GENSCAN 1.0	Date run:  5-Nov-116	Time: 00:07:41

Sequence gi568815589r:125136595_125341126 : 204532 bp : 43.87% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 PlyA -   1015   1010    6                               1.05
 1.08 Term -  13327  13079  249  1  0   50   54   185 0.862   7.00
 1.07 Intr -  17148  16939  210  0  0   73   88   134 0.903  11.01
 1.06 Intr -  17391  17312   80  1  2  133   87    39 0.999   7.57
 1.05 Intr -  21788  21647  142  2  1   69   95    34 0.871   2.13
 1.04 Intr -  34586  34491   96  2  0   93   98    60 0.954   7.71
 1.03 Intr -  52715  52596  120  2  0   94   17    78 0.185   1.99
 1.02 Intr -  53240  53050  191  0  2   12  105   332 0.640  26.60
 1.01 Init -  59129  58766  364  2  1   33   39   178 0.028   4.61
 1.00 Prom -  63554  63515   40                              -4.56

 2.00 Prom +  66337  66376   40                              -2.96
 2.01 Init +  66420  66472   53  2  2  100   26    34 0.804  -0.97
 2.02 Intr +  70970  71127  158  2  2  117   86   134 0.985  15.75
 2.03 Intr +  76776  76928  153  1  0   26  119   120 0.925   8.94
 2.04 Intr +  83945  84106  162  0  0   60   27   141 0.660   5.15
 2.05 Intr +  91280  91465  186  0  0   72   71    91 0.630   5.46
 2.06 Intr +  96002  96151  150  0  0  114   99   103 0.986  14.13
 2.07 Term +  97094  97386  293  0  2   62   38   145 0.636   2.41
 2.08 PlyA +  97950  97955    6                              -0.45

 3.08 PlyA -  98920  98915    6                               1.05
 3.07 Term - 100560  99998  563  1  2   80   42   702 0.999  59.34
 3.06 Intr - 101714 101547  168  0  0   68   86   101 0.994   7.82
 3.05 Intr - 102233 101996  238  2  1   83   96   283 0.921  25.79
 3.04 Intr - 102737 102347  391  1  1   54   80   549 0.999  45.43
 3.03 Intr - 102939 102827  113  0  2   96   97    87 0.999   9.58
 3.02 Intr - 104313 104082  232  2  1   57   58   574 0.526  49.08
 3.01 Init - 104532 104411  122  0  2   95  119   395 0.592  40.96
 3.00 Prom - 126134 126095   40                              -4.76

 4.02 PlyA - 126204 126199    6                               1.05
 4.01 Sngl - 127559 127221  339  2  0   31   37   367 0.893  21.93
 4.00 Prom - 148643 148604   40                              -2.36

 5.00 Prom + 159427 159466   40                              -6.66
 5.01 Init + 162328 162512  185  0  2   68  103   114 0.980   9.49
 5.02 Intr + 165389 166232  844  2  1   92   85   294 0.928  20.88
 5.03 Intr + 168469 168555   87  0  0   88   69    99 0.952   8.17
 5.04 Intr + 170819 170953  135  1  0   90   55    38 0.445   1.46
 5.05 Intr + 184839 184968  130  2  1  100   67   120 0.767  11.37
 5.06 Intr + 187204 187329  126  2  0   55   98    97 0.583   8.05
 5.07 Intr + 189822 189995  174  1  0   54   93   166 0.999  13.61
 5.08 Intr + 195332 195466  135  0  0   63   96    58 0.957   4.64
 5.09 Intr + 195916 196035  120  2  0   67  107    91 0.995   9.37
 5.10 Intr + 200424 200501   78  1  0  102   92    14 0.451   2.72
 5.11 Intr + 200627 200997  371  0  2  106   64    97 0.222   3.92

