GENSCAN 1.0	Date run:  4-Nov-116	Time: 22:02:12

Sequence gi568815590r:108101888_108348702 : 246815 bp : 37.64% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  10930  11099  170  2  2   88   89    99 0.705   8.74
 1.02 Term +  20394  20564  171  2  0   62   45   130 0.402   2.94
 1.03 PlyA +  22435  22440    6                               1.05

 2.00 Prom +  25172  25211   40                              -3.75
 2.01 Init +  26086  26407  322  0  1   -6   83   171 0.564   4.74
 2.02 Intr +  27704  27963  260  0  2   20   81   128 0.525   1.56
 2.03 Term +  28740  28991  252  2  0   55   53   131 0.500   0.95
 2.04 PlyA +  29061  29066    6                              -0.45

 3.03 PlyA -  29094  29089    6                               1.05
 3.02 Term -  30228  29820  409  2  1  111   47   191 0.265  11.00
 3.01 Init -  39797  39733   65  2  2   68  100    28 0.381   2.67
 3.00 Prom -  43681  43642   40                              -6.65

 4.00 Prom +  45483  45522   40                              -5.85
 4.01 Sngl +  48496  48828  333  0  0   58   44   238 0.685  12.17
 4.02 PlyA +  49459  49464    6                               1.05

 5.04 PlyA -  50384  50379    6                              -0.45
 5.03 Term -  51003  50888  116  1  2    7   40   133 0.521  -1.85
 5.02 Intr -  54252  54168   85  0  1   80  111    57 0.940   5.67
 5.01 Init -  56072  55722  351  2  0   79   86   115 0.689   7.61
 5.00 Prom -  56431  56392   40                              -4.95

 6.00 Prom +  57597  57636   40                              -5.95
 6.01 Init +  65762  66113  352  1  1   59   58   169 0.555   8.37
 6.02 Term +  67697  68130  434  0  2   43   41   205 0.558   5.77
 6.03 PlyA +  68217  68222    6                               1.05

 7.00 Prom +  68227  68266   40                              -4.95
 7.01 Init +  68589  68939  351  2  0   58   86   101 0.093   4.11
 7.02 Term +  91822  91959  138  0  0   98   47    83 0.045   2.18
 7.03 PlyA +  92244  92249    6                               1.05

 8.00 Prom +  94058  94097   40                              -4.45
 8.01 Init +  95634  96033  400  2  1   73  -57   308 0.398  11.67
 8.02 Term +  97550  97635   86  0  2   57   47    97 0.377  -0.66
 8.03 PlyA +  98510  98515    6                               1.05

 9.17 PlyA -  99216  99211    6                               1.05
 9.16 Term - 100820 100770   51  2  0   96   41    16 0.507  -5.85
 9.15 Intr - 101230 101096  135  1  0  102   94   107 0.902  12.54
 9.14 Intr - 101616 101514  103  2  1   60   64   100 0.116   4.06
 9.13 Intr - 112829 112720  110  2  2   60   60    45 0.109  -2.94
 9.12 Intr - 114626 114525  102  2  0   92   89    29 0.835   2.85
 9.11 Intr - 115573 115447  127  0  1   81   98   147 0.800  14.76
 9.10 Intr - 123865 123825   41  1  2   52   93    16 0.489  -5.40
 9.09 Intr - 127308 127183  126  0  0   71   82    83 0.948   5.96
 9.08 Intr - 133215 133111  105  0  0   86  119    59 0.657   8.29
 9.07 Intr - 133733 133641   93  2  0   43  105    45 0.359   0.94
 9.06 Intr - 134316 134274   43  2  1   95   78    27 0.817  -0.28
 9.05 Intr - 138188 138071  118  0  1   27   97   140 0.951   7.40
 9.04 Intr - 140026 139912  115  1  1   78  115    95 0.702  10.30
 9.03 Intr - 146902 146726  177  1  0    7   78   162 0.015   6.29
 9.02 Intr - 166535 166359  177  2  0   90   93   161 0.969  15.99
 9.01 Init - 193598 193428  171  2  0   54   95    84 0.233   5.19
 9.00 Prom - 202525 202486   40                              -5.05

