GENSCAN 1.0	Date run:  4-Nov-116	Time: 23:27:12

Sequence gi568815592r:88043859_88245274 : 201416 bp : 38.53% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3859   4255  397  0  1   61   77   484 0.393  37.83
 1.02 Intr +  10088  10144   57  0  0   59  103    58 0.795   2.34
 1.03 Intr +  13754  13855  102  0  0   51   68   164 0.946   9.93
 1.04 Intr +  14858  14964  107  0  2   85   89    22 0.967   1.01
 1.05 Intr +  15595  15730  136  0  1   61  103   131 0.993  11.12
 1.06 Intr +  20667  20760   94  1  1   52  119    -5 0.698  -2.90
 1.07 Term +  22324  22477  154  1  1  106   41   146 0.828   8.11
 1.08 PlyA +  22539  22544    6                               1.05

 2.02 PlyA -  24948  24943    6                               1.05
 2.01 Sngl -  45196  44891  306  1  0   40   55   207 0.965   8.22
 2.00 Prom -  45458  45419   40                              -4.35

 3.06 PlyA -  48759  48754    6                               1.05
 3.05 Term -  49646  49479  168  2  0   79   33   124 0.822   2.90
 3.04 Intr -  55013  54980   34  1  1   31   59    37 0.007  -7.59
 3.03 Intr -  56921  56639  283  0  1   96  101   106 0.379   8.25
 3.02 Intr -  71597  71453  145  2  1   49   98    68 0.204   2.83
 3.01 Init -  72322  72257   66  1  0   59   86    57 0.438   3.72
 3.00 Prom -  83464  83425   40                              -3.35

 4.02 PlyA -  84079  84074    6                               1.05
 4.01 Sngl - 101416  99998 1419  1  0   49   52  1302 0.977 117.45
 4.00 Prom - 103629 103590   40                              -6.45

 5.04 PlyA - 103687 103682    6                               1.05
 5.03 Term - 103884 103743  142  2  1   43   41   184 0.210   5.62
 5.02 Intr - 122896 122718  179  1  2   11   50   228 0.124   9.10
 5.01 Init - 123799 123707   93  1  0   45   44   146 0.134   6.37
 5.00 Prom - 125922 125883   40                              -6.25

 6.03 PlyA - 126035 126030    6                               1.05
 6.02 Term - 126852 126783   70  2  1   71   39   134 0.082   3.23
 6.01 Init - 141489 141359  131  0  2   47   58   171 0.342   9.67
 6.00 Prom - 155741 155702   40                              -4.25

 7.00 Prom + 161727 161766   40                              -7.85
 7.01 Init + 166773 166923  151  2  1   74   74   112 0.926   8.65
 7.02 Intr + 167815 167920  106  2  1   35   80    79 0.667   0.15
 7.03 Intr + 169286 169368   83  2  2   76   30    88 0.141   0.16
 7.04 Term + 185163 185374  212  1  2   60   42   129 0.781   1.97
 7.05 PlyA + 185512 185517    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:88043859_88245274|GENSCAN_predicted_peptide_1|348_aa
PSSARVPGAQHRSSAPATIEASRFVTGFGAGRLRAGCRSSLRRTCPQEPRRRLRLGRPSG
PRTMSPRGTGCSAGLLMTVGWLLLAGLQSARGTNVTAAVQDAGLAHEGEGEEETENNDSE
TAENYAPPETEDVSNRNVVKEVEFGMCTVTCGIGVREVILTNGCPGGESKCVVRVEECRG
PTDCGWGKPISESLESVRLACIHTSPLNRFKYMWKLLRQDQQSIILVNDSAILEVRKESH
PLAFECDTLDNNEIVATIKFTVYTSSVVVLSTLKLGYCNLLIHLYDNIYNTYMSSTPWAA
VKAFWGAKASTPEVQSEQSSVRYKDSTSLDQLPTEMPGEDDALSEWNE

>gi568815592r:88043859_88245274|GENSCAN_predicted_CDS_1|1047_bp
cctagctccgcgcgagttccaggcgctcagcaccggagcagcgccccggcaaccattgag
gcgtcacggttcgtcacgggattcggagccgggcggctacgggcggggtgtcgcagctct
cttcgacgtacctgtcctcaggagccgcggcggcgactgcgcctcggacggccgtcgggg
ccgagaaccatgagccccaggggcacgggctgctccgccgggctgctgatgactgtcggc
tggctgcttctggcgggcctccagtccgcgcgcgggaccaacgtcaccgctgccgtccag
gatgccggcctggcccacgaaggcgagggcgaggaggagaccgaaaacaacgacagcgag
accgcggagaactacgctccgcctgaaaccgaggatgtttcaaataggaatgtcgtcaaa
gaagtagaattcggaatgtgcaccgttacatgtggtattggtgttagagaagttatatta
acaaatggatgccctggtggtgaatccaagtgtgttgtacgggtagaagaatgccgtgga
ccaacagattgtggctggggtaaaccaatttcagaaagtcttgaaagtgttagattggca
tgtattcacacatctcccttaaatcgtttcaaatatatgtggaaacttctaagacaagac
caacaatccattatacttgtaaatgattcagcaatcctagaagtacgcaaggaaagtcac
cccttggctttcgagtgtgacacactggataataatgaaatagtagcaactattaaattc
acagtctatacgagcagtgttgtggttctctcaactctaaaacttggttattgtaaccta
ctaattcatttgtatgacaatatttataatacctacatgagtagtacaccctgggcagca
gtcaaggctttctggggggcaaaagcctctacacctgaggtacaatccgagcagagttct
gtgagatacaaagattcaacttctcttgaccaattaccaacagaaatgcctggtgaagat
gatgctttaagtgaatggaatgaatga