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:125136595_125341126|GENSCAN_predicted_peptide_1|483_aa
MEQYIYKRKSDGIYIINLKRTWEKLLLAAHAIVAIENPADASVISPRNTGQRVVLKFAAA
TRATPVAGHFTPGTFTNQIQAPSGSHSFLWLLTPGLTTSLKQRHLMLTYLPLLCVIQILL
CSATHGPDVTQGKFRLRPPPLPPPLLQPPPPLLPRLVILKMAPLDLDKYVEIARLCKYLP
ENDLKSEPSPRGSALGMGSPPPEVTGARSGRRLTGDATGYRNAASRLCDYVCDLLLEESN
VQPVSTPVTVCGDIHGQGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQV
YGFYDECQTKYGNANAWRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTLDQIRTIERN
QEIPHKGAFCDLVWSDPEDVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHE
GYKFMFDEKLVTVWSAPNYCYRCGNIASIMVFKDVNTREPKLFRAVPDSERVIPPRTTTP
YFL

>gi568815589r:125136595_125341126|GENSCAN_predicted_CDS_1|1452_bp
atggaacagtacatctataaaaggaaaagtgatggcatctacatcataaatctgaagagg
acctgggagaagcttctgctggcagctcatgccattgttgccattgaaaaccctgctgat
gccagtgttatatcccctaggaatactggccagagggttgtgctgaagtttgctgctgcc
accagagccactccagttgctggccacttcactcctggaaccttcactaaccagatccag
gctccttccgggagccacagctttttgtggttactgaccccagggctgaccaccagcctc
aaacagaggcatcttatgttaacctacctaccattgctctgtgtaatacagattctcctc
tgcagcgccactcacgggccggacgtgacgcagggaaagttccggcttcggcctccgccg
ctgccgccgccgctgctacagccgccgccgccgctgttgccgcggcttgttattcttaaa
atggcgccgctagacctggacaagtatgtggaaatagcgcggctgtgcaagtacctgcca
gagaacgacctgaagtcggagccgagcccccgcggcagtgccctcgggatggggtcgcct
ccaccggaggtgacaggagcgcggagtggccggcgtctgacaggagatgccaccggctac
cggaacgcggcctcacggctatgtgactacgtttgtgacctcctcttagaagagtcaaat
gttcagccagtatcaacaccagtaacagtgtgtggagatatccatggacagggtgatttt
gtagacagaggttactatagtttggagaccttcacttaccttcttgcattaaaggctaaa
tggcctgatcgtattacacttttgcgaggaaatcatgagagtagacagataacacaggtc
tatggattttatgatgagtgccaaaccaaatatggaaatgctaatgcctggagatactgt
accaaagtttttgacatgctcacagtagcagctttaatagatgagcagattttgtgtgtc
catggtggtttatctcctgatatcaaaacactggatcaaattcgaaccatcgaacggaat
caggaaattcctcataaaggagcattttgtgatctggtttggtcagatcctgaagatgtg
gatacctgggctatcagtccccgaggagcaggttggctttttggagcaaaggtcacaaat
gagtttgttcatatcaacaacttaaaactcatctgcagagcacatcaactagtgcacgaa
ggctataaatttatgtttgatgagaagctggtgacagtatggtctgctcctaattactgc
tatcgttgtggaaatattgcttcgatcatggtcttcaaagatgtaaatacaagagaacca
aagttattccgggcagttccagattcagaacgtgttattcctcccagaacgacaacgcca
tatttcctttga

>gi568815589r:125136595_125341126|GENSCAN_predicted_peptide_2|384_aa
MKQLPVLEPGDKPRKATWYTLTVPGDSPCARVGHSCSYLPPVGNAKRGKVFIVGGANPNR
SFSDVHTMDLGKHQWDLDTCKGLLPRYEHASFIPSCTPDRIWVFGGANQSGNRNCLQVLN
PETRTWTTPEVTSPPPSPRTFHTSSAAIGNQLYVFGGGERGAQPVQDTKLHVFDAILPFD
VIEFTFLDTLTWSQPETLGNPPSPRHGHVMVAAGTKLFIHGGLAGDRFYDDLHCIDISDM
KWQKLNPTGAAPAGCAAHSAVAMGKHVYIFGGMTPAGALDTMYQYHTEEQHWTLLKFDTL
LPPGRLDHSMCIIPWPVTCASEKEDSNSLTLNHEAEKEDSADKVMSHSGDSHEESQTATL
LCLVFGGMNTEGEIYDDCIVTVVD

