GENSCAN 1.0	Date run:  4-Nov-116	Time: 22:51:55

Sequence gi568815587r:35160897_35417517 : 256621 bp : 41.47% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    432    675  244  2  1   45   87   185 0.972  12.04
 1.02 Intr +   5716   5879  164  2  2   41   51   119 0.391   2.27
 1.03 Intr +   9568   9652   85  0  1  102   24    82 0.560   1.67
 1.04 Intr +  15706  15844  139  2  1   77  110   202 0.696  19.90
 1.05 Intr +  19378  19511  134  1  2  121   77    82 0.960   9.77
 1.06 Intr +  25936  26004   69  2  0   85   44   109 0.875   4.44
 1.07 Intr +  28939  29169  231  2  0   91   72   233 0.978  18.82
 1.08 Intr +  37225  37350  126  2  0   40   63   133 0.502   5.73
 1.09 Intr +  39750  39964  215  1  2   38   61   174 0.849   7.21
 1.10 Intr +  43616  43763  148  1  1   63   38   168 0.352   8.19
 1.11 Intr +  50350  50553  204  2  0   80   91   135 0.989  11.25
 1.12 Intr +  53956  54018   63  2  0   94  101    21 0.721   1.77
 1.13 Intr +  58420  58491   72  2  0   78  109    35 0.715   3.06
 1.14 Intr +  60758  60836   79  0  1   43  116    76 0.776   3.59
 1.15 Term +  68233  68437  205  1  1   45   41   305 0.956  17.36
 1.16 PlyA +  69103  69108    6                               1.05

 2.03 PlyA -  69863  69858    6                               1.05
 2.02 Term -  77546  77255  292  1  1   17   32   195 0.029   0.63
 2.01 Init -  86856  86705  152  0  2   67   61   111 0.088   5.86
 2.00 Prom -  98783  98744   40                              -3.45

 3.20 PlyA -  99972  99967    6                               1.05
 3.19 Term - 100069  99998   72  1  0   51   49   116 0.534   0.93
 3.18 Intr - 104862 104631  232  2  1  138   83   162 0.967  17.55
 3.17 Intr - 112106 111949  158  2  2   91   20   135 0.633   4.89
 3.16 Intr - 120105 119971  135  0  0   92   87   125 0.675  12.64
 3.15 Intr - 121362 121170  193  2  1   66   74    51 0.763   0.07
 3.14 Intr - 126055 125861  195  0  0  122  100   257 0.887  27.91
 3.13 Intr - 131624 131391  234  1  0  141   80    79 0.505   8.28
 3.12 Intr - 140749 140623  127  2  1   61  103    76 0.835   5.22
 3.11 Intr - 145346 145178  169  2  1   63   68   197 0.581  13.80
 3.10 Intr - 151552 151302  251  2  2   90   91   246 0.819  21.33
 3.09 Intr - 154279 154127  153  2  0  131  110    54 0.999  11.02
 3.08 Intr - 156620 156481  140  1  2  110   74   158 0.848  15.79
 3.07 Intr - 161783 161665  119  2  2   80   94    26 0.013   0.74
 3.06 Intr - 182731 182449  283  0  1   57   68   148 0.074   6.20
 3.05 Intr - 194657 194526  132  1  0  104   54    85 0.057   5.54
 3.04 Intr - 198623 198501  123  1  0   33  111    95 0.122   5.08
 3.03 Intr - 203156 202941  216  1  0   45   86    90 0.033   1.20
 3.02 Intr - 208557 208507   51  2  0   81   99    59 0.450   3.40
 3.01 Init - 210355 210264   92  1  2   64   56    73 0.176   1.71
 3.00 Prom - 213225 213186   40                              -7.45

 4.00 Prom + 213947 213986   40                              -6.05
 4.01 Init + 214655 214866  212  1  2   62   84   162 0.970  11.51
 4.02 Intr + 215849 216057  209  2  2   37   47   144 0.167   3.00
 4.03 Intr + 220343 220464  122  0  2   53   87    61 0.130   1.79
 4.04 Intr + 224599 224675   77  0  2   63   95    50 0.588   0.59
 4.05 Intr + 230121 230219   99  0  0  125   48    65 0.707   4.51
 4.06 Intr + 233688 233775   88  0  1   60  115    40 0.035   2.95
 4.07 Intr + 235912 236211  300  0  0   16   86   121 0.014   0.71
 4.08 Intr + 237067 237233  167  0  2   85   19   132 0.115   3.84
 4.09 Intr + 243402 243577  176  0  2   55   49   181 0.430   9.56
 4.10 Term + 254241 254446  206  1  2   87   54   131 0.236   6.15
 4.11 PlyA + 254753 254758    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 157956 157859   98  0  2   63   74    61 0.807   2.03


