GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:51:00

Sequence gi568815587r:82882168_83097316 : 215149 bp : 40.53% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1549   1634   86  0  2   75  111    48 0.730   6.14
 1.02 Term +   7169   7445  277  2  1    7   44   183 0.132  -0.25
 1.03 PlyA +   7645   7650    6                               1.05

 2.04 PlyA -   8635   8630    6                               1.05
 2.03 Term -  19514  18857  658  1  1   25   52   318 0.983  14.33
 2.02 Intr -  19660  19541  120  0  0   26   21   163 0.062   2.09
 2.01 Init -  36398  36292  107  2  2   89   39   131 0.342   8.04
 2.00 Prom -  38958  38919   40                              -8.65

 3.00 Prom +  39009  39048   40                              -6.25
 3.01 Init +  43508  43545   38  1  2   65   80    17 0.238  -1.87
 3.02 Intr +  46610  46771  162  2  0   92  110    47 0.352   5.47
 3.03 Intr +  47990  48107  118  2  1   64   43    53 0.353  -2.05
 3.04 Term +  49565  52168 2604  1  0  100   42  1118 0.930  92.76
 3.05 PlyA +  52470  52475    6                               1.05

 4.03 PlyA -  52817  52812    6                               1.05
 4.02 Term -  60656  60415  242  0  2   66   39   149 0.437   3.00
 4.01 Init -  62851  62641  211  1  1   68   47   178 0.615  10.70
 4.00 Prom -  68691  68652   40                              -3.95

 5.00 Prom +  71333  71372   40                              -6.05
 5.01 Init +  74047  74248  202  0  1   74   50   126 0.597   5.04
 5.02 Term +  75531  75937  407  1  2   46   48   327 0.761  18.86
 5.03 PlyA +  76089  76094    6                               1.05

 6.06 PlyA -  76494  76489    6                               1.05
 6.05 Term -  82156  82044  113  2  2   62   43    74 0.514  -1.96
 6.04 Intr -  83662  83525  138  2  0   44   92   147 0.139  10.21
 6.03 Intr -  86431  86337   95  0  2   79   83    45 0.116   1.79
 6.02 Intr -  88486  88315  172  2  1   38   89   138 0.124   6.98
 6.01 Init -  88773  88698   76  0  1   88   68   103 0.137   7.68
 6.00 Prom -  89594  89555   40                              -6.95

 7.06 PlyA -  90989  90984    6                               1.05
 7.05 Term - 100248  99998  251  1  2   63   43   193 0.783   7.18
 7.04 Intr - 102403 102281  123  2  0    4   43   149 0.671   1.64
 7.03 Intr - 105603 105420  184  0  1  115  106   254 0.990  28.34
 7.02 Intr - 111955 111872   84  1  0   99  116    57 0.641   8.70
 7.01 Init - 115149 115057   93  0  0   30  110    55 0.188   2.33
 7.00 Prom - 122944 122905   40                              -3.25

 8.00 Prom + 131675 131714   40                              -3.75
 8.01 Init + 133270 133360   91  0  1   72   73    77 0.869   5.30
 8.02 Intr + 134687 134835  149  0  2   84  101    17 0.384   1.63
 8.03 Term + 139130 139207   78  1  0   62   41   130 0.549   2.48
 8.04 PlyA + 140308 140313    6                               1.05

 9.00 Prom + 145103 145142   40                              -5.25
 9.01 Init + 166717 166779   63  0  0  101   58    63 0.325   5.82
 9.02 Term + 182536 182646  111  0  0   55   38   109 0.117   0.18
 9.03 PlyA + 183538 183543    6                               1.05

10.03 PlyA - 184187 184182    6                               1.05
10.02 Term - 190200 190003  198  0  0   50   46   191 0.407   7.52
10.01 Intr - 200182 200086   97  0  1   89   86    47 0.635   3.69

