GENSCAN 1.0	Date run:  5-Nov-116	Time: 20:27:44

Sequence gi568815589r:20977309_21177869 : 200561 bp : 37.16% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1031   1146  116  0  2  107   31    81 0.773   3.55
 1.02 Intr +   5049   5138   90  2  0   56   85   124 0.924   8.17
 1.03 Intr +   8980   9157  178  0  1  121   76    56 0.674   6.27
 1.04 Intr +  11024  11121   98  0  2   57   93    57 0.633   1.91
 1.05 Intr +  12815  13066  252  1  0  109  100    54 0.769   5.41
 1.06 Intr +  15945  16020   76  2  1   77   62    86 0.392   3.07
 1.07 Term +  19034  19122   89  0  2   69   55    78 0.224  -0.56
 1.08 PlyA +  22001  22006    6                               1.05

 2.00 Prom +  33097  33136   40                              -4.15
 2.01 Sngl +  43673  44851 1179  1  0   54   49   371 0.633  25.52
 2.02 PlyA +  46074  46079    6                               1.05

 3.00 Prom +  51469  51508   40                              -4.85
 3.01 Init +  54653  54692   40  1  1   77  105    13 0.325   2.33
 3.02 Intr +  55234  55343  110  2  2  116  108     7 0.967   4.58
 3.03 Term +  59476  59598  123  0  0  123   48    81 0.980   5.00
 3.04 PlyA +  61930  61935    6                               1.05

 4.03 PlyA -  61996  61991    6                               1.05
 4.02 Term -  68368  68180  189  1  0   59   43   137 0.990   2.77
 4.01 Init -  70387  70280  108  1  0   62   25   177 0.747   9.07
 4.00 Prom -  71867  71828   40                              -8.15

 5.04 PlyA -  72566  72561    6                               1.05
 5.03 Term -  73922  73545  378  2  0   75   42   349 0.496  22.80
 5.02 Intr -  77409  77336   74  1  2   99   78    42 0.558   2.51
 5.01 Init -  81104  80987  118  2  1   82   28    60 0.351  -0.19
 5.00 Prom -  82110  82071   40                              -7.25

 6.00 Prom +  85003  85042   40                              -3.35
 6.01 Init +  90675  90797  123  2  0   67   68   129 0.817   9.02
 6.02 Term +  99031  99129   99  0  0   82   29   117 0.426   2.35
 6.03 PlyA +  99276  99281    6                               1.05

 7.02 PlyA -  99595  99590    6                               1.05
 7.01 Sngl - 100561  99998  564  1  0  102   49   441 0.824  35.49
 7.00 Prom - 105579 105540   40                              -0.45

 8.00 Prom + 116222 116261   40                              -3.65
 8.01 Init + 119203 119415  213  0  0   67   88   133 0.278   9.99
 8.02 Intr + 129325 129452  128  0  2   18   65   160 0.197   5.26
 8.03 Term + 129973 130081  109  1  1   26   35   118 0.129  -2.70
 8.04 PlyA + 130610 130615    6                               1.05

 9.04 PlyA - 131582 131577    6                               1.05
 9.03 Term - 147212 146909  304  1  1   25   44   905 0.833  73.46
 9.02 Intr - 159060 158954  107  0  2   92  105    36 0.525   3.79
 9.01 Init - 162576 162520   57  0  0   59  100    36 0.501   3.26
 9.00 Prom - 162716 162677   40                             -10.25

10.02 PlyA - 163041 163036    6                               1.05
10.01 Sngl - 164262 163675  588  0  0   54   44   431 0.794  29.23
10.00 Prom - 175543 175504   40                              -3.15

11.02 PlyA - 176481 176476    6                               1.05
11.01 Sngl - 189304 188735  570  1  0   59   47   330 0.800  20.81

