GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:04:42

Sequence gi568815581r:38750135_38953107 : 202973 bp : 48.75% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3016   3200  185  0  2  112   84   312 0.975  31.79
 1.02 Intr +   5749   5856  108  1  0  115  113   166 0.999  21.20
 1.03 Intr +  10297  10474  178  1  1  110   88   197 0.998  21.82
 1.04 Intr +  12277  12371   95  0  2   50   84    91 0.787   3.66
 1.05 Term +  13985  14033   49  2  1   98   40    88 0.750   1.78
 1.06 PlyA +  14071  14076    6                               1.05

 2.11 PlyA -  14309  14304    6                               1.05
 2.10 Term -  19637  19557   81  2  0   87   32   164 0.869   8.39
 2.09 Intr -  20405  20302  104  0  2  139   84   126 0.995  17.19
 2.08 Intr -  21138  20880  259  0  1   78  106   397 0.990  37.54
 2.07 Intr -  27666  27553  114  0  0  108   65   175 0.993  17.84
 2.06 Intr -  28238  28200   39  2  0  128   91    31 0.983   5.82
 2.05 Intr -  29395  29249  147  1  0  102   98   196 0.997  22.43
 2.04 Intr -  30470  30318  153  2  0   65   80   273 0.995  24.47
 2.03 Intr -  34205  34109   97  1  1   81   80   103 0.921   8.81
 2.02 Intr -  36786  36689   98  0  2  116   97   164 0.995  18.91
 2.01 Init -  49290  49132  159  0  0   70   43   236 0.688  17.43
 2.00 Prom -  50053  50014   40                              -4.46

 3.19 PlyA -  50341  50336    6                               1.05
 3.18 Term -  52072  51958  115  0  1   96   48    80 0.959   2.84
 3.17 Intr -  52727  52566  162  1  0   70   81   231 0.943  19.69
 3.16 Intr -  56261  56163   99  1  0   79  109    18 0.754   2.23
 3.15 Intr -  60461  60334  128  2  2   51   83   150 0.998  10.28
 3.14 Intr -  62730  62661   70  2  1   81  111    84 0.999   9.18
 3.13 Intr -  64963  64727  237  0  0   55   79   232 0.983  15.73
 3.12 Intr -  70939  70767  173  1  2   93  108   313 0.983  32.54
 3.11 Intr -  71098  71018   81  1  0   98   59    51 0.891   3.03
 3.10 Intr -  75384  75219  166  2  1   28   81   174 0.504  10.66
 3.09 Intr -  85212  85137   76  1  1  100   42    60 0.024   1.17
 3.08 Intr -  85359  85257  103  0  1   43   64    39 0.286  -3.25
 3.07 Intr -  91284  91049  236  1  2   47   80   256 0.428  18.11
 3.06 Intr - 100341 100228  114  1  0  129   97    87 0.997  14.12
 3.05 Intr - 102598 102470  129  2  0   77   96   154 0.999  15.77
 3.04 Intr - 102971 102888   84  0  0  109   94    15 0.932   3.99
 3.03 Intr - 103801 103661  141  2  0   47   66    76 0.417   1.62
 3.02 Intr - 104632 104596   37  1  1   38   75     4 0.404  -8.06
 3.01 Init - 105181 105128   54  1  0   85  101    82 0.614   8.87
 3.00 Prom - 107785 107746   40                              -8.76

 4.00 Prom + 108316 108355   40                              -8.16
 4.01 Init + 114638 114761  124  1  1   76   99    16 0.818   1.83
 4.02 Intr + 119242 119386  145  2  1   89   50   157 0.988  11.34
 4.03 Intr + 119902 120124  223  1  1   80  105   148 0.956  13.83
 4.04 Intr + 127952 128046   95  1  2   94   77   211 0.879  19.36
 4.05 Intr + 137390 137587  198  2  0   68  100    82 0.756   5.87
 4.06 Intr + 140286 140370   85  0  1  125   94   104 0.997  14.52
 4.07 Intr + 142934 143134  201  1  0   74    0   155 0.291   4.78
 4.08 Intr + 148278 148385  108  2  0  153   66   199 0.913  24.68
 4.09 Intr + 158603 158656   54  1  0  106   37    48 0.217   0.68
 4.10 Intr + 164191 164341  151  0  1  100  100   256 0.998  27.74
 4.11 Intr + 164909 165012  104  0  2   78   84   157 0.984  14.19
 4.12 Intr + 168377 168424   48  1  0   86   99    17 0.574   1.48
 4.13 Term + 168471 168644  174  2  0   77   46   573 0.995  49.76
 4.14 PlyA + 171610 171615    6                               1.05

