42
 5.02 Intr - 162864 162729  136  0  1   77   87    63 0.645   5.24
 5.01 Init - 164864 164805   60  2  0   70   62    68 0.731   3.65
 5.00 Prom - 166705 166666   40                              -4.76

 6.00 Prom + 170526 170565   40                              -3.76
 6.01 Sngl + 187976 189247 1272  1  0   99   47  1598 0.474 152.52
 6.02 PlyA + 189359 189364    6                              -0.45

 7.00 Prom + 189866 189905   40                              -4.06
 7.01 Init + 195367 195424   58  0  1   89   77    60 0.293   6.47
 7.02 Term + 201326 201405   80  0  2   95   45    57 0.146   0.03
 7.03 PlyA + 204198 204203    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:113875326_114089760|GENSCAN_predicted_peptide_1|72_aa
MPGAGHVGQASGARCGRGRDGAGWRAGAGPSPERLGRRRLRRETGDPRLGASAMTAELQQ
DDAAGAADGHGS

>gi568815587f:113875326_114089760|GENSCAN_predicted_CDS_1|216_bp
atgccgggggcggggcatgtgggccaagcctccggcgcgcgctgcgggcgggggcgggac
ggagcggggtggagggcgggggcggggcctagtcctgagaggctgggccggcggcggctg
cggcgggagaccggtgacccgcggctgggcgcctcggccatgactgcggagctgcagcag
gacgacgcggccggcgcggcagacggccacggctcg

>gi568815587f:113875326_114089760|GENSCAN_predicted_peptide_2|421_aa
MAPLWACILVAAGILATDTHHPQDSALYHLSKQLLQKYHKEVRPVYNWTKATTVYLDLFV
HAILDVVWNDEFLSWNSSMFDEIREISLPLSAIWAPDIIINEFVDIERYPDLPYVYVNSS
GTIENYKPIQVVSACSLETYAFPFDVQNCSLTFKSILHTVEDVDLAFLRSPEDIQHDKKA
FLNDSEWELLSVSSTYSILQSSAGGFAQIQFNVVMRRHPLVYVVSLLIPSIFLMLVDLGS
FYLPPNCRARIVFKTSVLVGYTVFRVNMSNQVPRSVGSTPLIGHFFTICMAFLVLSLAKS
IVLVKFLHDEQRGGQEQPFLCLRGDTDADRPRVEPRAQRAVVTESSLYGEHLAQPGTLKE
VWSQLQSISNYLQTQDQTDQQEAEWLVLLSRFDRLLFQSYLFMLGIYTITLCSLWALWGG
V

>gi568815587f:113875326_114089760|GENSCAN_predicted_CDS_2|1266_bp
atggctcccctgtgggcctgcatcctggtggctgcaggaattctagccacagatacacat
catccccaggattctgctctgtatcatctcagcaagcagctattacagaaatatcataaa
gaagtgagacctgtttacaactggaccaaggccaccacagtctacctggacctgttcgtc
catgctatattggatgtggtctggaatgatgaatttttatcctggaactccagcatgttt
gatgagattagagagatctccctacctctaagtgccatctgggcccccgatatcatcatc
aatgagtttgtggacattgaaagataccctgaccttccctatgtttatgtgaactcatct
gggaccattgagaactataagcccatccaggtggtctctgcgtgcagtttagagacatat
gcttttccatttgatgtccagaattgcagcctgaccttcaagagcattctgcatacagtg
gaagacgtagacctggcctttctgaggagcccagaagacattcagcatgacaaaaaggcg
tttttgaatgacagtgagtgggaacttctatctgtgtcctccacatacagcatcctgcag
agcagcgctggaggatttgcacagattcagtttaatgtggtgatgcgcaggcaccccctg
gtctatgtcgtgagtctgctgattcctagcatctttctcatgctggtggacctggggagc
ttctacctgccacccaactgccgagccaggattgtgttcaagaccagtgtgctggtgggc
tacaccgtcttcagggtcaacatgtccaaccaggtgccacggagtgtagggagcacccct
ctgattgggcacttcttcaccatctgcatggccttcttggttctcagcttagctaagtcc
atcgtgttggtcaaattcctccatgatgagcagcgtggtggacaggagcagcccttcttg
tgccttcgaggggacaccgatgctgacaggcctagagtggaacccagggcccaacgtgct
gtggtaacagagtcctcgctgtatggagagcacctggcccagccaggaaccctgaaggaa
gtctggtcgcagcttcaatctatcagcaactacctccaaactcaggaccagacagaccaa
caggaggcagagtggctggtcctcctgtcccgctttgaccgactgctcttccaaagctac
cttttcatgctggggatctacaccatcactctgtgctccctctgggcactgtggggcggc
gtgtga