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:20977309_21177869|GENSCAN_predicted_peptide_1|299_aa
XEEIQQLCLEIMVTQAQSSQNAAALLGLWVTPPLIHSLSRKDLELYISIAKCLLEMTDDD
ANRIAQVTKSNIEKAAFVKLYLVSQGRFPLVNLTDMLSVAVQHREKEVLAWMILHSLYQA
RIVSHANTGVLKRMEWLLELMGYIRNVAYQSTSFHNTALDKALDFFLLIFATAVVAWADH
TAPLLLGLSASWLPWHQENGPAGPVPSFLGRSPMHRVTLQEVLTLLPNSMALLLQKEPWK
EQTQKFIDWLFSIMESPKEALSAQSRDLLKESFLIAGKMSASDLKGKERCLPTDTAEAT

>gi568815589r:20977309_21177869|GENSCAN_predicted_CDS_1|900_bp
ngtgaagagatccagcaactgtgccttgaaattatggtgacccaggcacagtcatcccag
aatgcagctgcactattgggcttgtgggtgacaccaccactgatccacagtctgagtaga
aaggatctagagctgtatatcagcatagcaaaatgcctcttagaaatgacagatgatgat
gccaatcggatcgcccaggttactaagagcaacatagaaaaagctgcctttgtcaaactg
tacttagtctctcaaggacgattccccttggtgaacctgaccgatatgctgagcgttgct
gtgcagcaccgtgagaaagaggtgttggcctggatgattctgcacagcttataccaggca
cggattgtgagccatgccaatacgggcgttttgaagagaatggagtggctcttggaactg
atgggttatattagaaatgttgcttaccagtcaacatcctttcacaatacggctcttgac
aaggctttggacttcttcttgctgatatttgcaaccgcagtggttgcatgggctgaccac
actgcccctctcctcctcggcctcagtgccagttggttgccatggcatcaggagaatggc
ccggctgggccagtaccaagcttccttggcaggagtccaatgcacagggtcactctgcag
gaggttctcactctccttcccaatagcatggctctgctgctgcagaaagagccatggaag
gaacagacccagaagttcattgactggctattcagcatcatggaaagccctaaagaagcc
ctctcagcacagtccagggatcttttgaaagaatcattcctcatagctggcaagatgtct
gccagtgacctcaaagggaaagaaaggtgtctgcccacagatacagcagaagcaacatga

>gi568815589r:20977309_21177869|GENSCAN_predicted_peptide_2|392_aa
MHRANRVQQHIKKLIHHDQVGFIPGMQGWFNILRSINVIHHINRTKDKNHMIISIDAEKA
FDKIQQPFMLKNLHKLGIDGTYLKIIRAIYDKPTANIILNWQKLEAFPMKTGTRQGCPLS
PLLFNIMLEVLARAIRQEKEIKGIQLGKEEVKLSLSADDMIVYLENPIVSAQNLLKLISN
FSKVSGYRINAQNSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLKRDVKDLFKEN
YKPLLNEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTT
LKFIWNQKRARITKTILSQKNKARGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRREP
SEVIPHIYNHLIFDKPDKNNKWGKDSLFNKWC

>gi568815589r:20977309_21177869|GENSCAN_predicted_CDS_2|1179_bp
atgcacagggcaaaccgagtccagcagcacatcaaaaagcttatccaccacgatcaagtt
ggcttcatccctgggatgcaaggctggttcaacatactcagatcaataaacgtaatccat
catataaacagaaccaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcc
tttgacaaaattcagcagcccttcatgctaaaaaatctccataagctaggtattgatggg
acgtatctcaaaataataagagctatttatgacaaaccgacagccaatatcatactgaat
tggcaaaaactggaagcattccctatgaaaactggcacaagacagggatgccctctctca
ccactcctattcaacataatgttggaagttctggccagggcaatcaggcaggagaaggaa
ataaagggtattcaattaggaaaagaggaagtcaaattgtctctgtctgcagatgacatg
attgtatatttagaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaac
ttcagcaaagtctcaggatacagaatcaatgcgcaaaactcacaagcattcctatatacc
aataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttcaaag
agaataaaatacctaggaatccaacttaaaagggatgtgaaggacctcttcaaggagaac
tacaaaccactgctcaacgaaataaaagaggacacaaacaaatggaagaacattccatgc
tcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttataga
ttcaatgccatccccatcaagctaccaatgactttcttcacggaactggaaaaaactact
ttaaagttcatatggaaccaaaaaagagcccgcatcaccaagacaatcctaagccaaaag
aacaaagctagaggcatcacgctacctgacttcaaactatactacaaggctacagtaacc
aaaacagcatggtactggtaccaaaacagagatatagaccaatggaacagaagagagccc
tcagaagtaataccacacatctacaaccatctgatctttgacaaacctgacaaaaacaac
aaatggggaaaggattccctatttaataaatggtgctag