 5.06 PlyA - 174395 174390    6                               1.05
 5.05 Term - 175660 175506  155  2  2   41   53   137 0.257   3.58
 5.04 Intr - 188598 188439  160  0  1   36  105    69 0.838   2.96
 5.03 Intr - 192786 192644  143  1  2   47  111    12 0.506  -0.53
 5.02 Intr - 193602 193456  147  1  0   79   98    82 0.973   8.51
 5.01 Intr - 201555 201447  109  0  1   84   98    61 0.896   6.56

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:38750135_38953107|GENSCAN_predicted_peptide_1|204_aa
SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ
TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFI
CSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAVS
GMGVIVHIIEKDKITTRTLKARMD

>gi568815581r:38750135_38953107|GENSCAN_predicted_CDS_1|615_bp
tctattatgtcctataacggaggggccgtcatggccatgaaggggaagaactgtgtggcc
atcgctgcagacaggcgcttcgggatccaggcccagatggtgaccacggacttccagaag
atctttcccatgggtgaccggctgtacatcggtctggccgggctcgccactgacgtccag
acagttgcccagcgcctcaagttccggctgaacctgtatgagttgaaggaaggtcggcag
atcaaaccttataccctcatgagcatggtggccaacctcttgtatgagaaacggtttggc
ccttactacactgagccagtcattgccgggttggacccgaagacctttaagcccttcatt
tgctctctagacctcatcggctgccccatggtgactgatgactttgtggtcagtggcacc
tgcgccgaacaaatgtacggaatgtgtgagtccctctgggagcccaacatggatccggat
cacctgtttgaaaccatctcccaagccatgctgaatgctgtggaccgggatgcagtgtca
ggcatgggagtcattgtccacatcatcgagaaggacaaaatcaccaccaggacactgaag
gcccgaatggactaa

>gi568815581r:38750135_38953107|GENSCAN_predicted_peptide_2|416_aa
MSSNCTSTTAVAVAPLSASKTKTKKKHFVCQKVKLFRASEPILSVLMWGVNHTINELSNV
PVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNS
VTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLL
PQFLGMYRLTVDGVETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKD
NDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQEEMEVEE
RAEDEECENDGVGGNLLCSYGTPPDSPGNLLSFPRFFGPGEFDPSVDVYAMKSHESSPKK
EVYFMAIIDILTPYDTKKKAAHAAKTVKHGAGAEISTVNPEQYSKRFNEFMSNILT

>gi568815581r:38750135_38953107|GENSCAN_predicted_CDS_2|1251_bp
atgtcgtccaactgcaccagcaccacggcggtggcggtggcgccgctcagcgccagcaag
accaagaccaagaagaagcatttcgtgtgccagaaagtgaagctattccgggccagcgag
ccgatcctcagcgtcctgatgtggggggtgaaccacacgatcaatgagctgagcaatgtt
cctgttcctgtcatgctaatgccagatgacttcaaagcctacagcaagatcaaggtggac
aatcatctcttcaataaggagaacctgcccagccgctttaagtttaaggagtattgcccc
atggtgttccgaaaccttcgggagaggtttggaattgatgatcaggattaccagaattca
gtgacgcgcagcgcccccatcaacagtgacagccagggtcggtgtggcacgcgtttcctc
accacctacgaccggcgctttgtcatcaagactgtgtccagcgaggacgtggcggagatg
cacaacatcttaaagaaataccaccagtttatagtggagtgtcatggcaacacgcttttg
ccacagttcctgggcatgtaccgcctgaccgtggatggtgtggaaacctacatggtggtt
accaggaacgtgttcagccatcggctcactgtgcatcgcaagtatgacctcaagggttct
acggttgccagagaagcgagcgacaaggagaaggccaaggacttgccaacattcaaagac
aatgacttcctcaatgaagggcagaagctgcatgtgggagaggagagtaaaaagaacttc
ctggagaaactgaagcgggacgttgagttcttggcacagctgaagatcatggactacagc
ctgctggtgggcatccacgacgtggaccgggcagagcaggaggagatggaggtggaggag
cgggcagaggacgaggagtgtgagaatgatggggtgggtggcaacctactctgctcctat
ggcacacctccggacagccctggcaacctcctcagctttcctcggttctttggtcctggg
gaattcgacccctctgttgacgtctatgccatgaaaagccatgaaagttcccccaagaag
gaggtgtatttcatggccatcattgatatcctcacgccatacgatacaaagaagaaagct
gcacatgctgccaaaacggtgaaacacggggcaggggccgagatctcgactgtgaaccct
gagcagtactccaaacgcttcaacgagtttatgtccaacatcctgacgtag