>gi568815587f:113875326_114089760|GENSCAN_predicted_peptide_3|201_aa
MREQRQAFSPIRSGNGGLTGSGAQQTTCWIQKDGSQRQVCNGGKQHLALFKEDEQGDQEL
AVHMQPGLPVTLRRDDLPARLTHTPGLQRPTQAVGEVQRVRRRKCTGDQFGGQASLLKGC
LLEADVKNLGNVICEWNKAAVEFHGQLALSTNWEKRKSGHRHEHAQRKGHVKTKQEVSNL
QAKDRAQKKATHPVCTLILGF

>gi568815587f:113875326_114089760|GENSCAN_predicted_CDS_3|606_bp
atgcgggaacaaaggcaagcctttagcccaatcaggagtggcaatgggggcctcactgga
tcaggagcacagcagacaacctgctggatccagaaggatggaagtcagcggcaggtctgc
aacggcggcaaacagcacctggcgctcttcaaagaggatgagcagggtgaccaggagctg
gctgtccacatgcagcccgggttaccagtgacactgaggagggatgaccttcccgctaga
cttacacacaccccaggccttcaaaggccaacacaggctgtgggagaggtacagagggta
agacgaaggaagtgtaccggggaccagtttggcggccaggcttcactcttaaagggctgc
ttgttagaggctgatgtaaagaacctgggcaatgtcatctgcgaatggaacaaagcagca
gtggaatttcatggacaattggcgctgagcactaactgggagaagagaaaatctggacac
agacatgagcatgcacagaggaaaggtcatgtgaaaacaaagcaagaagtcagcaacctg
caagccaaggacagggctcagaagaaagccacccaccctgtttgcaccttgatcttaggc
ttctag

>gi568815587f:113875326_114089760|GENSCAN_predicted_peptide_4|497_aa
MLLWVQQALLALLLPTLLAQGEARRSRNTTRPALLRLSDYLLTNYRKGVRPVRDWRKPTT
VSIDVIVYAILNVDEKNQVLTTYIWYRQYWTDEFLQWNPEDFDNITKLSIPTDSIWVPDI
LINEFVDVGKSPNIPYVYIRHQGEVQNYKPLQVVTACSLDIYNFPFDVQNCSLTFTSWLH
TRSSRLWVLDSKAGLLYSLSVQDINISLWRLPEKVKSDRSVFMNQGEWELLGVLPYFREF
SMESSNYYAEMKFYVVIRRRPLFYVVSLLLPSIFLMVMDIVGFYLPPNSGERVSFKITLL
LGYSVFLIIVSDTLPATAIGTPLIGVYFVVCMALLVISLAETIFIVRLVHKQDLQQPVPA
WLRHLVLERIAWLLCLREQSTSQRPPATSQATKTDDCSAMGNHCSHMGGPQDFEKSPRDR
CSPPPPPREASLAVCGLLQELSSIRQFLEKRDEIREVARDWLRVGSVLDKLLFHIYLLAV
LAYSITLVMLWSIWQYA