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  18235  18068  168  1  0   85  116   200 0.869  20.08
S.002 Init -  19794  19541  254  0  2   69   21   166 0.902   4.86


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:82882168_83097316|GENSCAN_predicted_peptide_1|120_aa
MRLGAAAGLSDAQMSVTQGCLMKSQKGGCLGDRARLCLKKKTNKIKKRKKKKEKEEGWRK
EGEEEKERRGRGSEKKEKDDSSWRRQRQKQQRKLQKQQQKTQQQEQQKQKKKNSSWRRQC

>gi568815587r:82882168_83097316|GENSCAN_predicted_CDS_1|363_bp
atgagacttggtgctgctgcaggcctctcagatgcacagatgagtgtgacccaaggttgc
ttaatgaaatcacagaagggtggttgcctgggtgacagagcaagactctgtctcaaaaaa
aaaaccaacaaaataaaaaagaggaagaagaagaaggagaaggaggagggatggaggaag
gagggggaggaagagaaagaaagaagaggaagaggaagcgagaagaaggagaaggatgac
agctcctggaggaggcagaggcagaagcagcagaggaagctgcagaagcagcagcagaag
acgcagcagcaggagcagcagaagcagaagaaaaaaaacagctcctggaggaggcagtgt
tag

>gi568815587r:82882168_83097316|GENSCAN_predicted_peptide_2|294_aa
MACTAKARLSKKNKPGGIALPDFKLYYKAIVTKTPCSPGGEDQERAQATHSDSDRPNSVA
RRQPSNRISRVLFRRKANQKKAPQRVELSEEILQASGNDHFRQTAGRVFLPDRWISSTVR
KIGFGASLSLLGVGFPGKCGVSRSALGSGGVTERGNGSWMKRVEGALEARPGAVLGASTT
HGRREEGGGGRRQEGGGARSGFSGAGEERGRYLKEGTGTWRDLGAMWTRGDLCNGWVVRA
TQFWGDPRTEYHREWLGSRWRWVQGAQSLDLDPAVCDDVLRSLLSDLVQVPAPL

>gi568815587r:82882168_83097316|GENSCAN_predicted_CDS_2|885_bp
atggcctgcacagccaaagcaagactaagcaaaaagaacaaacctggaggcatcgcatta
cctgatttcaaactgtactataaggccatcgtcaccaaaacaccatgctcacctggggga
gaagaccaggaacgggcccaggcgacgcacagtgactcggaccggccgaactcagtagca
cgccggcagccttccaatcgaatctcccgcgtccttttccgccggaaagccaatcagaag
aaggcgccgcagagggtggagcttagcgaggaaatcctacaagcatctggaaacgaccat
tttcgtcaaactgcgggtagagtctttctccccgacaggtggatcagtagtacagtccgt
aaaattggttttggagcttcgctgagcctcctgggcgtagggttcccgggaaagtgtgga
gtgagccgcagcgccctggggtctggcggggtgactgaaagagggaatggaagctggatg
aagagggttgagggagctttggaagccagacccggcgctgtcctaggggctagcactacc
cacgggcggagggaggaagggggcggtggcaggaggcaggaggggggtggagcgcggagt
gggttttcgggtgccggagaagaaagggggcgttatttgaaagaagggaccgggacctgg
cgggatttaggggcgatgtggacccggggcgacctgtgtaatggatgggttgtgcgagca
acacagttttggggtgacccaagaacggagtatcatagggagtggttaggctccagatgg
aggtgggtgcaaggagcacagtctttggacctggacccagcggtctgcgacgacgtgctc
cgctcactgctgagtgatctagtgcaagttcccgcacctctctga