10.04 PlyA - 202631 202626    6                               1.05
10.03 Term - 224309 224235   75  2  0  105   52    45 0.105  -0.54
10.02 Intr - 237272 237049  224  0  2   47   39   198 0.295   7.72
10.01 Init - 238175 237962  214  2  1   45   38   182 0.830   7.85

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  81953  82050   98  1  2   95   56    51 0.857   2.43
S.002 Term +  82618  82732  115  1  1   41   51   127 0.855   1.36


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:108101888_108348702|GENSCAN_predicted_peptide_1|113_aa
XTKFSNCKPLALERLVFVYNDAPLRSKVKWNLESSIPSSLSAQTVVSALPPNSLMLQSGP
SAAGLVEFAGGPLQTLFASPAVAAEQQRLLPVPSSGSFIPEGHLPYPSQSSPV

>gi568815590r:108101888_108348702|GENSCAN_predicted_CDS_1|342_bp
ntaaccaagttctctaactgcaaacccctggctttggaaaggctagtctttgtttacaat
gatgcaccattacgcagcaaagtgaaatggaatttggaatcttccatcccttcatctctc
agtgcacaaacagttgtatcagctttgcctccaaattcactcatgctgcagtcaggcccc
tctgctgcaggtctggtggaatttgctggaggtccactccagacgctgtttgcctcaccc
gcagtggctgcagaacagcaaagattgctgcctgttccttcctctggaagcttcattcca
gaggggcacctgccatatcccagccagagctctcctgtatga

>gi568815590r:108101888_108348702|GENSCAN_predicted_peptide_2|277_aa
MKKKRESNRKERKRKEKEGEEKRKEKKKGKKRKEKKSMESKLISGQSPWEFIRPEWVAVW
DTKKPRPRNPPCPNFPHFQSGTDWTQLQKWKGPVQLEQDCHGSEWMGEKEREKRERERER
ERKKERKKERKKERKKERKKAKEERKQAKEGRKEERGRKEVNRKKERKKERKKERKKERK
KERKKERKKKKDLKLFTESSLGSKSSIIVMDRAMNKSYEQLTPPLSSNLAVSQNPPGNLP
SMLCCLEKSTRILNPLYVPLILNILKLKPPFPTQALQ

>gi568815590r:108101888_108348702|GENSCAN_predicted_CDS_2|834_bp
atgaaaaagaaaagggaaagtaacagaaaggaaaggaaaagaaaagaaaaggaaggagaa
gagaagagaaaagaaaagaaaaaaggaaagaaaagaaaagaaaagaagtccatggaaagt
aaactcatctcaggtcagtctccctgggagttcataagaccagagtgggtagctgtatgg
gatactaagaagcctaggcccagaaaccccccgtgcccaaacttcccacacttccagagt
ggtacagactggacacagcttcagaaatggaaagggccagtccagctagaacaagattgt
catggcagtgagtggatgggagaaaaagagagagagaagagagagagagaaagagagaga
gagagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaa
gcaaaggaagaaagaaagcaagcaaaggaaggaaggaaagaagaaagaggaaggaaggaa
gtaaacagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag
aaagaaagaaagaaagaaagaaagaaaaagaaagacctcaagttatttactgagtcctca
ctgggtagcaagtcttcgataatcgtcatggatagagctatgaacaagagctatgaacag
ctcactccgcctttgagctcaaatctggcagtgtctcagaatcccccaggaaatcttcca
agcatgctttgctgtctagagaagtccactaggattctgaatccactttatgttcctcta
attctcaacatattaaagctgaagccaccttttccaacccaagcattacaatga

>gi568815590r:108101888_108348702|GENSCAN_predicted_peptide_3|157_aa
MSRSGNGKWHDVTSSQHRRHQRMAQKENSYPWPYGKQTAPAGLSTLLPRVLPRIPTEAAR
ELPSCADPQPAAAPGHEVVENSCGKRSILTRPFLVDDLETGRPLGKDKFVHVYLARKKTS
HFIVALKAFKSQIEEGVGSTRCAGRWKSRPPFSIPTY