>gi568815581r:38750135_38953107|GENSCAN_predicted_peptide_3|734_aa
MAAARLPERLVPRRGRTACLISSSTCTPAESRREDTSYLLRFYLNSHFAERAKSDVVNLL
RNKAAPRGGRGRFLLRPRRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKG
RLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVN
NKGEMKERPSEATVVGMAYLSECRLRLEKGFILDGVAVSTAARAYGRSRPKLWSAIPPYN
AQQDYHARSYFQSHVVPPLLRKTDQSLRTLVDCVFSMGNASDYAWLASHTTPRGMGKPRG
HSLQQVTGHDHYNADLKPIDGFNGRESGTSGNVATRSSQNETSTAKASTAEPGPLQNLQV
TPTSQSATEPCTSSFRDADAMCERLLEENLAIVEDILPSHACLGYGRNLKKSWHPQTLRN
VEKVWKAEQKHEAERKKIEELQRELREERAREEMQRYAEDVGAVKKKEEKLDWMYQGPGG
MVNRDEYLLGRPIDKYVFEKMEEKEAGCSSETGLLPGSIFAPSGANSLLDMASKIREDPL
FIIRKKEEEKKREVLNNPVKMKKIKELLQMSLEKKEKKKKKEKKKKHKKHKHRSSSSDRS
SSEDEHSAGRHNSKVNRRETGQTRSPSPKKEVYQRRHAPGYTRKLSAEELERKRQEMMEN
AKWREEERLNILKRHAKDEEREQRLEKLDSRDGKFIHRMKLESASTSSLEDRVKRNIYSL
QRTSVALEKNFMKR