>gi568815587r:82882168_83097316|GENSCAN_predicted_peptide_3|973_aa
MDDVLNNSTMVARSNCPKCGSTGESGNANYRYKLSLKVAESNKLFVITVFGSCLDTFFGL
TATGLHRYIQDPNKIPETLDNDTTQNLLTKAVETCFVGQSFIFGVTNFENQPGQGSDASN
FLQQCSDHKRKAKALVACQIVLPDPGIAGFTVIDYFHQLLQTFNFRKLQCDSQAPNNHLL
ALDHSNSDLSSIYTSDSTSDFFKSCSKDTFSKFWQPSLEFTCIVSQLTDNDDFSASEQSK
AFGTLQQNRKSISIAEATGSSSCHDPIQDSWSLVSYMDKKSTAEKLGKELGLQAKELSAV
HSSHHEIGVNDSNLFSLEMREPLESSNTKSFHSAVEIKNRSQHELPCFQHHGIDTPTSLQ
KRSACCPPSLLRLEETASSSQDGDPQIWDDLPFSESLNKFLAVLESEIAVTQADVSSRKH
HVDNDIDKFHADHSRLSVTPQRTTGALHTPPIALRSSQVIVKANCSKDDFLFNCKGNLSP
SVEKESQPDNKVEAVSVNHNGRDMSEYFLPNPYLSALSSSSKDLETIVTLKKTIRISPHR
ESDHSSLNNKYLNGCGEISVSEMNEKLTTLCYRKYNDVSDLCKLENKQYCRWSKNQDDSF
TICRKLTYPLETLCNSPNRSTNTLKEMPWGHINNNVTQSYSIGYEGSYDASADLFDDIAK
EMDIATEITKKSQDILLKWGTSLAESHPSESDFSLRSLSEDFIQPSQKLSLQSLSDSRHS
RTCSPTPHFQSDSEYNFENSQDFVPCSQSTPISGFHQTRIHGINRAFKKPVFYSDLDGNY
EKIRIFPENDKQQASPSCPKNIKTPSQKIRSPIVSGVSQPDVFNHYPFAECHETDSDEWV
PPTTQKIFPSDMLGFQGIGLGKCLAAYHFPDQQELPRKKLKHIRQGTNKGLIKKKLKNML
AAVVTKKKTHKYNCKSSGWISKCPDIQVLAAPQLHPILGPDSCSEVKCCLPFSEKGPPSV
CETRSAWSPELFS