>gi568815587f:113875326_114089760|GENSCAN_predicted_CDS_4|1494_bp
atgctgctgtgggtccagcaggcgctgctcgccttgctcctccccacactcctggcacag
ggagaagccaggaggagccgaaacaccaccaggcccgctctgctgaggctgtcggattac
cttttgaccaactacaggaagggtgtgcgccccgtgagggactggaggaagccaaccacc
gtatccattgacgtcattgtctatgccatcctcaacgtggatgagaagaatcaggtgctg
accacctacatctggtaccggcagtactggactgatgagtttctccagtggaaccctgag
gactttgacaacatcaccaagttgtccatccccacggacagcatctgggtcccggacatt
ctcatcaatgagttcgtggatgtggggaagtctccaaatatcccgtacgtgtatattcgg
catcaaggcgaagttcagaactacaagccccttcaggtggtgactgcctgtagcctcgac
atctacaacttccccttcgatgtccagaactgctcgctgaccttcaccagttggctgcac
accaggtccagcaggctctgggtactagattccaaagctggcttgctttattctctctca
gtccaggacatcaacatctctttgtggcgcttgccagaaaaggtgaaatccgacaggagt
gtcttcatgaaccagggagagtgggagttgctgggggtgctgccctactttcgggagttc
agcatggaaagcagtaactactatgcagaaatgaagttctatgtggtcatccgccggcgg
cccctcttctatgtggtcagcctgctactgcccagcatcttcctcatggtcatggacatc
gtgggcttctacctgccccccaacagtggcgagagggtctctttcaagattacactcctc
ctgggctactcggtcttcctgatcatcgtttctgacacgctgccggccactgccatcggc
actcctctcattggtgtctactttgtggtgtgcatggctctgctggtgataagtttggcc
gagaccatcttcattgtgcggctggtgcacaagcaagacctgcagcagcccgtgcctgct
tggctgcgtcacctggttctggagagaatcgcctggctactttgcctgagggagcagtca
acttcccagaggcccccagccacctcccaagccaccaagactgatgactgctcagccatg
ggaaaccactgcagccacatgggaggaccccaggacttcgagaagagcccgagggacaga
tgtagccctcccccaccacctcgggaggcctcgctggcggtgtgtgggctgctgcaggag
ctgtcctccatccggcaattcctggaaaagcgggatgagatccgagaggtggcccgagac
tggctgcgcgtgggctccgtgctggacaagctgctattccacatttacctgctagcggtg
ctggcctacagcatcaccctggttatgctctggtccatctggcagtacgcttga

>gi568815587f:113875326_114089760|GENSCAN_predicted_peptide_5|458_aa
MGLHQNGIYQPLDLGLLNLQGQGKTQNHIHKGPKFGQQVKFQTAPQLSHSGVWTQNVCPA
SAPGIGVESSTGVPDAKLDGELFPLEGPHPALTLNFPFSAPDGGRRNTYTLPGCCGTWNA
NFSPGSARSAGEMMQEACSWTSWLVQVTCSSIRSQVIQQPLGFLDDQQQPLSGSVRGKEI
WGSAAHPCACGYPPLSSSLSHKSLKIPQGHAHAPQSFSYQCISRSGVDNRHFSKFPSDAD
AAAQGPDIEATDFSGHGWCQQPSVALPQVQQKLQAVQVVPRGCLLGVHLMCLSVPGIQMG
ILRVPVPIHQPSSTQGCCCSPDQRTGDLGAPCESPCAPRPSSTDEITGSCNDEAQYCTDE
SLIYVKDISAEGAINRKAKYEVLIQRVCDEPYLNFVVQEASRFIHTNNNKTIVEICQPFT
LCQTLYLYQLLYSSQQSIRQCFYDVTFTGPLRSTSKPV

>gi568815587f:113875326_114089760|GENSCAN_predicted_CDS_5|1377_bp
atgggccttcaccagaatggaatctaccagcccctggatcttggtcttctcaacctccag
ggccagggcaagacccagaaccacatccacaagggccccaagtttggtcaacaggtcaag
tttcaaacagccccacaattatcccatagtggggtgtggacccagaatgtttgccctgca
tcagctcctgggattggtgttgaaagctccacaggtgttcctgatgcaaagctggatgga
gaactatttcccctggaaggtccacacccagccctcactctaaacttccccttctcagct
ccagatggtggaaggagaaatacctacactctccctggatgctgtgggacttggaatgca
aatttctctcccggctctgcgaggtcagcaggagagatgatgcaagaggcctgcagctgg
acctcctggctggtacaagtcacctgctccagcatccgatctcaagttattcagcagccc
ctggggtttcttgatgaccaacagcagcccttaagtggtagtgtcagaggaaaggagatt
tgggggtctgcagcccacccatgtgcatgtggctacccacctctctcctcctctctttct
cacaaaagtctaaagatcccccagggccacgcccatgccccacagtcattcagttaccag
tgcatctccaggtcaggggtggataaccggcatttcagcaagttcccaagtgatgcagat
gctgctgctcagggaccagacattgaagccactgacttcagtggtcatggctggtgtcag
cagccaagcgtagctctgccccaggtgcaacagaagctgcaggcagtgcaggtggtgcca
cgtggctgccttctgggagtgcacctgatgtgcctttctgtgcctggaatccagatgggg
atacttagagtccctgtccccatacaccaaccatcttcgacccaaggttgttgctgtagc
cctgatcagaggacaggggatctgggggctccatgtgaatcaccttgtgctccaaggcca
agttccactgatgaaatcacagggagctgcaatgatgaagcccagtactgtacagatgaa
agtcttatttatgtgaaagatatatctgcagagggagcaataaaccgcaaagcaaagtat
gaagtattaattcaacgggtctgtgatgaaccatacctcaactttgttgtgcaggaagct
tctagatttatacatacgaacaataataaaaccatagttgaaatttgtcaaccatttact
ttgtgccagaccctttacctgtatcagctcctttattcttcacagcaatccataaggcag
tgcttttatgatgtcacctttacaggaccattgaggagcacctcaaagccagtgtga

