GENSCAN 1.0	Date run:  5-Nov-116	Time: 20:19:05

Sequence gi568815597f:40440583_40647457 : 206875 bp : 43.09% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   9274   9555  282  0  0   82   44   214 0.532  13.45
 1.02 Intr +  10074  10207  134  2  2   66   40    80 0.458   0.44
 1.03 Intr +  10349  10506  158  2  2  -65  116   218 0.595   8.95
 1.04 Intr +  13621  13706   86  2  2  109   94    63 0.785   8.54
 1.05 Intr +  16363  16489  127  0  1   25   82   175 0.779  10.85
 1.06 Intr +  16762  16857   96  2  0   53  111    32 0.553   1.98
 1.07 Term +  21839  23007 1169  0  2   62   44   472 0.375  32.20
 1.08 PlyA +  24035  24040    6                               1.05

 2.00 Prom +  37171  37210   40                               0.24
 2.01 Init +  38780  38906  127  1  1   86  100   132 0.986  13.73
 2.02 Intr +  41181  41272   92  1  2   96  109    97 0.999  12.31
 2.03 Intr +  48506  48632  127  1  1   56   86   113 0.901   8.15
 2.04 Term +  54339  55477 1139  1  2  102   42   571 0.959  46.03
 2.05 PlyA +  55603  55608    6                               1.05

 3.00 Prom +  64242  64281   40                              -4.26
 3.01 Init +  73963  75016 1054  0  1   72   59   573 0.015  47.17
 3.02 Intr +  92561  92599   39  0  0   79  110    35 0.058   3.00
 3.03 Intr +  93144  93226   83  1  2   57   39    48 0.036  -3.84
 3.04 Intr + 100004 100130  127  1  1   60   82    76 0.504   4.45
 3.05 Intr + 101033 101128   96  0  0   95  109    34 0.557   6.18
 3.06 Term + 105980 106878  899  0  2   62   34   473 0.435  31.84
 3.07 PlyA + 107034 107039    6                               1.05

 4.00 Prom + 107066 107105   40                              -4.76
 4.01 Init + 108843 108949  107  2  2   77   78    87 0.356   6.29
 4.02 Intr + 110616 110643   28  0  1   63   73    24 0.159  -3.48
 4.03 Intr + 117013 117237  225  0  0   49   39   174 0.235   6.78
 4.04 Intr + 122867 123077  211  1  1   56   68   116 0.400   4.89
 4.05 Term + 124801 124895   95  2  2  105   47    18 0.303  -2.61
 4.06 PlyA + 125232 125237    6                               1.05

 5.02 PlyA - 126501 126496    6                               1.05
 5.01 Sngl - 153419 153141  279  2  0   33   42   235 0.295   8.83
 5.00 Prom - 158518 158479   40                              -0.46

 6.11 PlyA - 158635 158630    6                               1.05
 6.10 Term - 165330 165231  100  2  1   55   36    74 0.425  -3.50
 6.09 Intr - 169852 169729  124  2  1  101   75    87 0.841   8.34
 6.08 Intr - 179837 179780   58  2  1  116  116    60 0.931  10.06
 6.07 Intr - 185126 184976  151  1  1   69   99    22 0.841   1.56
 6.06 Intr - 186147 186044  104  0  2  125   47   269 0.957  25.47
 6.05 Intr - 188367 188228  140  1  2  109   94   236 0.978  26.48
 6.04 Intr - 188790 188689  102  1  0  130   94   127 0.758  17.65
 6.03 Intr - 192599 192487  113  1  2  142   92    43 0.997  10.12
 6.02 Intr - 195475 195334  142  2  1    5   56   286 0.996  16.51
 6.01 Init - 201343 201127  217  1  1   72   81   120 0.540   8.56

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  73963  75084 1122  0  0   72   42   579 0.922  48.40