>gi568815589r:20977309_21177869|GENSCAN_predicted_peptide_3|90_aa
MSGFQGGLCSMPTDDPPSCFANKIQPIFKLLCPERETLKQKQKHLRRHLQASIRSSFSLP
SPHPPGSSFGNFCAGTALSLPHCALNLVLP

>gi568815589r:20977309_21177869|GENSCAN_predicted_CDS_3|273_bp
atgagtggattccagggtgggctctgctcaatgcccaccgatgacccaccctcctgcttt
gctaataagatccagcccatcttcaagctcctctgcccagaaagggaaacgttaaaacaa
aaacagaaacatctaagaaggcacttgcaagcctccattcgttcttcattctctctgcca
tctcctcatccccctggcagttcattcggaaacttctgtgcaggcactgccctgtctctc
ccacattgtgccctgaatttggtgctaccctaa

>gi568815589r:20977309_21177869|GENSCAN_predicted_peptide_4|98_aa
MRTQEGEGDMVVDSSGALRAQQQEVVNNWQKSQEDEALDKKQSTAMVPERRITPAFCLGE
VSKPWHREVNSYWKAALLLERENKYWSSRRLKRLEVCY

>gi568815589r:20977309_21177869|GENSCAN_predicted_CDS_4|297_bp
atgaggacccaagaaggagaaggagatatggtagtggacagcagcggagcactgagggct
caacagcaggaagtggttaacaactggcagaaaagccaggaagatgaggcactggacaag
aaacagtccacggctatggtccctgagagaaggataacaccagctttctgcctaggggaa
gtttccaagccatggcacagggaagtgaattcctattggaaagcagcactcctgctggag
agagaaaacaaatattggagttcaaggcggctgaagaggctagaagtgtgctattag

>gi568815589r:20977309_21177869|GENSCAN_predicted_peptide_5|189_aa
MCHGGLLHRSFHHLGIKPNIPLAVLPDALPPSPYPPTGPSKGVPLWLRIRAHYGVSEMSP
EFPETMKVMLDKKQVQAIFLFKYKMGGKAAVFATLTMHLAQELLMNVVQWWFKKFCKREE
NLEGEERSGQSSEVDNKLRVLIEADPLTTTQEVAEELNVSHSTVVCHLKQTGKVTKFNKW
VPHELTKNF

>gi568815589r:20977309_21177869|GENSCAN_predicted_CDS_5|570_bp
atgtgccatggcggtttgctgcacagatcattccatcacctgggtattaagcccaacatt
ccattagctgttcttcctgatgctctccctccttctccttaccctccaacaggccccagt
aaaggggttccactatggctacgcattagagcccactatggagtttccgaaatgtctcca
gaatttccagagactatgaaagtgatgttggacaaaaaacaagttcaagcaattttctta
ttcaagtacaaaatgggtggtaaagcagcggtgtttgcaacattgacaatgcatttggcc
caggaactgctaatgaatgtagtgcagtggtggttcaagaagttttgcaaaagagaggag
aaccttgaaggtgaggagcgtagtggccagtcatcggaagttgacaacaaattgagagta
ctcatcgaagctgatcctcttacaactacacaagaagttgccgaagaactcaatgtcagc
cattctacagttgtttgccatctgaagcaaactggaaaggtgacaaagttcaataagtgg
gtgcctcatgagctgaccaaaaatttttaa