>gi568815589r:125136595_125341126|GENSCAN_predicted_CDS_2|1155_bp
atgaagcaactgccagtcttggaacctggagacaagcccaggaaagcaacatggtacacc
ttgactgtccctggagacagcccctgtgctcgagttggccacagctgttcatatttaccc
ccagttggtaatgccaagagagggaaggtcttcattgttgggggagcaaatccaaacaga
agcttctcagacgtgcacaccatggatctgggaaaacaccagtgggacttagatacctgc
aagggcctcttgccccggtatgaacatgctagcttcattccctcctgcacacctgaccgt
atctgggtatttggaggtgccaaccaatcaggaaatcgaaattgtctacaagtcctgaat
cctgaaaccaggacgtggaccacgccagaagtgaccagccccccaccatccccaagaaca
ttccacacatcatcggcagccattggaaaccagctatatgtctttgggggcggagagaga
ggtgcccagcccgtgcaggacacgaagctgcatgtgtttgacgcaattttgccatttgat
gttattgaatttacttttctagacactctgacctggtcacagccagagacacttggaaat
cctccatctccccggcatggtcatgtgatggtggcagcagggacaaagctcttcatccac
ggaggcttggcgggggacagattctatgatgacctccactgcattgatataagtgacatg
aaatggcagaagctaaatcccactggggctgctccagcaggctgtgctgcccactcagct
gtggccatgggaaaacatgtgtacatctttggtggaatgactcctgcaggagcactggac
acaatgtaccagtatcacacagaagagcagcattggaccttgcttaaatttgatactctt
ctaccccctggacgattggaccattccatgtgtatcattccatggccagtgacgtgtgct
tctgagaaagaagattccaactctctcactctgaaccatgaagctgagaaagaggattca
gctgacaaagtaatgagccacagtggtgactcacatgaggaaagccagactgctacactg
ctctgtttggtgtttggtgggatgaatacagaaggggaaatctatgacgattgtattgtg
actgtagtggactaa

>gi568815589r:125136595_125341126|GENSCAN_predicted_peptide_3|608_aa
MKLSLVAAMLLLLSAARAEEEDKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNR
ITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVT
HAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLG
GGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQ
KLRREVEKAKRALSSQHQARIEIESFYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVL
EDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLS
GDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVY
EGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITI
TNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKL
SSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLYGSAGPPPTGEE
DTAEKDEL