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:40440583_40647457|GENSCAN_predicted_peptide_1|683_aa
MVVLHQSLGPKNAGSISSRRSQADDARRDRILGAPERSQPGAHRWGRLRWRSGSPGGRWE
PCSSQPLRRRTGPRLPAAALRGSLAAQCRNPAAAHLQGLLRVNTWRLQLLAKETDGAQVG
RYALRADDRHKSRSRILILGSSERSADAVMLQQLLITLPTEASTWVKLRHPKAATERVAL
WEDVTKMFKAEALLSQDADETQGESLESRVTLGSLTAESQELLTFKDVSVDFTQEEWGQL
APAHRNLYREVMLENYGNLVSVGCQLSKPGVISQLEKGEEPWLMERDISGVPSSDLKSKT
KTKESALQNDISWEELHCGLMMERFTKGSSMYSTLGRISKCNKLESQQENQRMGKGQIPL
MCKKTFTQERGQESNRFEKRINVKSEVMPGPIGLPRKRDRKYDTPGKRSRYNIDLVNHSR
SYTKMKTFECNICEKIFKQLIHLTEHMRIHTGEKPFRCKECGKAFSQSSSLIPHQRIHTG
EKPYECKECGKTFRHPSSLTQHVRIHTGEKPYECRVCEKAFSQSIGLIQHLRTHVREKPF
TCKDCGKAFFQIRHLRQHEIIHTGVKPYICNVCSKTFSHSTYLTQHQRTHTGERPYKCKE
CGKAFSQRIHLSIHQRVHTGVKPYECSHCGKAFRHDSSFAKHQRIHTGEKPYDCNECGKA
FSCSSSLIRHCKTHLRNTFSNVV

>gi568815597f:40440583_40647457|GENSCAN_predicted_CDS_1|2052_bp
atggttgttcttcatcagagtctggggcccaagaacgcaggctccatctcctcccgcagg
agccaggctgatgatgctcgcagggatcggatactgggagcccctgaacgcagccaaccc
ggcgcgcaccggtgggggcgtctgcgctggcggagcggctccccgggaggacgctgggaa
ccatgctctagccagccgctgcgcaggcgcactgggccccgactgcccgccgcagcgcta
cgtgggagcttggccgcgcagtgccggaacccggctgcagcgcatctgcaggggctgctg
agagtaaatacttggcgcctccagctgctggccaaggagacagatggagctcaagttggg
agatacgccctgagagccgatgatagacacaagtccagatctcggattttgatactaggg
tcctcagaaaggagtgcggacgccgtcatgctgcagcagctcctgatcaccctgcccacc
gaggccagcacctgggtgaagttgcgtcatccaaaggcggccacggagcgggtggccctg
tgggaggatgtgactaagatgtttaaagcagaagctctgctgtctcaggatgctgatgag
acccagggcgaaagtttagagagtagagtgacccttggatccctgacagcagaatcccag
gaactgttaaccttcaaggacgtatctgtggacttcactcaggaggagtgggggcagctg
gcccctgctcaccggaatctgtaccgggaggtgatgctggagaactatgggaacctggtc
tcagtgggatgtcagctttccaaacctggcgtgatttcccagttggagaaaggagaagaa
ccatggctgatggagagagatatttcaggagttccaagttcagacttgaagagcaaaaca
aaaaccaaagagtcagccttacagaatgatatttcgtgggaagaactacattgtggccta
atgatggaaagatttacaaaaggaagcagcatgtattccaccttgggaagaatctccaaa
tgtaataagctagaaagccaacaagagaaccaaagaatgggtaaggggcaaatccccctg
atgtgcaagaaaacattcactcaggagagaggccaagagtctaatagatttgagaaaaga
attaatgtgaagtcagaagttatgccaggaccaataggtcttccaagaaaaagagatcgt
aaatatgacacacctggaaagagaagcagatacaacatagatttagttaatcattcaagg
agttatacaaaaatgaaaacctttgagtgtaatatttgtgaaaaaatcttcaaacagctt
attcaccttactgaacacatgagaattcataccggggagaaacctttcagatgtaaggaa
tgtggaaaagcctttagccaaagttcatctcttattccgcatcagagaattcatactggt
gagaaaccctatgaatgtaaggagtgtgggaaaaccttcagacatccttcatcgcttact
caacatgttagaattcataccggggaaaagccctatgaatgtagggtatgtgagaaagcc
ttcagccagagcattggactgatccagcatttgagaactcatgttagagagaaacctttt
acatgcaaagactgtggaaaagcgtttttccagattagacaccttaggcaacatgagatt
attcatactggtgtgaaaccctatatttgtaatgtatgtagtaaaaccttcagccatagt
acatacctaactcaacaccagagaactcatactggagaaagaccatataaatgtaaggaa
tgtgggaaagcctttagccagagaatacatctttctatccatcagagagtccatactgga
gtaaaaccttatgaatgcagtcattgtgggaaagcctttaggcatgattcatcctttgct
aaacatcagagaattcatactggagaaaaaccttatgattgtaatgagtgtggaaaagcc
ttcagctgtagttcatcccttattagacactgcaaaacacatttaagaaataccttcagc
aatgttgtgtga