>gi568815589r:20977309_21177869|GENSCAN_predicted_peptide_6|73_aa
MLLLNKMMSPWKLPQLDSHNPFSEPLEGFVALSECSQVIPLELCGVRNAEQQKTGQDIPG
ILYEQGSGDWKQA

>gi568815589r:20977309_21177869|GENSCAN_predicted_CDS_6|222_bp
atgctgctgctgaataagatgatgtctccttggaagttaccacagcttgatagccataat
cccttctcagaacctttagaaggctttgtggccctgtctgagtgttcccaagttattccg
ctggaactatgtggcgtccgcaatgcagagcaacagaaaactggacaggacattcctgga
attctgtatgaacaaggcagtggggactggaagcaggcttag

>gi568815589r:20977309_21177869|GENSCAN_predicted_peptide_7|187_aa
MTNKCLLQIALLLCFSTTALSMSYNLLGFLQRSSNFQCQKLLWQLNGRLEYCLKDRMNFD
IPEEIKQLQQFQKEDAALTIYEMLQNIFAIFRQDSSSTGWNETIVENLLANVYHQINHLK
TVLEEKLEKEDFTRGKLMSSLHLKRYYGRILHYLKAKEYSHCAWTIVRVEILRNFYFINR
LTGYLRN

>gi568815589r:20977309_21177869|GENSCAN_predicted_CDS_7|564_bp
atgaccaacaagtgtctcctccaaattgctctcctgttgtgcttctccactacagctctt
tccatgagctacaacttgcttggattcctacaaagaagcagcaattttcagtgtcagaag
ctcctgtggcaattgaatgggaggcttgaatactgcctcaaggacaggatgaactttgac
atccctgaggagattaagcagctgcagcagttccagaaggaggacgccgcattgaccatc
tatgagatgctccagaacatctttgctattttcagacaagattcatctagcactggctgg
aatgagactattgttgagaacctcctggctaatgtctatcatcagataaaccatctgaag
acagtcctggaagaaaaactggagaaagaagatttcaccaggggaaaactcatgagcagt
ctgcacctgaaaagatattatgggaggattctgcattacctgaaggccaaggagtacagt
cactgtgcctggaccatagtcagagtggaaatcctaaggaacttttacttcattaacaga
cttacaggttacctccgaaactga

>gi568815589r:20977309_21177869|GENSCAN_predicted_peptide_8|149_aa
MRVMQQVKRKLNVNCRIGIEEWSGYSPLPWCLPEASAAYLHKAEDSSGCLEDASVILVKT
FSSSKGRENQEGLPGQTPDWISSAAGRPGDLLGIEDGKQESALEIEGPTLAIKSHALALV
TDLEYEMHNPCPYGIHITAKDTAIEEVII

>gi568815589r:20977309_21177869|GENSCAN_predicted_CDS_8|450_bp
atgagggtgatgcaacaagtgaaaaggaaactaaatgtgaattgtcgaattggaattgaa
gaatggagcgggtattcccctttgccctggtgcttgcctgaggcaagtgctgcttatctt
cacaaagcagaagattcttctggctgcctggaagatgcctctgttattttagtgaaaaca
tttagctcctcgaaaggtagagagaaccaagagggccttcctggacaaactccagactgg
atttcatcagcagctggaagacctggagacctgcttggtatagaggatgggaagcaagag
tctgccctggaaattgagggccctacactggccataaagagtcatgctttggccttggtg
acagatcttgagtatgagatgcataatccttgcccttatggaattcacattacagcaaag
gacacagccattgaagaagttataatctag

>gi568815589r:20977309_21177869|GENSCAN_predicted_peptide_9|155_aa
MGKNEGESNEGKTVVLSGKSYSIQHFNSIDLNDMDVNLHGNFVHIDFHGLSRGPSTRSPT
REIRSKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEEDEDEDEEEEEE
EEEEEEEEEEEEEEEEEEEIKGIQRGKEEVISNCR