>gi568815589r:125136595_125341126|GENSCAN_predicted_CDS_3|1827_bp
atgaagctctccctggtggccgcgatgctgctgctgctcagcgcggcgcgggccgaggag
gaggacaagaaggaggacgtgggcacggtggtcggcatcgacctggggaccacctactcc
tgcgtcggcgtgttcaagaacggccgcgtggagatcatcgccaacgatcagggcaaccgc
atcacgccgtcctatgtcgccttcactcctgaaggggaacgtctgattggcgatgccgcc
aagaaccagctcacctccaaccccgagaacacggtctttgacgccaagcggctcatcggc
cgcacgtggaatgacccgtctgtgcagcaggacatcaagttcttgccgttcaaggttacc
catgcagttgttactgtaccagcctattttaatgatgcccaacgccaagcaaccaaagac
gctggaactattgctggcctaaatgttatgaggatcatcaacgagcctacggcagctgct
attgcttatggcctggataagagggagggggagaagaacatcctggtgtttgacctgggt
ggcggaaccttcgatgtgtctcttctcaccattgacaatggtgtcttcgaagttgtggcc
actaatggagatactcatctgggtggagaagactttgaccagcgtgtcatggaacacttc
atcaaactgtacaaaaagaagacgggcaaagatgtcaggaaagacaatagagctgtgcag
aaactccggcgcgaggtagaaaaggccaaacgggccctgtcttctcagcatcaagcaaga
attgaaattgagtccttctatgaaggagaagacttttctgagaccctgactcgggccaaa
tttgaagagctcaacatggatctgttccggtctactatgaagcccgtccagaaagtgttg
gaagattctgatttgaagaagtctgatattgatgaaattgttcttgttggtggctcgact
cgaattccaaagattcagcaactggttaaagagttcttcaatggcaaggaaccatcccgt
ggcataaacccagatgaagctgtagcgtatggtgctgctgtccaggctggtgtgctctct
ggtgatcaagatacaggtgacctggtactgcttgatgtatgtccccttacacttggtatt
gaaactgtgggaggtgtcatgaccaaactgattccaaggaacacagtggtgcctaccaag
aagtctcagatcttttctacagcttctgataatcaaccaactgttacaatcaaggtctat
gaaggtgaaagacccctgacaaaagacaatcatcttctgggtacatttgatctgactgga
attcctcctgctcctcgtggggtcccacagattgaagtcacctttgagatagatgtgaat
ggtattcttcgagtgacagctgaagacaagggtacagggaacaaaaataagatcacaatc
accaatgaccagaatcgcctgacacctgaagaaatcgaaaggatggttaatgatgctgag
aagtttgctgaggaagacaaaaagctcaaggagcgcattgatactagaaatgagttggaa
agctatgcctattctctaaagaatcagattggagataaagaaaagctgggaggtaaactt
tcctctgaagataaggagaccatggaaaaagctgtagaagaaaagattgaatggctggaa
agccaccaagatgctgacattgaagacttcaaagctaagaagaaggaactggaagaaatt
gttcaaccaattatcagcaaactctatggaagtgcaggccctcccccaactggtgaagag
gatacagcagaaaaagatgagttgtag

>gi568815589r:125136595_125341126|GENSCAN_predicted_peptide_4|112_aa
MKFSFVYTVILSAFNDSNVLLKNQIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLH
VMKAMQSLKSQGYMKEQFAWRHFYWYLTNEGIQYLRDYLHLPPGDCTCYPTP

>gi568815589r:125136595_125341126|GENSCAN_predicted_CDS_4|339_bp
atgaaattctctttcgtctacactgtcatcctgtctgccttcaatgattcaaatgttctt
ctaaagaaccagattgccatttatgaactcctttttaaggagggagtcatggtggccaag
aaggatgtccacatgcctaagcacccagagctggcagacaagaacgtgcccaaccttcat
gtcatgaaggccatgcagtctctcaagtctcaaggctacatgaaggaacagtttgcctgg
agacatttctactggtaccttaccaatgagggtatccagtatctccgggattaccttcat
ctgccccccggagactgtacctgctaccctacgccatag

>gi568815589r:125136595_125341126|GENSCAN_predicted_peptide_5|795_aa
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLSRLRENPRLIASSLVAGEKL
NQENTQSVIYTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPSQQEKLFGEKGS
DRFRQKVQEMVESNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRTKSSLGKFDKSCVAAFLDVVIGGRAVETPPLSSVNLLEGLSRTVVYITYSQLITLVLN
MQLSDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVS
ELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWST
DVLGSDFDPNIDEDRLQEIAEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPG
LSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDEITHGAHQLTSPPSQSESL
LAMFDPLSSHEGASAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPNFGSHVLTPAEM
EAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPSWNRRPGNEERELPPAAAIGATSLVAAP
HSSSSSPSKDSSRGE