>gi568815587f:113875326_114089760|GENSCAN_predicted_peptide_6|423_aa
MDLTKMGMIQLQNPSHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFE
ILFHRNSQHYTLDFLSPKTFQQILEYAYTATLQAKAEDLDDLLYAAEILEIEYLEEQCLK
MLETIQASDDNDTEATMADGGAEEEEDRKARYLKNIFISKHSSEESGYASVAGQSLPGPM
VDQSPSVSTSFGLSAMSPTKAAVDSLMTIGQSLLQGTLQPPAGPEEPTLAGGGRHPGVAE
VKTEMMQVDEVPSQDSPGAAESSISGGMGDKVEERGKEGPGTPTRSSVITSARELHYGRE
ESAEQVPPPAEAGQAPTGRPEHPAPPPEKHLGIYSVLPNHKADAVLSMPSSVTSGLHVQP
ALAVSMDFSTYGGLLPQGFIQRELFSKLGELAVGMKSESRTIGEQCSVCGVELPDNEAVE
QHR

>gi568815587f:113875326_114089760|GENSCAN_predicted_CDS_6|1272_bp
atggatctgacaaaaatgggcatgatccagctgcagaaccctagccaccccacggggcta
ctgtgcaaggccaaccagatgcggctggccgggactttgtgcgatgtggtcatcatggtg
gacagccaggagttccacgcccaccggacggtgctggcctgcaccagcaagatgtttgag
atcctcttccaccgcaatagtcaacactatactttggacttcctctcgccaaagaccttc
cagcagattctggagtatgcatatacagccacgctgcaagccaaggcggaggacctggat
gacctgctgtatgcggccgagatcctggagatcgagtacctggaggaacagtgcctgaag
atgctggagaccatccaggcctcagacgacaatgacacggaggccaccatggccgatggc
ggggccgaggaagaagaggaccgcaaggctcggtacctcaagaacatcttcatctcgaag
cattccagcgaggagagtgggtatgccagtgtggctggacagagcctccctgggcccatg
gtggaccagagcccttcagtctccacttcatttggtctttcagccatgagtcccaccaag
gctgcagtggacagtttgatgaccataggacagtctctcctgcagggaactcttcagcca
cctgcagggcccgaggagccaactctggctgggggtgggcggcaccctggggtggctgag
gtgaagacggagatgatgcaggtggatgaggtgcccagccaggacagccctggggcagcc
gagtccagcatctcaggagggatgggggacaaggttgaggaaagaggcaaagaggggcct
gggaccccgactcgaagcagcgtcatcaccagtgctagggagctacactatgggcgagag
gagagtgccgagcaggtgccacccccagctgaggctggccaggcccccactggccgacct
gagcacccagcacccccgcctgagaagcatctgggcatctactccgtgttgcccaaccac
aaggctgacgctgtattgagcatgccgtcttccgtgacctctggcctccacgtgcagcct
gccctggctgtctccatggacttcagcacctatggggggctgctgccccagggcttcatc
cagagggagctgttcagcaagctgggggagctggctgtgggcatgaagtcagagagccgg
accatcggagagcagtgcagcgtgtgtggggtcgagcttcctgataacgaggctgtggag
cagcacaggtag

>gi568815587f:113875326_114089760|GENSCAN_predicted_peptide_7|45_aa
MPKIPPLEATTIFLDVNPKEGIKMVPKNNVKRLLNRVTLKTFFFP

>gi568815587f:113875326_114089760|GENSCAN_predicted_CDS_7|138_bp
atgcctaagataccaccattggaggctacaaccatcttccttgacgtcaatcctaaagaa
gggataaagatggtacctaaaaacaatgtgaagcggctgctaaatcgagtgactctaaaa
acatttttctttccttga