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:35160897_35417517|GENSCAN_predicted_peptide_1|725_aa
MHNIPQELKPGLGPKSFLDLSDPSHMVTAISQYNEGKSLQSPVTSNCEAMDGIDVRGSGE
PCKRSEGLGVDTSQLHSAGQRSLTAMTGSRLHGKKAEKSGGPARRQDVGVPCISKCQVMN
SSVESNPGHILEEILWPYSNERAKGLVAFLPREVSSPNPKVASNSVFHVEKNGRYSISRT
EAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSICAANNTGVYIL
TSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPED
IYPSNPTDDDVSSGSSSERSSTSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATSTSSN
TISAGWEPNEENEDERDRHLSFSGSGIDDDEDFISSTIICLFTRRIYKQHTVTKSLGFQV
QRDTTDCMDGQNGAFGYPRWRAGVFKAVLPTAAASLTVLSGRSHVLNPKSRQLLVVQRKK
QLPRRNSGLATDGMRDIAKHPKKTPIRQQGQLVMDGLTNRNDVTGGRRDPNHSEGSTTLL
EGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVTVGDSNSNVNRSLSGDQDTFHPSGGSHT
THGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCG
QKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLVNKESSETPDQFMTADETRNLQNVD
MKIGV

>gi568815587r:35160897_35417517|GENSCAN_predicted_CDS_1|2178_bp
atgcataacatcccacaagagctcaagccaggacttggacccaagtctttcttggatctt
tccgatccaagccatatggttactgcaatctcacaatacaatgagggtaaatccttgcaa
tcaccagttaccagcaattgtgaagcaatggatggcatagatgtcagggggtcaggagag
ccttgcaagcgttcagagggcttgggagtggacacatcacagttgcactctgctgggcag
cgctcgttgactgccatgacaggctccaggctccacggaaaaaaggcagagaaatcaggg
ggtccagccaggcgccaagacgttggggtgccttgcatttctaagtgccaagtgatgaat
agctcagttgaaagcaacccagggcacattctggaggaaattctctggccctatagtaat
gagcgtgctaaaggcctggtggcatttctaccacgggaagtctcctctccaaatccaaaa
gtggcctcaaacagtgtattccacgtggagaaaaatggtcgctacagcatctctcggacg
gaggccgctgacctctgcaaggctttcaatagcaccttgcccacaatggcccagatggag
aaagctctgagcatcggatttgagacctgcaggtatgggttcatagaagggcacgtggtg
attccccggatccaccccaactccatctgtgcagcaaacaacacaggggtgtacatcctc
acatccaacacctcccagtatgacacatattgcttcaatgcttcagctccacctgaagaa
gattgtacatcagtcacagacctgcccaatgcctttgatggaccaattaccataactatt
gttaaccgtgatggcacccgctatgtccagaaaggagaatacagaacgaatcctgaagac
atctaccccagcaaccctactgatgatgacgtgagcagcggctcctccagtgaaaggagc
agcacttcaggaggttacatcttttacaccttttctactgtacaccccatcccagacgaa
gacagtccctggatcaccgacagcacagacagaatccctgctaccagtacgtcttcaaat
accatctcagcaggctgggagccaaatgaagaaaatgaagatgaaagagacagacacctc
agtttttctggatcaggcattgatgatgatgaagattttatctccagcaccattatctgc
ctcttcacccggaggatctacaaacagcacacagtgactaagtccctgggctttcaagtg
cagagggatactacagactgcatggatgggcaaaatggcgcctttggttatcctcggtgg
agggctggtgttttcaaagctgtccttcctactgctgcagcttctttgactgttttatct
ggaagatctcatgttctgaaccccaagtccaggcaactcctagtagtacaacggaagaaa
cagctacccagaaggaacagtggtttggcaacagatggcatgagggatatcgccaaacac
ccaaagaagactcccattcgacaacagggacagctggtaatggatggtttaacaaatagg
aatgatgtcacaggtggaagaagagacccaaatcattctgaaggctcaactactttactg
gaaggttatacctctcattacccacacacgaaggaaagcaggaccttcatcccagtgacc
tcagctaagactgggtcctttggagttactgcagttactgttggagattccaactctaat
gtcaatcgttccttatcaggagaccaagacacattccaccccagtggggggtcccatacc
actcatggatctgaatcagatggacactcacatgggagtcaagaaggtggagcaaacaca
acctctggtcctataaggacaccccaaattccagaatggctgatcatcttggcatccctc
ttggccttggctttgattcttgcagtttgcattgcagtcaacagtcgaagaaggtgtggg
cagaagaaaaagctagtgatcaacagtggcaatggagctgtggaggacagaaagccaagt
ggactcaacggagaggccagcaagtctcaggaaatggtgcatttggtgaacaaggagtcg
tcagaaactccagaccagtttatgacagctgatgagacaaggaacctgcagaatgtggac
atgaagattggggtgtaa