>gi568815581r:38750135_38953107|GENSCAN_predicted_CDS_3|2205_bp
atggctgctgcgcggcttcctgagcgactggttcctcggcgagggcgaacagcgtgtcta
atatcctcctccacctgcaccccagcagaatctcgtagagaagatacttcctatctcttg
cgcttctacctcaactcccacttcgcagagagggctaaaagcgacgtcgtaaacttatta
cgtaataaggcagcgcccagaggcggaagaggccggtttttgctccggccacgacgtggt
gggtcctctggtgcgaaattccggatttccttgggtcttccggtaggagctgtaatcaat
tgtgctgacaacacaggagccaaaaacctgtatatcatctccgtgaaggggatcaaggga
cggctgaacagacttcccgctgctggtgtgggtgacatggtgatggccacagtcaagaaa
ggcaaaccagagctcagaaaaaaggtacatccagcagtggtcattcgacaacgaaagtca
taccgtagaaaagatggcgtgtttctttattttgaagataatgcaggagtcatagtgaac
aataaaggcgagatgaaagaaaggccctccgaggctacggtggttgggatggcgtacctg
agcgagtgtcgcctgcgactggagaaaggctttatcttggacggggtggctgtgagcacc
gctgcccgcgcttatgggcgctctaggcccaagctgtggtcggcgattccgccctacaac
gcgcagcaggactaccacgcccgcagctacttccagagtcacgtggttccgccccttttg
cggaaaactgatcagagtctcaggacacttgtggattgcgtgttcagcatggggaatgca
agtgactacgcctggttggcatcccataccacacccaggggaatggggaagccaagaggg
cattctctccagcaggtgactgggcatgaccactacaatgctgatctgaaaccgatcgat
gggttcaatggaagagagtctgggacatcaggcaacgtggcgacccgaagcagccaaaat
gagacctcgacagcaaaggcctcgacagcggagcccggacctttgcaaaatctgcaagta
acgccaacgtcacaaagcgcgaccgagccctgtacgtcatcgttccgcgacgccgacgcg
atgtgtgagagattattggaagaaaaccttgccattgttgaagacatcttgccctcacac
gcctgccttgggtatggaaggaatctgaagaagagctggcacccgcagaccctcaggaat
gtggagaaagtgtggaaggccgagcagaagcatgaggctgagcggaagaagattgaggag
cttcagcgggagctgcgagaagagagagcccgggaagagatgcagcgctatgcggaggat
gttggggccgtcaagaaaaaagaagaaaagttggactggatgtaccagggtcctggtggg
atggtgaaccgtgacgagtacctgctggggcgccccattgacaaatatgtttttgagaag
atggaggagaaggaggcaggctgctcttctgaaacaggacttctcccaggctctatcttt
gccccatcaggtgccaattcccttcttgacatggccagcaagatccgggaggacccactc
ttcatcatcaggaagaaggaggaggagaaaaaacgagaggtattaaataatccagtgaaa
atgaagaaaatcaaagaattgttgcaaatgagtctggaaaaaaaggagaagaagaaaaag
aaggagaagaaaaagaagcacaagaaacataagcacagaagctcgagtagtgatcgttcc
agcagcgaggatgagcacagtgcagggaggcacaactctaaggtgaacaggagagagaca
ggccaaactaggagcccatcacctaaaaaagaggtctaccaaaggcgacatgctcccgga
tacaccagaaaactctctgcagaggaattagagcgaaaacggcaagagatgatggaaaac
gccaaatggagggaggaggagagactgaacatcctcaagaggcatgctaaggatgaggaa
cgggagcagaggctagagaagctggactcccgggatgggaagttcatccaccgcatgaag
ctggagagtgcatctacttcctccctggaggatcgggtgaagcggaatatctactcttta
cagagaacttcggtagctctggagaagaactttatgaaaagatga

>gi568815581r:38750135_38953107|GENSCAN_predicted_peptide_4|569_aa
MSTSQSPCESICDYVTSHDKSNFTDMIKLNILRCEVILDYPAPGGGSLGAKHCCSCYTVS
SGVTEGERNAGEKGVKLNADGARIRGTPGRGRRAEAEASSPAPAAVAAACVVAAAAASRQ
LASGNRTRVSSGVPAPAFLGTMNPNCARCGKIVYPTEKVNCLDKFWHKACFHCETCKMTL
NMKNYKGYEKKPYCNAPRLLPAADTCVCLSSSSLPLLEELRVWADLGGQDPGEGWGTGTA
RIIWIRDSETGPREKGFAKVTQHYPKQSFTMVADTPENLRLKQQSELQSQPPDERGALII
PIIQIGKLRFTEAALLVQSPGTGADIKSHDLALEPVALNSADGTGTEPCAPTLQDAPVRY
KEEFEKNKGKGFSVVADTPELQRIKKTQDQISNPGLQELLAVQPAGAATMQIKYHEEFEK
SRMGPSGGEGMEPERRDSQDGSSYRRPLEQQQPHHIPTSAPVYQQPQQQPVAQSYGGYKE
PAAPVSIQRSAPGGGGALLQGRGELEKNAQTQKRYRAVYDYSAADEDEVSFQDGDTIVNV
QQIDDGWMYGTVERTGDTGMLPANYVEAI