>gi568815592r:88043859_88245274|GENSCAN_predicted_peptide_2|101_aa
MKTACLSFDEKPSSCLGKGIFQNTGGIRVVVGRDSDTQAEERWKRHLSGNHPYRFHQKLQ
WKQSPFPAAALKEAPPRIRNRQTRRLRASSGDKNWKRKIEG

>gi568815592r:88043859_88245274|GENSCAN_predicted_CDS_2|306_bp
atgaagacggcttgcttgtcctttgatgaaaaacccagcagctgtctgggaaaggggatc
ttccagaacacaggggggattcgggtggtggtagggagagactctgacacacaggcagag
gaaagatggaaacggcatctttcagggaaccatccttatcgcttccatcagaagctgcag
tggaaacaatcaccttttccggcagcagctctgaaggaggcaccccccagaatcagaaac
aggcagactaggcgtttgagagcatcctctggagacaagaactggaaaaggaaaatagag
ggatga

>gi568815592r:88043859_88245274|GENSCAN_predicted_peptide_3|231_aa
MSGVQKKDAGRWESLQEQVDTKGSAPPCGPALGCSLVKTRNINVSLLQSNAQDENVKEEA
MKNEAEIGKSGHTPSNKCETFGGYFPRIFCNRTLEPLALARSHPVERAFIFNTSLLLLLH
SFLALFMHFIQFFFQNTKNLDTLHKQQYEVIAAQNKQTDTKKGRILKVRVDVNTREVLVQ
HPGRIRSHTDLKDECRCFIDRWRWFSVGWMGSWKKEVAGRRSSPGVWPSSS

>gi568815592r:88043859_88245274|GENSCAN_predicted_CDS_3|696_bp
atgagtggggtgcagaaaaaagatgcaggcagatgggagagtctgcaggagcaagtggac
acaaagggatctgcacctccttgtgggccagccttggggtgttctctagtcaaaacaaga
aacataaatgtatccctgctgcaatctaatgctcaagatgaaaatgtaaaggaggaggct
atgaaaaatgaagctgagattgggaagtcagggcatacaccaagtaacaaatgtgaaacc
ttcggaggatacttccccagaatattctgtaaccggacccttgagccgcttgctctggcc
cgttctcaccctgtggagcgtgctttcattttcaatacatctctgctcttgttgcttcat
tctttccttgccttgtttatgcattttatccaattcttttttcaaaacactaagaaccta
gacacgctccacaagcaacaatatgaagttattgcagcccaaaataagcaaacagacaca
aagaagggaagaatacttaaggtccgtgttgatgttaataccagagaggtccttgtccag
catccaggaagaatcaggtcacacacagacttgaaggatgaatgccggtgttttattgac
cggtggaggtggttctcagtgggatggatgggaagctggaagaaggaagtagcgggaaga
cgatcttcccctggagtttggccatccagcagctaa

>gi568815592r:88043859_88245274|GENSCAN_predicted_peptide_4|472_aa
MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL

>gi568815592r:88043859_88245274|GENSCAN_predicted_CDS_4|1419_bp
atgaagtcgatcctagatggccttgcagataccaccttccgcaccatcaccactgacctc
ctgtacgtgggctcaaatgacattcagtacgaagacatcaaaggtgacatggcatccaaa
ttagggtacttcccacagaaattccctttaacttcctttaggggaagtcccttccaagag
aagatgactgcgggagacaacccccagctagtcccagcagaccaggtgaacattacagaa
ttttacaacaagtctctctcgtccttcaaggagaatgaggagaacatccagtgtggggag
aacttcatggacatagagtgtttcatggtcctgaaccccagccagcagctggccattgca
gtcctgtccctcacgctgggcaccttcacggtcctggagaacctcctggtgctgtgcgtc
atcctccactcccgcagcctccgctgcaggccttcctaccacttcatcggcagcctggcg
gtggcagacctcctggggagtgtcatttttgtctacagcttcattgacttccacgtgttc
caccgcaaagatagccgcaacgtgtttctgttcaaactgggtggggtcacggcctccttc
actgcctccgtgggcagcctgttcctcacagccatcgacaggtacatatccattcacagg
cccctggcctataagaggattgtcaccaggcccaaggccgtggtggcgttttgcctgatg
tggaccatagccattgtgatcgccgtgctgcctctcctgggctggaactgcgagaaactg
caatctgtttgctcagacattttcccacacattgatgaaacctacctgatgttctggatc
ggggtcaccagcgtactgcttctgttcatcgtgtatgcgtacatgtatattctctggaag
gctcacagccacgccgtccgcatgattcagcgtggcacccagaagagcatcatcatccac
acgtctgaggatgggaaggtacaggtgacccggccagaccaagcccgcatggacattagg
ttagccaagaccctggtcctgatcctggtggtgttgatcatctgctggggccctctgctt
gcaatcatggtgtatgatgtctttgggaagatgaacaagctcattaagacggtgtttgca
ttctgcagtatgctctgcctgctgaactccaccgtgaaccccatcatctatgctctgagg
agtaaggacctgcgacacgctttccggagcatgtttccctcttgtgaaggcactgcgcag
cctctggataacagcatgggggactcggactgcctgcacaaacacgcaaacaatgcagcc
agtgttcacagggccgcagaaagctgcatcaagagcacggtcaagattgccaaggtaacc
atgtctgtgtccacagacacgtctgccgaggctctgtga

>gi568815592r:88043859_88245274|GENSCAN_predicted_peptide_5|137_aa
MNAKAATRGRPGTEPSAQHGALVADVTWLRQVLAMRAARERVINGPEVVGGACTSPFLAW
SGCEGIREHSEVMAAGASGSAAAEEEEEEENCVASDQKGTGPEKSRKTGQKAGALTLVSS
DEILEVEVAECGKVGHI

>gi568815592r:88043859_88245274|GENSCAN_predicted_CDS_5|414_bp
atgaacgccaaggcggccacaagaggacggccgggaaccgaacccagcgcccagcacggg
gcccttgtggccgacgtgacgtggctccgtcaggtgttggcgatgcgcgctgcccgggag
cgtgtgattaatggccccgaggtcgtgggcggcgcatgcaccagccccttcttggcctgg
tcagggtgtgagggtatccgggagcacagcgaggtcatggcagcgggggcctccgggagc
gcggcggcggaggaggaggaggaagaggagaactgtgtggcaagtgatcaaaaaggaaca
ggaccagagaagagcaggaaaactggtcagaaagcaggcgccctaaccctggtgagcagt
gatgagatcctggaagtggaggtggcagaatgtgggaaggtgggccacatttaa

>gi568815592r:88043859_88245274|GENSCAN_predicted_peptide_6|66_aa
MLLSTAMELTLHKEQLPDAWTASRLQTQPDMDSECHTDNDTLLRWDVKDLDLMKEGEKVN
DNNKKP

>gi568815592r:88043859_88245274|GENSCAN_predicted_CDS_6|201_bp
atgctgctcagcactgcaatggaactaaccttacacaaagagcagctgccagatgcctgg
actgcaagccgcctgcaaacccaacctgacatggacagcgaatgccacactgataatgac
accttgctccgctgggatgttaaagatctggatttaatgaaagaaggtgagaaggtgaac
gacaacaacaaaaagccctaa

>gi568815592r:88043859_88245274|GENSCAN_predicted_peptide_7|183_aa
MRKICICSSYKGIVKIEIEIEIEKVHEKRGKLGDDTVFRELLPLFELPKTGFCGGILKKG
YSLSWTLSSDKARCAGNINSLRLASRKRNSEFEKLPYLIPDSVTPKEESAGRLSLEADRS
QQPQASSPPQCHIACSEPGLQACSSTVSPSASRLQVHPNTAQALAAPGFGTMPGTLTRIS
GQS

>gi568815592r:88043859_88245274|GENSCAN_predicted_CDS_7|552_bp
atgagaaaaatctgcatctgctcaagttacaaagggattgtgaagattgagattgagata
gaaatagagaaagtgcatgaaaaaaggggaaaacttggtgatgacactgttttcagagag
ctgttaccactctttgagcttcctaagacaggcttctgtgggggaatcctgaaaaaagga
tatagcttgtcatggactctttcttctgataaagctcgctgtgctggaaacattaatagc
ctacgacttgcttccaggaagagaaatagtgaatttgagaaattaccatacctcattcct
gactcagtgactccaaaagaggaatcagcaggaagactgtccctagaggcagacaggtct
cagcagccccaggcttccagtccaccccagtgccatattgcctgcagtgaacctgggctt
caggcttgctccagcactgtcagccccagtgcttccaggcttcaagtacaccccaacact
gcacaagccttagcagctccaggttttggaaccatgccaggcaccctgaccagaatctct
ggacaaagctga