GENSCAN 1.0	Date run:  5-Nov-116	Time: 12:44:07

Sequence gi568815575f:16619725_16860356 : 240632 bp : 43.77% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1442   1500   59  1  2   70   68    97 0.565   6.68
 1.02 Intr +   1758   1883  126  0  0   -9   86   110 0.421   0.89
 1.03 Intr +  13144  13174   31  1  1   79   50    11 0.001  -5.47
 1.04 Intr +  26606  26765  160  1  1   68  105    79 0.188   7.16
 1.05 Intr +  30457  30479   23  2  2   98   92     0 0.174  -1.34
 1.06 Intr +  30545  30576   32  1  2   94  113    22 0.199   2.23
 1.07 Intr +  31179  31245   67  0  1   35  111    69 0.199   2.81
 1.08 Intr +  32034  32162  129  2  0   26   91    51 0.507   0.09
 1.09 Term +  34681  34785  105  0  0   85   49    71 0.915   1.31
 1.10 PlyA +  34924  34929    6                               1.05

 2.17 PlyA -  35953  35948    6                               1.05
 2.16 Term -  46524  46426   99  0  0   83   39    66 0.662  -0.67
 2.15 Intr -  47833  47790   44  2  2   94  119     8 0.741   2.46
 2.14 Intr -  51724  51648   77  0  2   78   96    61 0.665   5.06
 2.13 Intr -  58726  58638   89  1  2   60   61    83 0.612   1.57
 2.12 Intr -  63502  63370  133  0  1  115  101   164 0.985  21.05
 2.11 Intr -  69877  69726  152  1  2   47  115    20 0.826  -0.44
 2.10 Intr -  71896  71816   81  1  0   34   77    95 0.851   2.83
 2.09 Intr -  73500  73417   84  0  0   77  105    12 0.770   1.82
 2.08 Intr -  73763  73647  117  2  0   82   80    74 0.900   6.66
 2.07 Intr -  76695  76565  131  1  2   73   87    10 0.944  -0.19
 2.06 Intr -  79369  79199  171  2  0   82   62   117 0.977   8.41
 2.05 Intr -  83192  83013  180  0  0   20   80   217 0.259  13.94
 2.04 Intr -  91869  91789   81  1  0   76  111    -1 0.337   0.61
 2.03 Intr -  92887  92611  277  1  1   23   93   272 0.916  18.29
 2.02 Intr - 100109  99805  305  0  2   87   26   312 0.480  21.21
 2.01 Init - 108773 108725   49  2  1   94   58    47 0.653   1.41
 2.00 Prom - 111582 111543   40                              -7.46

 3.00 Prom + 117493 117532   40                              -7.06
 3.01 Init + 118709 118753   45  1  0   69  119   -10 0.325   0.98
 3.02 Intr + 123977 124116  140  1  2   71   67   143 0.956   9.76
 3.03 Intr + 135221 135369  149  2  2   58   76   174 0.896  13.08
 3.04 Intr + 136939 136997   59  2  2   48   74    16 0.484  -5.20
 3.05 Intr + 137438 137585  148  1  1   53   93   140 0.577  10.81
 3.06 Term + 140508 140635  128  1  2   86   37   169 0.999  10.04
 3.07 PlyA + 141157 141162    6                               1.05

 4.00 Prom + 160307 160346   40                              -3.76
 4.01 Init + 166001 166016   16  1  1   76  108     6 0.473   1.79
 4.02 Intr + 167224 167310   87  2  0   32   85   106 0.464   4.64
 4.03 Intr + 168303 168352   50  1  2   60   67    51 0.378  -1.40
 4.04 Term + 171023 171115   93  1  0   36   49   127 0.595   1.43
 4.05 PlyA + 172898 172903    6                               1.05

 5.00 Prom + 175251 175290   40                              -4.16
 5.01 Init + 181260 181411  152  2  2   36   58   175 0.727   6.82
 5.02 Intr + 198224 198368  145  2  1   84   50    86 0.849   4.68
 5.03 Intr + 198850 199153  304  0  1  114   58   132 0.897   8.96
 5.04 Intr + 200440 200531   92  2  2   74   70    76 0.729   4.11
 5.05 Intr + 208370 208540  171  1  0   11   96   127 0.398   5.94
 5.06 Intr + 209852 210046  195  1  0  -15   80   289 0.689  17.41
 5.07 Intr + 212899 213018  120  0  0   50   78   161 0.996  11.99
 5.08 Intr + 217869 217961   93  2  0   68   63    57 0.700   1.36
 5.09 Term + 221704 222042  339  0  0   81   44   360 0.999  25.44
 5.10 PlyA + 222511 222516    6                               1.05