>gi568815590r:108101888_108348702|GENSCAN_predicted_CDS_3|474_bp
atgagcaggtcaggcaatggcaaatggcatgatgtgacctcgagtcaacatcggaggcat
caaaggatggcccagaaggagaacagttatccctggccctatggcaagcagacggctcca
gccggcctgagtaccctgctcccgcgagtcctcccgaggatccccaccgaagctgcgcgt
gagctcccgagctgcgcagacccacagcccgcagcggcccctggccatgaggtggtagag
aacagttgtgggaagcgcagcatcttaacgcggcccttcctggtcgacgaccttgagact
gggcgtcccctgggcaaagacaagtttgtacatgtgtacttggctcgaaagaagacaagc
catttcatcgtggccctcaaggccttcaagtctcagatagaggagggcgtggggagcacc
agatgcgcaggcagatggaaatccaggccccctttcagcatcccaacatattga

>gi568815590r:108101888_108348702|GENSCAN_predicted_peptide_4|110_aa
MELKNRTQELHNATTSISNQIDQAEERISELEDYLAEIRQADKIRGKRMKRNEQNLQELW
DYVKRLNLQLIGVTERDGENRTKLKNKLQNIIQETFLNLTRQANIQIQEI

>gi568815590r:108101888_108348702|GENSCAN_predicted_CDS_4|333_bp
atggagctgaaaaacagaacacaagaacttcacaatgcaaccacaagtatcagtaaccaa
atagaccaagcagaggaaagaatttcggagcttgaagactatcttgctgaaataagacag
gcagacaagattagaggaaagagaatgaaaaggaatgaacaaaacctccaagaactatgg
gattatgtaaaaagactgaacctacaactgattggggtaacagaaagagatggggagaac
agaaccaagttgaaaaacaaacttcagaatatcatccaggagaccttcctcaacctaaca
agacaggccaacattcaaattcaggaaatctag

>gi568815590r:108101888_108348702|GENSCAN_predicted_peptide_5|183_aa
MIVYLENPIFSAQNLLKLISNFSKVSGYKINVQKSQAFLYTSNRQTESQIMSELPFTIAS
KRIKYLGIQLARDMKDLFKENYKPLLNKIKEDTNKWKNIPCSQIGRINIVKMAILPKEKI
LSDVFAHFGEIEKYQGFYDKNLNITALHPRDEADLIVVDKLFDVLLDLVCQYFSKDFCID
VHQ

>gi568815590r:108101888_108348702|GENSCAN_predicted_CDS_5|552_bp
atgattgtatatctagaaaaccccatcttctcagcccaaaatctccttaagctgataagc
aacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattcttatac
accagtaacagacaaacagagagccaaatcatgagtgaactcccattcactattgcttca
aagagaataaaatacctaggaatccaacttgcaagggatatgaaggacctcttcaaggag
aactacaaaccactgctcaacaaaataaaagaggacacaaacaaatggaagaatattcca
tgctcacagataggaagaatcaatatcgtgaaaatggccatactgcccaaggaaaaaatc
ttatcagatgtttttgcacattttggggaaattgaaaaatatcaaggtttttatgataag
aacctcaacattacagccttgcatcccagggatgaagctgacttaatcgtagtggataaa
ctttttgatgtgctgctggatttggtttgccaatattttagtaaggacttttgcatcgat
gttcatcagtga

>gi568815590r:108101888_108348702|GENSCAN_predicted_peptide_6|261_aa
MEDEMNEMKREEKFREKRIKRNEQSLQEIWDYVKRPNLHLIGVPESDGENGTKLENTLQD
IIQENFPHPARQANIQIQEIQRTPQRYSLRRATPRHIIVRFTKVEMKEKMLRATREKEIQ
TTIREYYKHLYANKLENLEEMDKFLDTYTLPRLNQEEVESLNRPITGSEIVARINSLPTK
KSPGPDGFTAKFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKE
NFRPISLMNIDAKILNKILAN

>gi568815590r:108101888_108348702|GENSCAN_predicted_CDS_6|786_bp
atggaagatgaaatgaatgaaatgaagcgagaagagaagtttagagaaaaaagaataaaa
agaaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacatctg
attggtgtacctgaaagtgatggggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttcccccatccagcaaggcaggccaacattcagattcaggaaata
cagagaacgccacaaagatactccttgagaagagcaacaccaagacacataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcaaccagagagaaagaaatacaa
actaccatcagagaatactacaaacacctctatgcaaataaactagaaaatctagaagaa
atggataaattccttgacacatacaccctcccaagactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggctctgaaattgtggcaagaatcaatagcttaccaaccaaa
aaaagtccaggaccagatggattcacagccaaattctaccagaggtacaaggaggagctg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactca
ttttatgaggccagcatcatcctgataccaaagcctggcagagacacaaccaaaaaagag
aattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggca
aactga