>gi568815597f:40440583_40647457|GENSCAN_predicted_peptide_2|494_aa
MPQQLLITLPTEASTWVKLQHPKKAVEGAPLWEDVTKMFEGEALLSQDAEDVKTQRESLE
DEVTPGLPTAESQELLTFKDISIDFTQEEWGQLAPAHQNLYREVMLENYSNLVSVDLKSK
IETIESTAKSTISQERLYHGIMMESFMRDDIIYSTLRKVSTYDDVLERHQETCMRDVRQA
ILTHKKRVQETNKFGENIIVHSNVIIEQRHHKYDTPTKRNTYKLDLINHPTSYIRTKTYE
CNICEKIFKQPIHLTEHMRIHTGEKPFRCKECGRAFSQSASLSTHQRIHTGEKPFECEEC
GKAFRHRSSLNQHHRTHTGEKPYVCDKCQKAFSQNISLVQHLRTHSGEKPFTCNECGKTF
RQIRHLSEHIRIHTGEKPYACTACCKTFSHRAYLTHHQRIHTGERPYKCKECGKAFRQRI
HLSNHKTVHTGVKAYECNRCGKAYRHDSSFKKHQRHHTGEKPYECNECGKAFSYNSSLSR
HHEIHRRNAFRNKV

>gi568815597f:40440583_40647457|GENSCAN_predicted_CDS_2|1485_bp
atgccacagcagctcctgatcaccctgcctaccgaggccagcacctgggtgaagctgcaa
catccaaagaaggccgtggagggggcgcccctgtgggaggatgtgactaaaatgtttgaa
ggagaagctctgctgtctcaggatgctgaggacgtaaagacccagagagaaagtttagag
gatgaagtgacccctggactcccgacagcagaatcccaggaattgttgactttcaaggac
atatctattgacttcacccaggaagagtgggggcagctggctcctgctcaccagaatcta
taccgagaggtgatgctggagaactacagcaacttggtgtcagtggacttgaagagtaaa
atagaaaccattgagtcaactgcaaagagtaccatttcacaggagcgcttatatcatggc
attatgatggaaagtttcatgagggatgatataatttattccacgttgagaaaagtctcc
acatatgatgatgtcttagaaaggcaccaggaaacttgtatgagagatgtgagacaagcc
atcttgacccataagaagagagtccaagaaactaacaaatttggggaaaatatcattgtg
cattcaaatgttattattgaacagaggcaccataaatatgatacacctacaaagcggaac
acatacaaattagatttgattaatcatccaacaagttacataagaacaaaaacctatgaa
tgtaatatatgtgaaaaaatcttcaaacaacctattcaccttactgaacatatgagaatt
catactggtgagaaacctttcagatgtaaggaatgtggaagggcctttagtcaaagtgca
tccctcagtacacaccagagaatccatactggtgagaaaccctttgaatgtgaggaatgt
gggaaagccttcagacatcgctcatcacttaatcagcatcatagaactcacactggggag
aaaccctatgtatgtgataaatgtcagaaagctttcagccagaacattagcttggttcaa
catttgaggactcattctggagagaaaccttttacttgcaatgaatgtgggaaaaccttt
agacagattagacaccttagtgaacatataagaattcataccggggagaagccctatgca
tgcactgcatgttgtaaaacctttagtcatagagcgtatctaacacatcaccagagaatc
catactggggagagaccctacaaatgtaaagaatgtggaaaagcctttaggcagaggata
caccttagcaaccataaaactgttcatacaggagtgaaagcatatgaatgcaaccgctgt
ggaaaagcctataggcatgattcatcctttaaaaaacatcagagacatcacactggagaa
aaaccttacgaatgtaacgaatgtggaaaagccttcagctataactcttcacttagtcga
catcatgaaatacacaggaggaacgccttccgaaataaggtgtaa