>gi568815587r:82882168_83097316|GENSCAN_predicted_CDS_3|2922_bp
atggatgatgtgttaaataattcgactatggtagccaggtctaattgtccaaaatgtggc
tctactggtgaatctggaaatgccaattacagatacaaactttccttaaaagttgcagaa
tcaaacaaattgtttgttattactgtatttggaagttgcttagatacattttttggtctt
actgccactggtttgcacaggtacattcaggatcctaataaaattccagaaacactggac
aatgatacaactcagaatctattaactaaagcagttgaaacttgctttgttggacaaagc
tttatttttggagtgacgaattttgaaaaccaacctggacaaggttcagatgccagtaac
ttcttacagcaatgctctgaccacaaaagaaaagccaaagcactagtggcttgccagatt
gttctaccagacccaggtattgcaggctttactgtcattgactacttccatcaacttttg
cagacttttaatttcaggaaacttcagtgtgactctcaggcacctaacaatcacttactt
gctttagatcactcaaatagtgatctcagcagcatatatacttctgacagcacttctgat
tttttcaagtcctgcagcaaggatactttttcaaaattctggcagccatcacttgaattc
acttgcattgtttcacaactaacagataatgatgatttttcagcttcagaacaaagtaag
gcctttggtactcttcagcagaacagaaagtccatctccattgcagaggccactggttcc
agtagctgccatgatcccattcaggattcatggagccttgtttcatatatggataaaaag
agtacagcagaaaagttgggtaaagaacttggcttacaagctaaggagctgagtgcagtt
cacagcagtcatcatgaaattggagttaatgactctaatttattctctttggaaatgcga
gagccccttgagtcaagtaatacaaaatccttccacagtgcagtggaaattaaaaatagg
tcccagcatgagctaccatgttttcagcatcatggtatagataccccaactagccttcag
aagagatctgcatgttgtccaccttcgttactcagacttgaagagacagccagcagttcc
caggatggtgaccctcaaatttgggatgatctgccattctctgaaagcctgaacaagttt
ctggcagttcttgaaagtgagattgctgtaacccaggcagatgtcagtagtaggaaacat
catgtagataatgacattgataaatttcatgcagaccacagcaggttatctgtgactccc
cagagaactactggagccctgcatacaccacctatagctttaagatcatcacaagtaata
gtcaaagcaaactgtagcaaagatgacttccttttcaactgtaaaggaaatctaagtcct
agtgttgaaaaggagtcacaaccagataacaaagtagaggctgtctctgtaaatcataat
ggaagagatatgtcagaatattttttaccgaatccttacctgtcagctctgtcttcatct
tcaaaagatttagaaacaatagttactcttaagaagactatcagaatctcaccacacagg
gagagtgaccattctagtctaaataacaaatatttgaatggatgtggagaaatatcagtt
tcagaaatgaatgaaaagttgacaactctgtgttataggaagtataatgatgtctctgat
ctttgcaaattagaaaataaacaatattgtaggtggtccaagaaccaagatgacagtttt
acaatttgcaggaaacttacatatcctttagaaactctttgcaatagtccaaatagaagt
acaaatacattgaaagaaatgccttggggacatatcaataacaacgtaacacagagctat
tctattggttatgaaggtagctatgatgcctctgctgatctctttgatgatattgctaaa
gaaatggacattgcaactgagattaccaaaaaatcacaggatattttgttaaaatgggga
acatctttggcagaaagtcacccttcagagtctgatttttcactgagatcactttctgaa
gacttcatccagccttcacaaaaattatccttgcaaagcctatctgactctaggcattca
agaacatgctctccaacacctcattttcaatcagattcagaatataattttgaaaatagt
caagactttgttccatgttcacagtcaactccaatttcagggttccaccaaacaagaatt
catgggataaacagagctttcaaaaaacctgtattttattcagatcttgatggtaactat
gaaaaaataaggattttccctgaaaatgacaaacagcaagccagcccaagctgtccaaaa
aatataaaaacacctagccagaaaatcagaagccctattgtatctggtgtttcacaacca
gacgttttcaatcactacccttttgctgagtgccatgaaactgatagtgatgaatgggtc
cctcctaccacacaaaaaatatttccttcagatatgcttggattccaaggcataggtcta
gggaaatgccttgctgcctatcatttccctgatcaacaagagttaccaagaaagaaactg
aaacatattagacaaggaaccaataaaggtttaattaagaagaaattaaagaatatgctt
gcagcagttgttacgaaaaagaaaactcataaatataactgtaaaagttcaggctggatt
tccaaatgtccagacattcaagtcttagcagcacctcagctgcaccctattcttggacct
gattcttgttcagaagtcaaatgttgccttccattttcagaaaaaggcccaccttcagtg
tgtgaaactcgaagtgcttggtcacctgaattgttttcataa

>gi568815587r:82882168_83097316|GENSCAN_predicted_peptide_4|150_aa
MWKRLWNWVTGRGWNSLEGSEEDRKMWESLEPPRDLLNGFAQNADNDIDNEIQAEVVSDG
DEELVGNWSRGRKKKEKLQPFGDPRPSSSLSQGCDILFGALQFLASPSFWAPPHSPMSAV
EVACGMTGPATALQRAGACAGSWSCPSCCS

>gi568815587r:82882168_83097316|GENSCAN_predicted_CDS_4|453_bp
atgtggaagcgactttggaactgggtaacaggcagaggttggaacagtttggaaggctca
gaagaagacaggaaaatgtgggaaagtttggaacctcctagagacttgttgaatggcttt
gcccaaaatgctgataatgatatagacaatgaaatccaggctgaggtggtctcagatgga
gatgaggaacttgttggcaattggagtagagggagaaaaaagaaagaaaagctgcagccc
tttggggatcccagacctagtagctccttaagccagggctgtgacatcctctttggggct
ctgcagttcctggcatctccaagcttctgggccccaccacattccccaatgtcagctgtg
gaagtagcttgtgggatgactggtccagccacagccttgcagagagctggtgcttgtgct
ggttcctggagctgcccatcctgctgcagttag