>gi568815581r:38750135_38953107|GENSCAN_predicted_CDS_4|1710_bp
atgtctacatcccagtctccttgtgaatctatttgtgactatgttacctctcatgataaa
agcaactttacagatatgattaaattaaatatcttgagatgtgaggttatcctggattat
ccagcgcctggaggcggctccttgggtgctaagcattgttgcagctgctacactgtgagt
agtggtgtaacagaaggagaaaggaatgctggagaaaaaggggtcaagctgaacgcagac
ggtgcccgcatccggggaaccccgggaaggggaaggagggcggaggcggaggccagttcc
ccagctccagccgccgtcgctgctgcctgtgtagttgcagccgcggccgcctcccgccag
ctcgcctcggggaacaggacgcgcgtgagctcaggcgtccccgccccagcttttctcgga
accatgaaccccaactgcgcccggtgcggcaagatcgtgtatcccacggagaaggtgaac
tgtctggataagttctggcataaagcatgcttccattgcgagacctgcaagatgacactg
aacatgaagaactacaagggctacgagaagaagccctactgcaacgcgccacgtctgttg
ccagctgcggacacctgtgtttgcctttcctcatcttcccttcctctgctggaggaactg
cgagtctgggctgacctgggtggccaggacccaggtgagggctgggggacgggcaccgct
aggatcatctggatccgggacagtgaaactggcccaagggaaaaaggatttgccaaggtc
acccaacactaccccaagcagtccttcaccatggtggcggacaccccggaaaaccttcgc
ctcaagcaacagagtgagctccagagtcagccacctgatgaaagaggggctcttattatc
cccatcatacagatagggaaactgaggtttacagaggctgccctgcttgtgcagagccca
gggacaggggcagacatcaagtcccatgacctggccctggagcccgttgctctgaacagt
gctgatggcacaggcaccgagccctgtgctcccaccctgcaggatgcaccagtgcgctac
aaggaggagtttgagaagaacaagggcaaaggtttcagcgtagtggcagacacgcccgag
ctccagagaatcaagaagacccaggaccagatcagtaaccccgggctgcaggaactattg
gctgttcagccagcaggagcagcaaccatgcagataaaataccatgaggagtttgagaag
agccgcatgggccctagcgggggcgagggcatggagccagagcgtcgggattcacaggac
ggcagcagctaccggcggcccctggagcagcagcagcctcaccacatcccgaccagtgcc
ccggtttaccagcagccccagcagcagccggtggcccagtcctatggtggctacaaggag
cctgcagccccagtctccatacagcgcagcgccccaggtggtggcggggctctgctccag
ggtcgtggagagttagaaaaaaatgctcagacccagaagcggtaccgcgcggtgtatgac
tacagcgccgccgacgaggacgaggtctccttccaggacggggacaccatcgtcaacgtg
cagcagatcgacgacggctggatgtacgggacggtggagcgcaccggcgacacggggatg
ctgccggccaactacgtggaggccatctga

>gi568815581r:38750135_38953107|GENSCAN_predicted_peptide_5|237_aa
TLTAGWDELECHRVYNFLCELTNLCRKIQMAVCSKPGQVVWQEMIEEPTDEFSLKGLADA
IKLLYDASTKEWTADDVISLVDELSVVPREWLLENNARLLMLSGNNICFSFMASKAVNGR
TIELARLVVFLALVCEKELYCMDWTVKMMQKVCKVFSTPVERKNFLQNVANAFACVIMEM
LQSIMSGSGRSSRPLEQIDNVGQNDQAYDGKEHQDENIQHCGFLGRPSPWILVNREL

>gi568815581r:38750135_38953107|GENSCAN_predicted_CDS_5|714_bp
accttaacagcaggttgggatgaacttgagtgccatcgcgtttataatttcttatgcgaa
ctgactaatctctgccgcaagatacaaatggctgtctgcagcaaaccaggacaggtggtt
tggcaggaaatgatagaagaacctacagatgaattcagtctgaaaggtttggctgatgcc
attaagttactatatgacgctagcactaaagagtggacagcagatgatgttatcagtctt
gtagatgaactatcagtggttccccgtgagtggcttctagagaataatgcacgtctccta
atgctaagtggaaacaacatctgtttcagtttcatggctagtaaagctgtgaatggacgc
accattgaactggcaaggctcgtagtctttttggctttggtgtgtgagaaagaactgtac
tgcatggattggacagttaaaatgatgcaaaaagtctgcaaagtctttagcactccagtg
gaaagaaagaacttcctgcagaatgtggcaaatgcatttgcatgtgttataatggaaatg
ctgcaatcaattatgtctggctccggccgcagctccaggccactagagcagatagataat
gtaggacagaatgaccaggcctatgatggcaaagaacatcaggatgaaaatatccagcat
tgtggattcctaggccgaccaagcccctggattctggtgaaccgtgagctgtga