>gi568815597f:40440583_40647457|GENSCAN_predicted_peptide_3|765_aa
MAETREEETVSAEASGFSDLSDSEFLEFLDLEDAQESKALVNMPGPSSESLGKDDKPISL
QNWKRGLDILSPMERFHLKYLYVTDLATQNWCELQTAYGKELPGFLAPEKAAVLDTGASI
HLARELELHDLVTVPVTTKEDAWAIKFLNILLLIPTLQSEGHIREFPVFGEGEGVLLVGV
IDELHYTAKGELELAELKTRRRPMLPLEAQKKKDCFQVSLYKYIFDAMVQGKVTPASLIH
HTKLCLEKPLGPSVLRHAQQGGFSVKSLGDLMELVFLSLTLSDLPVIDILKIEYIHQETA
TVLGTEIVAFKEKEVRAKVQHYMAYWMGHREPQGVDVEEAWKCRTCTYADIYFCVRAAEN
DQLPVSSYPEHLLFYMNFKVIKITNIVKVHKAESVTFQDVAVDFTAEEWQLLDCAERTLY
WDVMLENYRNLISVGCPITKTKVILKVEQGQEPWMVEGANPHESSPESDYPLVDEPGKHR
ESKDNFLKSVLLTFNKILTMERIHHYNMSTSLNPMRKKSYKSFEKCLPPNLDLLKYNRSY
TVENAYECSECGKAFKKKFHFIRHEKNHTRKKPFECNDCGKAYSRKAHLATHQKIHNGER
PFVCNDCGKAFMHKAQLVVHQRLHTGEKPYECSQCGKTFTWNSSFNQHVKSHTLEKSFEC
KECGKTFRYSSSLYKHSRFHTGEKPYQCIICGKAFGNTSVLVTHQRIHTGEKPYSCIECG
KAFIKKSHLLRHQITHTGEKPYECNRCGKAFSQKSNLIVHQKIHT