>gi568815589r:20977309_21177869|GENSCAN_predicted_CDS_9|468_bp
atgggaaagaatgagggagagtctaatgaggggaagacagtggtactttcagggaagagc
tactccattcagcatttcaatagcattgacctgaatgacatggatgtgaacttacatggc
aactttgttcacattgactttcacggtttgagtaggggtccaagtactagaagtcctacc
agagaaatcagatcaaaaaaaaaggaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagag
aaagaggaagaggaagaggaagaagaagacgaagacgaagacgaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaggaagaagaagaagaagaagaagaaata
aaaggcatccaaaggggaaaggaagaagttatctctaattgtagatga

>gi568815589r:20977309_21177869|GENSCAN_predicted_peptide_10|195_aa
MALLFPLLAALVMTSYSPVGSLGCDLPQNHGLLSRNTLVLLHQMRRISPFLCLKDRRDFR
FPQEMVKGSQLQKAHVMSVLHEMLQQIFSLFHTERSSAAWNMTLLDQLHTGLHQQLQHLE
TCLLQVVGEGESAGAISSPALTLRRYFQGIRVYLKEKKYSDCAWEVVRMEIMKSLFLSTN
MQERLRSKDRDLGSS

>gi568815589r:20977309_21177869|GENSCAN_predicted_CDS_10|588_bp
atggccctcctgttccctctactggcagccctagtgatgaccagctatagccctgttgga
tctctgggctgtgatctgcctcagaaccatggcctacttagcaggaacaccttggtgctt
ctgcaccaaatgaggagaatctcccctttcttgtgtctcaaggacagaagagacttcagg
ttcccccaggagatggtaaaagggagccagttgcagaaggcccatgtcatgtctgtcctc
catgagatgctgcagcagatcttcagcctcttccacacagagcgctcctctgctgcctgg
aacatgaccctcctagaccaactccacactggacttcatcagcaactgcaacacctggag
acctgcttgctgcaggtagtgggagaaggagaatctgctggggcaattagcagccctgca
ctgaccttgaggaggtacttccagggaatccgtgtctacctgaaagagaagaaatacagc
gactgtgcctgggaagttgtcagaatggaaatcatgaaatccttgttcttatcaacaaac
atgcaagaaagactgagaagtaaagatagagacctgggctcatcttga

>gi568815589r:20977309_21177869|GENSCAN_predicted_peptide_11|189_aa
MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISPFSCLKDRHDFG
FPQEEFDGNQFQKAQAISVLHEMIQQTFNLFSTKDSSATWEQSLLEKFSTELNQQLNDLE
ACVIQEVGVEETPLMNVDSILAVKKYFQRITLYLTEKKYSPCAWEVVRAEIMRSFSLSKI
FQERLRRKE

>gi568815589r:20977309_21177869|GENSCAN_predicted_CDS_11|570_bp
atggccctgtccttttctttactgatggccgtgctggtgctcagctacaaatccatctgt
tctctgggctgtgatctgcctcagacccacagcctgggtaataggagggccttgatactc
ctggcacaaatgggaagaatctctcctttctcctgcctgaaggacagacatgactttgga
ttcccccaggaggagtttgatggcaaccagttccagaaggctcaagccatctctgtcctc
catgagatgatccagcagaccttcaatctcttcagcacaaaggactcatctgctacttgg
gaacagagcctcctagaaaaattttccactgaacttaaccagcagctgaatgacctggaa
gcctgcgtgatacaggaggttggggtggaagagactcccctgatgaatgtggactccatc
ctggctgtgaagaaatacttccaaagaatcactctttatctgacagagaagaaatacagc
ccttgtgcctgggaggttgtcagagcagaaatcatgagatccttctctttatcaaaaatt
tttcaagaaagattaaggaggaaggaatga