>gi568815587r:35160897_35417517|GENSCAN_predicted_peptide_2|147_aa
MEDCRTTKGNTCKERELCGLPPKALALVWAPPSRHNVINRMPVFCTSKNHSLECKDAHLH
PLLSGFTLRIRERKSGGRTQFLRRQRACCKASTRGRIINRAEKANKMVENEVSAKDVNLD
GKIFITLILGLTDEHIALFSVSFYTKV

>gi568815587r:35160897_35417517|GENSCAN_predicted_CDS_2|444_bp
atggaggattgtagaaccacaaagggcaatacctgcaaagagcgtgaactgtgtggcctg
ccacctaaggcactggccctagtgtgggcacctccttccaggcacaatgtcataaacagg
atgccagtgttctgtacgtcaaagaaccacagccttgagtgcaaggatgcccaccttcac
cctcttctttctggttttaccttgaggattcgagaacggaagtcaggcggaaggactcag
tttctacgaagacaaagggcatgttgtaaagcatccactagggggcgcattatcaacagg
gcagagaaggccaacaagatggttgaaaacgaagtttctgcaaaggacgtgaaccttgat
gggaaaattttcattactctcatccttggcttgacagatgaacacattgcacttttctca
gtcagcttttacacaaaggtctaa

>gi568815587r:35160897_35417517|GENSCAN_predicted_peptide_3|1024_aa
MREAHKQEANETMGNKEMGLAFRVSTVGETNWGVGESLKASGKEPGACLCAWDGSNGKQC
RVLGLRVILFLPVPLPPAKLLSLVEQEIPLSAGTDLACLVHLRVLVLCRCLNENQSVRKS
DLGLLSQMTAVDRTVFDVFEVKTLARKTLKQLTAFSLQYSSWCIDHFLLFCADTQQNKAV
SRHNPWMLFFPVNSSTLTSANHLKWLLTPEPEGIQGLVRKIVKVWRVIASEKYTLKKGEC
VCTQESHAQWGLRLLTLRVSLTKEWNIHEGSWKKVKISQNCGATHFYTKYGCFGTVMVLG
DLVSSSRAISGHLYLPSTSPDPEAWGQGGEVRCQQWKDSANNMPKQVEVRMHDSHLGSEE
PKHRHLGLRLCDKLGKNLLLTLTVFGVILGAVCGGLLRLASPIHPDVVMLIAFPGDILMR
MLKMLILPLIISSLITGLSGLDAKASGRLGTRAMVYYMSTTIIAAVLGVILVLAIHPGNP
KLKKQLGPGKKNDEVSSLDAFLDLIRNLFPENLVQACFQQIQTVTKKVLVAPPPDEEANA
TSAVVSLLNETVTEVPEETKMVIKKGLEFKDGMNVLGLIGFFIAFGIAMGKMGDQAKLMV
DFFNILNEIVMKLVIMIMWYSPLGIACLICGKIIAIKDLEVVARQLGMYMVTVIIGLIIH
GGIFLPLIYFVVTRKNPFSFFAGIFQAWITALGTASSAGTLPVTFRCLEENLGIDKRVTR
FVLPVGATINMDGTALYEAVAAIFIAQMNGVVLDGGQIVTVRWIQGNWSALSLDTMDGEG
KGVVGGSVDHTQGKCLCKDGPKPGNDGNRGKNSSNHRLSRGLNLPNPHSHPGKRRRGQYP
QCRAGHHAPHSDSRGPANRGHQPAGGCGLAAEFQTISHFPVGGFRLRDEDEREYLGTCFS
FSEPDPVTQCEVTRSSPSLIFGSWDRMRTSVNVVGDSFGAGIVYHLSKSELDTIDSQHRV
HEDIEMTKTQSIYDDMKNHRESNSNQCVYAAHNSVIVDECKVTLAANGKSADCSVEEEPW
KREK