 6.09 PlyA - 223924 223919    6                               1.05
 6.08 Term - 225379 225311   69  1  0   83   40    83 0.950   0.94
 6.07 Intr - 226214 226104  111  2  0   61  101    27 0.742   1.88
 6.06 Intr - 229577 229520   58  1  1   61   80    87 0.652   4.09
 6.05 Intr - 232904 232687  218  2  2   80   81    48 0.255   0.60
 6.04 Intr - 233151 233025  127  2  1   97    8    96 0.943   3.18
 6.03 Intr - 234118 233958  161  1  2  113   67   185 0.981  17.69
 6.02 Intr - 237985 237870  116  2  2   89   47    20 0.895  -1.83
 6.01 Intr - 239125 238952  174  2  0   57   91   161 0.902  13.21

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:16619725_16860356|GENSCAN_predicted_peptide_1|243_aa
MTSVAMGTAINELPSDFIVRMPLLEHVEKQDGPGTKWAPALEQSERTRDSSYSTSPQNAD
PSPPFPQLKNKETGGTNSIHFIKLQQGFKEAVGVGCLGQHTAHSKDTHSRSTGYGQETSG
NSTAEAVSLLGNQNGVKDNGLERRKWPNGTKILQTTLSTKLYFSFLSCQNQNAFKATEYR
EELIVLTPIYSTVFPFAKEKAESGHLPRMGPNTLDDLFQELDKNGDGEVSFEEFQVLVKK
ISQ

>gi568815575f:16619725_16860356|GENSCAN_predicted_CDS_1|732_bp
atgaccagtgtggcgatgggcacggcgatcaacgagctgcctagtgacttcattgtcaga
atgcccctactggagcatgtggagaagcaggatggtccagggaccaagtgggctccagca
ctggagcagtctgagaggaccagagactcttcctacagcactagccctcaaaacgcagat
cccagccctccatttcctcagctgaaaaataaggagactggggggaccaacagcatccac
ttcataaagttgcagcaaggatttaaggaggccgtgggagttgggtgcctaggtcagcac
actgcccatagtaaagatacgcactcaagaagcacaggctatggtcaggagacctctggg
aactcaactgctgaagctgtttcactattgggcaaccagaatggtgtgaaagataatggt
ctggagagaaggaaatggcccaatggcactaaaatcctgcagacaaccctcagcacaaaa
ctgtacttcagctttttgagttgtcaaaatcaaaatgcattcaaggcaacagagtacaga
gaagagctgatcgtcctcactccaatatacagtactgtctttccttttgctaaagaaaaa
gctgagtcaggacacttgccaaggatgggtccaaacaccctagatgatctctttcaagaa
ctggacaagaatggagatggagaagttagttttgaagaattccaagtattagtaaaaaag
atatcccagtga

>gi568815575f:16619725_16860356|GENSCAN_predicted_peptide_2|689_aa
MAFHHVGQAGLELLASDSATVSDGCSGGASPLGCPPPATGCCKPNQLLKPRNIPLAGRRR
GPDPQRPQRALVAFDSTLRDSQGDVRKSEEHRSRRSPASMTTPPRPRKRHFRPKAPPLAL
VLDHCTNPGANPKLTSVSELGQQQGGEGKVGEEGAAHPEARVGGGKIPGAALDSPGSDPF
PSPTGERQASRGVEPAVPTGHPPRCYHHRAGPALNPGSDCYHSLALTVLELHRTRSSATI
LPMKYILVTGGVISGIGKGIIASSIGTILKSCGLRVTAIKIDPYINIDAGTFSPYEHGEV
FVLNDGGEVDLDLGNYERFLDINLYKDNNITTGKIYQHVINKERRGDYLGKTVQGAHWLD
FKFHGNRETDKQNPFSVITLMFIFAYWILVVNHPLWLILGGTIGDIEGMPFVEAFRQFQF
KAKRENFCNIHVSLVPQLSATGEQKTKPTQNSVRALRGLGLSPDLIVCRSSTPIEMAVKE
KISMFCHVNPEQVICIHDVSSTYRVPVLLEEQSIVKYFKERLHLPIGDSASNLLFKWRNM
ADRYERLQKICSIALVGKYTKLRDCYASVFKALEHSALAINHKLNLMYIDSIDLEKITET
EDPVKFHEAWQKLCKAEKMLPETGPNPDPKRGFLDLAQERIQDADSTEFRPNAPVPLSEF
CKMMVGLQSACLPATHAHPVVSLLLGTYF