>gi568815590r:108101888_108348702|GENSCAN_predicted_peptide_7|162_aa
MIVYQENPIVSAQSLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSEFPFTIAS
KRIKYLEIQLTRDVKDLFKENYKPLLNEIKEDTKKWKNIPCSQIGRINIVKMAILPKVSL
TSNGMHLGNSWQRFKCKSVVRSRETLTGLCRDGPTALALLAK

>gi568815590r:108101888_108348702|GENSCAN_predicted_CDS_7|489_bp
atgattgtatatcaagaaaaccccattgtctcagcccaaagtctccttaagctgataagc
aacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcttatac
accaataacagacaaacagagagccaaatcatgagtgaattcccattcacaatagcctca
aagagaataaaatacctagaaatccaacttacaagggatgtgaaggacctcttcaaggag
aactacaaaccactgctcaatgaaataaaagaggatacaaagaaatggaagaacattcca
tgctcacagataggaagaatcaatattgtgaaaatggccatactgcccaaggtctccctc
acatccaatggcatgcacttgggaaacagctggcaaaggttcaagtgcaaatctgtggtt
aggagcagagaaacactaactggcttatgcagagatggacccacagctctggccttgtta
gcgaaatga

>gi568815590r:108101888_108348702|GENSCAN_predicted_peptide_8|161_aa
MPKTINSCCRKLCPDVVQNFTGFTTEPIKEIMKEVMDMAKKVGGAGFQDTDLGEIQELTD
TIPQELTKHDLMEMFLNQCQMIRQCRSNSARTQIDVRHPTEGFRLFKIAFDFLHGTDPSD
TGTENYTNGEKRMSITLSQQSPIVLAPGTGFVEDKFSTDGG

>gi568815590r:108101888_108348702|GENSCAN_predicted_CDS_8|486_bp
atgcccaaaacaataaattcctgctgcagaaaactgtgtccagatgttgtgcaaaacttc
acaggatttacaacagaaccaatcaaggaaatcatgaaagaggttatggacatggcaaaa
aaggtggggggtgcagggtttcaagatacagatcttggagaaattcaagagctaacagac
accataccacaggaattaacaaaacacgacttgatggagatgtttctgaaccagtgccag
atgataagacaatgcagaagcaacagtgccagaacacaaattgatgttagacatccgaca
gaagggttccgattattcaagattgcttttgacttccttcatggcacagacccttctgat
acaggcactgaaaactacacaaatggagaaaaaaggatgagtattaccttaagccagcag
tccccaatcgttttggcaccaggcaccggtttcgtggaagacaagttttccacggatggg
gggtag

>gi568815590r:108101888_108348702|GENSCAN_predicted_peptide_9|597_aa
MSRKKEIVDRVGSARNIVPQGLSLIGAERNTKIIWHPLLRSDSGEDSGTEMSEIHSQTEP
ALACSISHYCDDGCIQMLNTPETLQCSAKDSKHFIPKECSIPGENRPPSDTGKTVKHMRS
TGSVCSFVGATNKVLVSTDSLFFGKMAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEK
ELLQGKLDLLSDTNMVDFAMDVYKNLYSDDIPHALREKRTTVVAQLKQLQAETEPIVKMF
EDPETTRQMQSTRDGRMLFDYLADKHGHEALHIINYLRSPQLPGHGPVPEGHRADDQKFR
QEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEILMQNWDA
AMEDLTRLKETIDNNDEKPSFTHVVGKERYLNAIQTMCPHILRYLTTAVITNKDVRKRRQ
VLKDLVKVIQQESYTYKDPITEFVECLYVNFDFDGAQKKLRECESVLVNDFFLVACLEDF
IENARLFIFETFCRIHQCISINMLADKLNMTPEEAERWIVNLIRNARLDAKIDSKLGHVV
MGNNAVSPYQQVIEKTKSLSFRSQMLAMNIEKKLNQNSRSEGFQHIILILADDNLHV