>gi568815587r:35160897_35417517|GENSCAN_predicted_CDS_3|3075_bp
atgagggaagctcataaacaagaggcaaatgaaacaatgggaaacaaggaaatggggctt
gcattcagagtttcaacagtgggtgagacaaactggggagtgggagagagcctcaaggca
tctggtaaggaacctggagcttgcctctgtgcatgggatggcagcaatggaaaacagtgc
agggtcctgggtctgagggtcatcctctttctgccggtgcccctgccacctgctaagctc
ttgtctttggtggaacaggaaataccactcagtgcaggtacagacctagcctgccttgta
cacctccgtgtcctggtcctttgtagatgcttgaatgagaaccaatcagtgaggaaaagt
gaccttgggctcctgagccaaatgacagcagtcgataggacagtttttgatgtctttgag
gtcaaaacactggctaggaaaactttaaagcagctgacagctttttctctgcagtatagc
agctggtgcattgaccacttcctgctgttttgtgcagacacgcagcaaaacaaggcagtc
agcaggcacaacccatggatgctttttttcccagtgaactccagtacacttacaagtgct
aatcatctgaaatggctcttgacaccagagccagaaggaattcaaggactagtcaggaaa
atagtgaaagtatggagagttattgcaagtgaaaagtatacactcaagaaaggggagtgt
gtgtgtactcaagaaagtcatgcccagtggggtttgcggcttctaactttacgagtttct
ttaaccaaggagtggaatattcatgaaggttcctggaaaaaggtgaagatttctcagaac
tgtggtgccacccatttttacaccaaatatggttgtttcggaactgtcatggtgctgggt
gacctagtgtcttccagtagggcaatctctggacatctttatctccccagtacctctcca
gatcctgaagcctggggccagggaggagaggttagatgtcagcagtggaaggacagtgcc
aacaatatgcccaagcaggtggaagtgcgaatgcacgacagtcatcttggctcagaggaa
cccaagcaccggcacctgggcctgcgcctgtgtgacaagctggggaagaatctgctgctc
accctgacggtgtttggtgtcatcctgggagcagtgtgtggagggcttcttcgcttggca
tctcccatccaccctgatgtggttatgttaatagccttcccaggggatatactcatgagg
atgctaaaaatgctcattctccctctaatcatctccagcttaatcacagggttgtcaggc
ctggatgctaaggctagtggccgcttgggcacgagagccatggtgtattacatgtccacg
accatcattgctgcagtactgggggtcattctggtcttggctatccatccaggcaatccc
aagctcaagaagcagctggggcctgggaagaagaatgatgaagtgtccagcctggatgcc
ttcctggaccttattcgaaatctcttccctgaaaaccttgtccaagcctgctttcaacag
attcaaacagtgacgaagaaagtcctggttgcaccaccgccggacgaggaggccaacgca
accagcgctgttgtctctctgttgaacgagactgtgactgaggtgccggaggagactaag
atggttatcaagaagggcctggagttcaaggatgggatgaacgtcttaggtctgataggg
tttttcattgcttttggcatcgctatggggaagatgggagatcaggccaagctgatggtg
gatttcttcaacattttgaatgagattgtaatgaagttagtgatcatgatcatgtggtac
tctcccctgggtatcgcctgcctgatctgtggaaagatcattgcaatcaaggacttagaa
gtggttgctaggcaactggggatgtacatggtaacagtgatcataggcctcatcatccac
gggggcatctttctccccttgatttactttgtagtgaccaggaaaaaccccttctccttt
tttgctggcattttccaagcttggatcactgccctgggcaccgcttccagtgctggaact
ttgcctgtcacctttcgttgcctggaagaaaatctggggattgataagcgtgtgactaga
ttcgtccttcctgttggagcaaccattaacatggatggtacagccctttatgaagcggta
gccgccatctttatagcccaaatgaatggtgttgtcctggatggaggacagattgtgact
gtaagatggattcaaggaaattggagtgctctgagccttgacaccatggacggggagggg
aagggtgtggttggggggtctgtagatcacacccagggcaagtgtctatgcaaggatggg
cctaaacctgggaatgatggcaataggggaaaaaacagctcaaaccacaggctctccagg
ggccttaatcttccaaaccctcacagccaccctggcaagcgtcggcgcggccagtatccc
cagtgccgggctggtcaccatgctcctcattctgacagccgtgggcctgccaacagagga
catcagcctgctggtggctgtggactggctgctgagttccagacgatttcacatttccct
gttggaggatttagactgagagatgaagatgagagagagtaccttggtacttgtttttct
ttcagtgaaccagacccagtgactcagtgtgaagtaactcggtcaagcccctctctcatt
tttggttcctgggacaggatgagaacttcagtcaatgttgtgggtgactcttttggggct
gggatagtctatcacctctccaagtctgagctggataccattgactcccagcatcgagtg
catgaagatattgaaatgaccaagactcaatccatttatgatgacatgaagaaccacagg
gaaagcaactctaatcaatgtgtctatgctgcacacaactctgtcatagtagatgaatgc
aaggtaactctggcagccaatggaaagtcagccgactgcagtgttgaggaagaaccttgg
aaacgtgagaaataa