>gi568815575f:16619725_16860356|GENSCAN_predicted_CDS_2|2070_bp
atggcgtttcaccatgttggccaggctggtcttgaactcctggcctcagactcagccacc
gtctcggacggctgctcgggtggagcatctccattgggctgcccaccgcctgccaccggc
tgctgcaagcccaaccaactgctcaagccccggaacatcccgctcgcgggccgccgccgc
ggtcccgatccccagagaccgcagcgagcactggttgcctttgactccactctgcgcgac
tcccagggagatgtccggaagtcggaggaacaccgcagccgccgcagccccgcctctatg
acgactccgccgcggccgcgcaagcgtcacttccgtccaaaggctccgcccctggcgctt
gttttggaccattgcacaaacccgggtgcaaaccccaagctcaccagcgtgagtgagctg
ggccagcagcagggaggagaggggaaggtgggcgaggagggcgccgcgcaccccgaggcc
cgtgtgggcggtgggaagatcccgggggcggctttggacagccccggcagcgaccccttc
cccagcccgacaggtgagcgccaggccagccgcggggtggagcccgccgtgcccaccggc
caccctccccggtgctaccaccaccgcgcaggccccgcactcaaccccggttctgattgt
tatcatagcttagctttgactgttctagaacttcatagaacaagatcatcagccactatt
ctgccaatgaagtacatcctggtcacgggtggggtcatctcaggcattggtaaagggatc
attgccagcagcattggaacgattctaaaatcatgtggactccgagttactgccataaaa
atcgacccctatattaacatcgatgctggcactttttcaccttatgaacacggtgaagtc
ttcgtcttaaatgatggtggagaagttgatttagaccttggaaattatgaaagatttttg
gatattaatctttataaagacaacaatatcaccacggggaagatatatcagcatgtgatc
aataaagagaggcgtggtgattacctggggaaaacagtgcaaggagctcattggctggat
tttaaatttcatggaaacagggaaactgacaaacagaaccccttctccgttataaccctg
atgtttatatttgcttattggatactagtggtcaaccatcctctttggttgattctggga
ggcaccattggagacatcgaaggaatgccgtttgtggaggcgtttagacaattccagttt
aaggcgaaaagagagaatttctgtaatatccacgttagccttgtcccacagctcagtgct
accggagaacaaaaaaccaaacccacccaaaacagcgtccgcgcactgaggggtttaggc
ctgtctccagatctgattgtctgccgaagttcaacgcccattgagatggccgtgaaggag
aagatttctatgttttgtcacgtgaaccctgaacaggtcatatgtatccatgatgtttct
tccacataccgagttcctgtgcttttagaggaacaaagcattgtgaaatattttaaggag
agattgcacctgcccatcggtgattctgcaagtaatttgctttttaagtggagaaatatg
gctgacaggtatgaaaggttacagaaaatatgctccatagccctggttggcaaatacacc
aagctcagagactgctacgcctctgtgttcaaagccctggaacactcagccctggccatc
aaccacaagttgaatctgatgtacatagactccattgatctggagaagatcactgaaacc
gaggaccctgtgaaatttcatgaagcttggcagaagctatgcaaagctgaaaagatgtta
ccagaaacgggtcccaatccagaccccaagagagggttcttggatcttgctcaagaaaga
attcaggatgctgattccacagagtttaggccaaatgccccagttcctctgagcgagttc
tgcaagatgatggttggccttcagtcagcctgtttgccagccacccatgcacacccagtc
gtgtccctgctgctgggcacctacttctaa

>gi568815575f:16619725_16860356|GENSCAN_predicted_peptide_3|222_aa
MQSARVSNLRKVTQLDKRNFLRDPPAGVQFNFDFDQMYPVALVMLQEDELLSKMRFALVP
KLVKEEVFWRNYFYRVSLIKQSAQLTALAAQQQAAGKEEKSNGREQDLPLAEAVRPKTPP
VVIKSQLKTQEDEEEISTSPGVSEFVSDAFDACNLNQEDLRKEMEQLVLDKKQEETAVLE
EDSADWEKELQQELQEYEVVTESEKRDENWDKEIEKMLQEEN