>gi568815590r:108101888_108348702|GENSCAN_predicted_CDS_9|1794_bp
atgtctaggaagaaagaaattgtggatagggttgggtcagccagaaacattgtaccacaa
ggtttgagtctaattggagctgaaaggaatacaaagattatttggcaccccctactgaga
tctgacagtggagaagacagtggcacagaaatgtctgagatccatagccagacagagcca
gctctggcctgctctatctctcattactgtgatgacggctgtatccagatgctaaacact
ccagagacactccaatgcagtgctaaagactcaaaacacttcatccccaaagaatgtagc
attccaggagaaaacaggcctccttctgacactggtaaaactgtgaagcacatgcgcagt
acaggatctgtctgttcgtttgtcggcgctaccaataaagttttagtgagcacagactcc
cttttctttggcaagatggcggagtacgacttgactactcgcatcgcgcactttttggat
cggcatctagtctttccgcttcttgaatttctctctgtaaaggagatatataatgaaaag
gaattattacaaggtaaattggaccttcttagtgataccaacatggtagactttgctatg
gatgtatacaaaaacctttattctgatgatattcctcatgctttgagagagaaaagaacc
acagtggttgcacaactgaaacagcttcaggcagaaacagaaccaattgtgaagatgttt
gaagatccagaaactacaaggcaaatgcagtcaaccagggatggtaggatgctctttgac
tacctggcggacaagcatggtcatgaggctttgcatataattaattatttaaggagtccc
caactcccaggtcatggaccagtaccggagggccacagagcagatgatcagaagtttagg
caggaatatttagatacactctacagatatgcaaaattccagtacgaatgtgggaattac
tcaggagcagcagaatatctttatttttttagagtgctggttccagcaacagatagaaat
gctttaagttcactctggggaaagctggcctctgaaatcttaatgcagaattgggatgca
gccatggaagaccttacacggttaaaagagaccatagataataatgatgaaaaacctagc
ttcacacatgtagttggaaaagaaagatatcttaatgcaattcagacaatgtgtccacac
attcttcgctatttgactacagcagtcataacaaacaaggatgttcgaaaacgtcggcag
gttctaaaagatctagttaaagttattcaacaggagtcttacacatataaagacccaatt
acagaatttgttgaatgtttatatgttaactttgactttgatggggctcagaaaaagctg
agggaatgtgaatcagtgcttgtgaatgacttcttcttggtggcttgtcttgaggatttc
attgaaaatgcccgtctcttcatatttgagactttctgtcgcatccaccagtgtatcagc
attaacatgttggcagataaattgaacatgactccagaagaagctgaaaggtggattgta
aatttgattagaaatgcaagactggatgccaagattgattctaaattaggtcatgtggtt
atgggtaacaatgcagtctcaccctatcagcaagtgattgaaaagaccaaaagcctttcc
tttagaagccagatgttggccatgaatattgagaagaaacttaatcagaatagcaggtca
gagggttttcaacacatcattttgatactggcagatgataacttacatgtgtag

>gi568815590r:108101888_108348702|GENSCAN_predicted_peptide_10|170_aa
MEATLEQDNKTRLEQFGGFRRKEDRKMWESLELPRDLWNDFDQNADSDMDNEVQAEVVSD
GDKELVRNWSKVWKGNVGLEPRYRVPTGALTSRVVRRGPPSFRPQKCRSTDSLHHEPGKA
AGTQCQPVKDLPKAVGAHSLHQPALDSEKHVSISGYSSDSVQTVKTHNAS

>gi568815590r:108101888_108348702|GENSCAN_predicted_CDS_10|513_bp
atggaagcgactttggagcaggacaacaagacgaggttggaacagtttggagggttcaga
agaaaagaagacagaaagatgtgggaaagtttggaacttcctagagacttgtggaatgat
tttgaccaaaatgctgatagtgatatggacaatgaagtccaggctgaggtggtctcagat
ggagataaggaacttgttagaaactggagtaaagtgtggaagggaaatgtggggctggag
ccccgatacagagtccccactggggcactgactagcagagttgtgagaagaggtccacca
tccttcagacctcagaaatgtagatccactgacagcttgcaccatgaacctggaaaagct
gcaggcactcaatgccagcctgtgaaggatctgcccaaggctgtgggagcccactccttg
catcagccagccctggattcagaaaaacatgtttccattagtggctactcctcagactca
gtgcagacagtgaagacacataatgcaagctga