>gi568815587r:82882168_83097316|GENSCAN_predicted_peptide_5|202_aa
MVGAPPPTKLKHLWATSDCCASSENFKPVDLSLLGSMGMRPAKPDYLDPWLQPPFQGSEW
FHLTGVPAAQLLKLAHEYRPVTKQEKKQELLAHADRNAASNGDIPTKSSPVLQAGVNTVT
NSMVNKKSQLVLTAQDMDPIKLVVFLPALCCKMGVPYCVIKEKARPGSLVHRRTCIIVTF
TQVKWKKQGALAKLWELQDQLQ

>gi568815587r:82882168_83097316|GENSCAN_predicted_CDS_5|609_bp
atggtgggcgcccctcccccaaccaagctcaagcatctctgggcgacctcagactgctgt
gctagcagcgagaatttcaagccagtggatcttagcttgctgggctccatgggcatgcga
cctgccaagccagactacttggatccctggcttcagccccctttccagggaagtgaatgg
ttccatctcactggtgttccagctgctcagcttcttaagctggcccacgagtacagacca
gtgacaaagcaagagaagaagcaggaattgttggcccatgctgacaggaatgctgccagc
aatggagacatccccactaagagttcacctgtccttcaagcaggggttaatactgtcacc
aactcaatggtgaacaagaagtctcagctggtgctgactgcacaagatatggatcccatc
aagctggttgtcttcctgccagccctgtgttgtaaaatgggggtcccttactgtgttatc
aaagagaaggcaaggccgggaagtttagtccacaggaggacctgcatcattgtcaccttc
acacaggttaaatggaaaaaacaaggagctttagctaaactttgggagcttcaggatcaa
ttacaatga

>gi568815587r:82882168_83097316|GENSCAN_predicted_peptide_6|197_aa
MAGCRSRALPRGEAAKARRKIERSAAQGAGSGLGQPREGLPWCSGGLKGSSSAARMDGEA
EEAPRASDAARAASMLSPLNMILIDYKGAKAEEMKPSRETTGKLQVRKGDLYHRNLQREG
TKSEQREDPEAELKEEKAGNPAWSTVHWTLFLAHNGSRGMVLEVLATAIRQEKERKGIQI
GREEVKLSLFADDMILI

>gi568815587r:82882168_83097316|GENSCAN_predicted_CDS_6|594_bp
atggcgggctgccgctcccgagccctaccccgcggggaggcagctaaggcccggcgaaaa
atcgagcgcagcgccgcccagggagccggctccggcctcggccagcccagagaagggctc
ccatggtgcagcggcgggctgaagggctcctcaagcgcggccagaatggacggcgaggcc
gaggaggcaccgagagcgagcgacgctgcgcgggctgccagcatgctgtcacctctcaat
atgatcttaatagattataaaggggcaaaggcagaagaaatgaaaccatctagggagact
actggtaaactgcaggtgagaaaaggtgacttgtaccataggaatcttcagagggaaggc
accaagagtgaacagagggaagacccagaagctgagctgaaggaggagaaagctgggaac
cctgcatggtctactgtgcactggaccttgttcctggcccacaatggctccagaggaatg
gtattggaagtcctggccacggcaatcaggcaagagaaagaaagaaagggcatccaaata
ggaagagaggaagtcaaactatccctgtttgcagatgacatgattctaatctag

>gi568815587r:82882168_83097316|GENSCAN_predicted_peptide_7|244_aa
MSMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKL
QIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLV
DYRRPRVASCSLRRTQDRKYSLTADQHPATLFSGSNPSSSPRNKIDLAERREVSQQRAEE
FSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSPLPGEGKSISYLTC
CNFN