>gi568815587r:35160897_35417517|GENSCAN_predicted_peptide_4|551_aa
MEPPCGSSIQALGPPVKVAISVGPREPCLKTPGPCCKVVTLVRATQVLADPGSGISRSLG
LDWDEEGYRGGHLDLLQKKKQKQKPDYFHMLQDMNLSSPPLFDSYPQCRYSTNFLNPCTL
MEAARKSLDHLEVEGHFVASMVSPRMGVAEAQPMRLFSGPLPRSIRKEALSIAEIIFSED
AKNLQRGLGSSQMFFLRTPYSDMVWDLVATRKSSILSVASAIFLLDGDDHEQGQSTMVHR
EFTPLYHLQFLLVSCKATIPPVKDGMEPQLISNFSKVSGYKINVQKSQAFLYTNNTQTES
QIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRIN
IVKMAILPKSLKLTKHIVRYDRRIAGPAASSTGRAKTWVSQHALTVVLRITRGLEHPESI
HSDDKKNQAEHTQAPEPANLVRTPLMTPRGSQEDKDKDEDEDPGPAGEWQLLSTHFQPQP
VVPAEASSLKDFSLSDTSFKAKAKGDTKHLIVLHGRGKEVAIDTDEQICLLVFNNMEFLP
HKFHLDLEIIS

>gi568815587r:35160897_35417517|GENSCAN_predicted_CDS_4|1656_bp
atggaacccccgtgtggtagtagcatccaagctttgggccctccagtcaaggtggctatt
tcagttgggccacgagaaccatgtctaaaaaccccaggtccttgctgcaaagtcgtcact
ctggtcagagccacacaagtacttgcagacccgggcagtggcatcagcaggtcactgggc
ctggactgggatgaggagggctacagaggaggacacctggatctgcttcagaaaaaaaag
caaaaacaaaaaccagattacttccacatgcttcaagatatgaatctatcatctccccct
ctctttgactcatatcctcaatgtcgctattcgacaaatttcctcaacccctgcacattg
atggaagctgctaggaaaagcctggatcacttggaggttgaaggtcattttgtagccagc
atggtcagcccaagaatgggtgtggctgaagcccagccaatgagactcttctctgggcct
cttcctagaagtatcagaaaagaggcactttccattgctgaaatcattttctctgaggat
gctaagaacctgcagaggggtctgggtagcagtcaaatgttctttctcagaacaccttac
agcgacatggtttgggaccttgtggctacaagaaaatctagtattctatctgtggcctct
gctatatttctgttggatggggatgatcacgagcagggtcagtcaaccatggtccacaga
gaattcactccattgtaccaccttcagtttctcctagtcagctgcaaggccaccatccca
ccagttaaggatgggatggaaccccagctgataagcaacttcagcaaagtctcaggatac
aaaatcaatgtgcaaaaatcacaagcattcttatacaccaacaacacacaaacagagagc
caaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatc
caacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaaagaa
ataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaat
attgtgaaaatggccatactgcccaagtctttaaaactcacaaagcatattgtgagatat
gacagaaggattgctggtccagcagccagcagcacaggcagggctaaaacctgggtttct
caacatgctttgactgtggtcctcaggataacaaggggactggaacatcctgagtccatc
cacagtgatgacaaaaaaaaccaggctgaacatacccaagctccggaaccagcaaatctt
gttcgaaccccgctgatgactcccaggggaagccaagaggacaaagacaaggatgaggac
gaggacccaggacccgctggtgaatggcaactgctgtcaactcactttcaacctcagcca
gttgtcccagctgaagcatcatcacttaaggacttttccttgtctgacacatcctttaaa
gccaaagccaaaggagacacaaaacacctaattgtgttgcatggaagaggaaaagaagtg
gccattgatactgatgaacagatttgtcttttggtttttaataacatggagtttctgcct
cacaagtttcatctggatttagaaattatttcctga