>gi568815597f:40440583_40647457|GENSCAN_predicted_CDS_3|2298_bp
atggcagagacaagagaagaggagacagtgtcagcagaagcctcagggttctcagacttg
agtgactcagagttcctggagtttctggacctagaagatgcccaagagtcaaaggcttta
gttaacatgcctggcccatcttctgaatcccttgggaaggatgacaaacccataagctta
caaaactggaaaagaggattggatatattatcacccatggagagattccaccttaaatat
ttatatgtcactgacctggctactcagaactggtgtgaactgcaaacagcatatgggaag
gagcttcctggtttcttggcacctgagaaggcagctgtgttggacactggtgccagcata
cacctagctagagaactagaacttcatgatcttgtgactgtcccagtcaccactaaagaa
gatgcttgggcaattaagtttctgaacatacttttgctgattcctaccctgcagtcagaa
gggcacatcagagagtttccagtgtttggggaaggggagggtgtacttcttgttggagtg
attgatgagctgcactatacagccaagggggaactggagctggcggaactcaagacacgc
aggcgccctatgctccctctggaagctcagaagaagaaagactgttttcaagtcagccta
tacaaatatatctttgatgccatggtacaaggaaaagtgacccctgctagcctaatccac
cacacaaagttgtgtctagaaaagccactggggccatcagtgctgaggcatgcccagcag
ggaggcttctctgtgaagtctttgggtgacctcatggaacttgtcttcttgtctctaaca
ctgtcagacctcccagttattgatatcttgaagattgagtatatccaccaagagactgcc
actgtgctgggtactgagattgtagccttcaaagagaaggaggtgagagccaaggtgcag
cattatatggcctactggatgggccaccgagagccccagggagttgacgtggaggaggct
tggaagtgccggacgtgtacctatgcagacatttatttctgtgtaagagctgcagaaaat
gatcagcttccagtctctagctatcctgagcatttactcttctacatgaattttaaggtc
atcaaaataacaaatattgtcaaggttcataaagcagaatcagtgacattccaggatgtg
gctgtggatttcactgcagaggagtggcagctgcttgattgtgctgagagaaccctgtat
tgggatgtgatgttggagaactatagaaacctcatctcagtgggatgtccaattaccaaa
acaaaagtgatcctcaaggtagagcaaggacaagagccatggatggtggagggagcgaat
ccacacgagagctctccagaatctgactacccacttgttgatgaaccagggaagcatcgg
gaaagcaaagacaattttttgaagtcagttttgctcacattcaataaaattctgactatg
gagagaatccaccattataatatgagcacaagtcttaatccaatgagaaaaaaatcatat
aaatcgtttgagaagtgtttgccacctaatttagacttacttaaatataatagaagttat
actgtagaaaacgcttatgaatgcagtgaatgcgggaaagccttcaaaaagaagtttcat
ttcattagacatgaaaaaaatcatacaaggaaaaaaccttttgaatgcaatgactgtgga
aaagcctatagcaggaaggcacaccttgcaactcatcagaaaattcataatggagagaga
ccctttgtgtgcaatgattgtgggaaggcgtttatgcataaagcccaactcgtggtccac
cagagacttcacactggagagaagccttatgagtgcagtcaatgtgggaaaacattcact
tggaactcctcatttaatcaacacgtgaaatctcatacacttgagaagtcatttgaatgt
aaggaatgtgggaaaaccttcaggtatagttcatccctttataaacattccagatttcat
acaggagagaaaccctaccagtgtatcatatgtggcaaagcttttggcaacacatccgtg
cttgttacacaccaaagaattcatacaggagagaaaccttacagttgtattgaatgtggc
aaagccttcatcaagaagtcccatctcctcagacatcagataactcatacaggagagaag
ccctatgaatgtaacagatgtgggaaagcattttcccagaagtcaaatcttattgtacat
cagaaaattcatacataa

>gi568815597f:40440583_40647457|GENSCAN_predicted_peptide_4|221_aa
MPGIFRMNSIGIINEDENLLEKSKFFCLATLEYDILMGMTIIIYRASRVKLQTFTVSVTA
LKAARPELFIPPVGVGVSLTSGEKQQTFVVSVTAHKGTVEPKSVQQQDLLQTAKEQSIHK
CCQVDPVYHMHCCRCLLTEEEFLFIGVLGTCYIQGCGHGLHQRGMGATRLCTKGLYREVM
LEIYGNLVIVGTWMKLETIILSRLSQGQKTKHRMFSLIGGN

>gi568815597f:40440583_40647457|GENSCAN_predicted_CDS_4|666_bp
atgcctggaattttccgtatgaacagcataggcatcattaatgaagatgaaaacttgtta
gaaaagagcaagtttttctgcttagcaactttggaatatgacattttaatgggaatgaca
attatcatctatagggcttcaagagtgaagctgcagaccttcacagtgagtgtgacagct
cttaaggcagcgcgtccggagttgttcattcctcctgttggagtcggcgtctcgctaacc
tcaggagagaagcagcagaccttcgtggtgagtgttacagctcataaaggcactgtggag
ccaaagagtgtgcagcagcaagatttattgcaaacagcaaaagaacaaagcatccacaag
tgttgccaggtggaccctgtgtaccacatgcattgctgtagatgcttgctcaccgaagag
gaattcctgttcattggtgttttaggaacctgttacattcaaggatgtggccatggactt
caccaaagaggaatgggggcaactagactatgcacaaagggcctttacagagaagtgatg
ctggagatctatggcaacctggtcatagtggggacatggatgaagctggaaaccatcatt
ctcagcagactatcgcaaggacaaaaaaccaaacaccgcatgttctcactcataggtggg
aattga