>gi568815587r:82882168_83097316|GENSCAN_predicted_CDS_7|735_bp
atgagtatggaagattatgatttcctgttcaaaattgttttaattggcaacgctggtgtg
gggaagacgtgcctcgtccgaagattcactcagggtcttttccccccaggtcaaggagcc
acaattggagttgattttatgattaagacagtggagattaatggtgaaaaagtaaagcta
cagatctgggacacagcaggtcaagagagatttcggtccattacccagagttactaccga
agcgccaatgccttgatcctcacctatgacattacctgtgaggaatccttccgttgcctt
cctgagtggctgcgggagatagaacaatatgccagcaacaaggtcatcactgtgttagtg
gactaccgtagaccacgcgtggcatcgtgttcacttagaaggacacaggacaggaaatac
agcttgacagcagatcagcatccggcaaccctcttcagtggaagtaatcccagtagcagt
ccacgcaacaagattgacctggctgaaaggagagaggtttcccagcagcgagctgaagaa
ttctcagaagctcaggacatgtattatctggagacctcagccaaggaatctgataatgtg
gagaaactcttccttgacttagcatgccgactcatcagtgaagccagacagaacacactt
gtgaacaatgtatcctcacccttacctggagaagggaaaagcatcagctatttgacttgt
tgtaatttcaactaa

>gi568815587r:82882168_83097316|GENSCAN_predicted_peptide_8|105_aa
MAPLSEVGKIGKTEIGVELNQESSFGHVRKYFYYCIFTQMSFMCAHLAGVLLAAGPSMVA
LSCSERVGGEDGDMEKSQCNVMSEEERRAVALQEAQTWELPDPGL

>gi568815587r:82882168_83097316|GENSCAN_predicted_CDS_8|318_bp
atggcaccactttctgaagttgggaagattgggaaaactgagattggagtggagctgaat
caagagtcctcttttggccatgttaggaaatacttctattattgcattttcactcaaatg
tcatttatgtgtgcacatctggctggggtcctactagctgcaggaccctcaatggttgcc
ctttcatgttcagaaagagttggaggggaggatggggacatggaaaaatcacagtgcaat
gttatgagtgaagaggagagacgagctgtggccctccaggaagcccagacctgggagctc
cctgatccagggctgtga

>gi568815587r:82882168_83097316|GENSCAN_predicted_peptide_9|57_aa
MALSGCTPPFLDALPFSLLEHLCYDIPEDIQERQLIIYQYLQRVRLNKWNHYHIQEN

>gi568815587r:82882168_83097316|GENSCAN_predicted_CDS_9|174_bp
atggccctgagtggctgtactccacccttcttagatgctctgcccttctccctgctggag
catctttgctatgacattcctgaagacattcaggaacgccagctgatcatataccaatat
ctacaacgtgtcaggttaaacaaatggaatcattatcacatccaagaaaactaa

>gi568815587r:82882168_83097316|GENSCAN_predicted_peptide_10|98_aa
XHWTPKFFSFQTQTLALSFPQACSQPTVGPCDRLKNGEGSVGPHATPSGAETEAHWASGC
RFQSVPPYISPQHGLHPLVPRFVPAAIRPDRPPPHRPH

>gi568815587r:82882168_83097316|GENSCAN_predicted_CDS_10|297_bp
nnacactggacccccaagttcttcagttttcagactcagactctggctctctcttttcct
caagcttgcagccagcctactgtgggaccttgtgatcgtctaaaaaatggagaaggaagc
gtagggccccatgcaaccccttcaggagctgagaccgaggctcactgggcctctggatgc
cgcttccagtcggtcccgccctacatcagtccccagcatggcctccaccctctggttccc
aggttcgtgcccgcggctatccgaccagatcgtcctccacctcaccgtccccactga