>gi568815589r:125136595_125341126|GENSCAN_predicted_CDS_5|2385_bp
atggtgaaactagatattcatactctggctcatcacctcaagcaggaacgcttatatgta
aactctgagaaacagctcattcagaggctcaatgcagatgtacttaagacagctgaaaag
ttgtatcgtacagcatggattgcgaagcaacagagaatcaatttggatcggcttatcata
accagtgctgaagcttcccctgctgaatgttgccaacatgccaaaattttggaagataca
caatttgttgatgggtataagcaattgggatttcaggagactgcttatggagaattcttg
agtcgattgagggaaaatcctcgtcttattgcctcctctttggttgctggagagaaactt
aatcaggagaacacacaaagtgttatttacacagtttttacctccctgtatggcaattgc
atcatgcaagaagatgaaagctacctccttcaggttttgcgatacttgattgaatttgaa
cttaaagaaagtgacaaccctaggcgacttttgaggagaggaacttgtgccttcagcatc
ttatttaaacttttttctgaaggactgttttctgccaaacttttcctcacagccacttta
catgagccaattatgcaactgcttgttgaagatgaagatcacctggaaacagatccaaac
aagctaattgagaggttctctccatctcagcaggaaaaactctttggagagaagggctca
gatagattcaggcaaaaagttcaagaaatggtggagtccaatgaagcaaagctagtggct
ttggtgaacaaatttattggttatctcaaacagaacacatattgttttccacatagttta
aggtggatcgtgtctcagatgtacaaaaccctctcctgtgtagataggctggaagttggg
gaggtcagggcaatgtgtactgatctcctgttggcctgcttcatttgtcctgcagttgtc
aatccagaacaatatggaataatttccgatgctcctattaatgaagtagcacgatttaat
ctgatgcaggtaggccgccttttgcagcagttagcaatgactggctctgaagagggagat
ccccgaacaaagagcagccttggaaagtttgacaaaagctgtgttgccgctttccttgat
gttgtgattgggggccgtgcagtggagacccctccattgtcttccgtcaatcttctggaa
ggattgagcagaactgtggtttatataacctacagtcagcttattactctggtcctaaac
atgcagctttcggatggaggacaaggagatgtccctgttgatgaaaacaaactccatggt
aaacctgataaaaccttgcgcttttccctctgcagtgataatctggaaggaatatctgaa
ggtccttcaaatcgctccaattcagtgtcctccctagacctagaaggagagtctgtgtca
gaacttggagcaggaccttctggcagtaatggagttgaagctctacagctgttagaacat
gagcaagctacaacacaggataaccttgatgataagctaaggaagtttgaaattcgtgac
atgatgggattaacagatgatagggacatatcagaaacagtgagtgagacctggagtaca
gacgtcttgggaagtgactttgaccctaatattgatgaagatcgcttgcaagaaattgca
gaggccccagacctaaagcaggaggagcgtctgcaagaactggagagctgttctggactg
ggtagcacatctgatgatacggatgtcagggaggtcagttcccgccccagcacaccaggc
ctcagtgttgtgtccggcataagtgcaacctctgaggatattcccaataagattgaagac
ctgagatctgagtgcagctctgattttgggggtaaagattctgtcactagtccagacatg
gatgaaataactcacggtgcccaccagctgacctctcctccttctcagtcagagtctctg
ctggccatgtttgatccactgtcttcacatgaaggggcttctgctgtggtaaggccaaag
gttcactatgctaggccatcgcatccaccaccagatcccccaatcctggaaggagctgtg
ggaggaaatgaggccaggttgccaaactttggttcccatgttttaactccagctgaaatg
gaggcattcaagcaaaggcattcttaccctgagagactagttcgaagcaggagctctgat
atagtatcttctgtccggagacccatgagtgaccccagctggaaccggcgtccaggaaat
gaagagcgagaactccctccagctgcagccattggtgctacttctttggtggctgcacct
cattcatcatcttcatccccgagtaaggactcctcaagaggagag