>gi568815597f:40440583_40647457|GENSCAN_predicted_peptide_5|92_aa
MRLKRMQTQESAKPAKTLQKPDKVVTAGYKPVANHQCNIAYEKKKKEEGKRVQADKDHVL
SLLFAAFEKHQCYNIKDVVGITMQPVCASRKS

>gi568815597f:40440583_40647457|GENSCAN_predicted_CDS_5|279_bp
atgagactgaagagaatgcaaacacaggaatctgccaaacctgccaaaaccctgcagaaa
ccggacaaggttgtcacagctggttataaacctgttgctaatcatcagtgtaatattgca
tatgagaagaaaaagaaagaagagggaaagagggtgcaggctgataaagaccacgtttta
tccttgctatttgctgccttcgagaaacaccagtgttacaacataaaggatgtggttggc
atcacaatgcaacctgtgtgtgcctcaaggaaatcttga

>gi568815597f:40440583_40647457|GENSCAN_predicted_peptide_6|416_aa
MFNGEPGPASSGASRNVVRSSSISGEICGSQQAGGGAGTTTAKKRRSSLGAKMVAIVGLT
QWSKSTLQLPQPEGATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSDGT
FIFPTTRLGAESQFSDFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARG
LTPKPGSKSLPATYIKVYLLENGACLAKKKTKMTKKTCDPLYQQALLFDEGPQGKVLQVI
VWGDYGRMDHKCFMGMAQIMLDELDLSAAVTGCLPTPPCRRSSASGPGQAATEGMLSAKA
NSPPEALRVALTPSGLIPGGHDSALKAFYFHRLHKGYPTTEEGGSVQVNQVELECMSGLE
WLKLAGHSGTGRSKFHAGPMAASRAEEKGYSITKPLTLDHSLYFISVSYTEYYYAF

>gi568815597f:40440583_40647457|GENSCAN_predicted_CDS_6|1251_bp
atgtttaacggggagccaggtcctgcctcatctggggcctccaggaatgtggtgcggagc
tccagcattagcggtgaaatctgcggatcccagcaagccgggggcggggctgggaccacc
accgccaagaagcggcggagcagcctgggtgccaagatggtggccatcgtgggcctgact
cagtggagcaagagcacactccagcttccgcagcctgaaggggccaccaagaagctgcgc
agcaacatccgccggagcacggagacaggcatcgcggtggagatgcggagccgggtcaca
cgccagggcagccgggagtccaccgatgggagcaccaacagcaacagctccgacggcacg
ttcatcttccccactacccggctaggggctgaaagccagttcagcgatttcctggatggg
ctgggaccagctcagattgtggggcgacagacactggcaacaccacccatgggagatgtg
cacattgccatcatggaccggagtggccagctggaggtggaagtgattgaagctcggggc
ctgacccccaaaccaggctccaaatccctcccagccacctatatcaaggtttacctgctg
gagaatggggcctgcttggccaagaagaagacaaagatgaccaagaagacctgtgatccc
ctgtaccagcaggctctgctctttgacgagggaccccagggcaaggtgctgcaggtgatc
gtctggggagactatggccgcatggaccacaagtgcttcatgggcatggcccagatcatg
ctggacgagctggacctcagcgccgcggtcaccggctgcctccccactccaccgtgccga
aggagctctgccagtgggcctgggcaggcagccacagagggcatgttatctgctaaagca
aacagtcctcctgaggccctgagggtggccctgaccccctcagggctcattcctggtggg
catgactcggccctcaaagccttctacttccatagactccacaagggatatccaacgaca
gaggaaggagggagcgtgcaagtgaaccaggtggaactggagtgcatgagtggactagag
tggctgaaactggccggccactctggcaccggcaggagcaaattccatgcaggccccatg
gcagcttccagggcagaagagaaaggctatagcattactaagcctctcaccttggaccac
agcctctactttatcagtgtatcctatactgagtattactatgctttttag