>gi568815575f:16619725_16860356|GENSCAN_predicted_CDS_3|669_bp
atgcagtcagcaagggtaagtaatttgcggaaggtcactcagctggacaagaggaatttc
cttcgtgaccctccggctggcgtgcaatttaatttcgactttgatcagatgtaccccgtg
gccctggtcatgctccaggaggatgagctgctaagcaagatgagatttgccctcgttcct
aaacttgtgaaggaagaagtgttctggaggaactacttttaccgcgtctccctgattaag
cagtcagcccagctcacggccctggctgcccaacagcaggccgcagggaaggaggagaag
agcaatggcagagagcaagatttgccgctggcagaggcagtacggcccaaaacgccaccc
gttgtaatcaaatctcagcttaaaactcaagaggatgaggaagaaatttctactagccca
ggtgtttctgagtttgtcagtgatgccttcgatgcctgtaacctaaatcaggaagatcta
aggaaagaaatggagcaactagtgcttgacaaaaagcaagaggagacagccgtactggaa
gaggattctgcagattgggaaaaagaactgcagcaggaacttcaagaatatgaagtggtg
acagaatctgaaaaacgagatgaaaactgggataaggaaatagagaaaatgcttcaagag
gaaaattag

>gi568815575f:16619725_16860356|GENSCAN_predicted_peptide_4|81_aa
MNEVPITAVTVLPALSAAVRGLAGVVGSPSWRRAERSSACRTEKEAVDQCPHQSDAVEKA
GQLSLPSFADDKLLNDVNSLA

>gi568815575f:16619725_16860356|GENSCAN_predicted_CDS_4|246_bp
atgaatgaagtgccaatcaccgccgtcaccgtgctcccggcgctgagcgccgccgtccgg
gggctcgctggggtcgtgggctcgccctcctggcgtcgggcagaaagatccagtgcttgc
aggactgaaaaagaagctgtggaccaatgtcctcaccagtcagatgctgtggagaaggct
gggcagctttcactgccctcatttgctgatgacaagctgctcaacgatgttaactcactt
gcctaa

>gi568815575f:16619725_16860356|GENSCAN_predicted_peptide_5|536_aa
MCDAPDPLALLLLLSLCGTPAPVLPSVMNKSSLGLARSDASAMLPVQPTEPVLEMSAFCQ
SRGEMVEKELVLLRIKVLDSRVLCPHSVGGNFTWKSPLGFEIGTMEEAGICGLGVKADML
CNSQSNDILQHQGSNCGGTSNKHSLEEDEGSDFITENRNLVSPAYCTQESREEIPGGEAR
TDPPDGQQDSECNRNKEKTLGKEVLLLMQALNTLSTPEEKLAALCKKYADLLEESRSVQK
QMKILQKKQAQIVKEKVHLQSEHSKAILARSKLESLCRELQRHNKTLKEENMQQAREEEE
RRKEATAHFQITLNEIQAQLEQHDIHNAKLRQENIELGEKLKKLIEQYALREEHIDKVFK
HKELQQQLVDAKLQQTTQLIKEADEKHQREREFLSLYMDKFEEFQTTMAKSNELFTTFRQ
EMEKKTVRDKEYKALQIKLERLEKLCRALQTERNELNEKVEVLKEQVSIKAAIKAANRDL
ATPVMQPCTALDSHKELNTSSKRALGAHLEAEPKSQRSAVQKPPSTGSAPAIESVD

>gi568815575f:16619725_16860356|GENSCAN_predicted_CDS_5|1611_bp
atgtgtgatgcccctgaccccttagctctcttgcttctgctctcgctgtgtggcacgcct
gctcctgttttgccttccgtcatgaataagagctccctgggcctcgccagaagcgatgcc
agcgccatgcttcctgtacagccaacagaaccggtcttggagatgtctgcattttgccag
agtcggggagagatggttgagaaagaacttgtgcttctaagaataaaagtcttggacagt
cgtgtcctatgcccacattcagttggtgggaacttcacgtggaagtcgccccttggtttt
gaaattggcacaatggaagaagctggaatttgtgggctaggggtgaaagcagatatgttg
tgtaactctcaatcaaatgatattcttcaacatcaaggctcaaattgtggtggcacaagt
aacaagcattcattggaagaggatgaaggcagtgactttataacagagaacaggaatttg
gtgagcccagcatactgcacgcaagaatcaagagaggaaatccctgggggagaagctcga
acagatccccctgatggtcagcaagattcagagtgcaacaggaacaaagaaaaaacttta
ggaaaagaagttttattactgatgcaagccctaaacaccctttcaaccccagaggagaag
ctggcagctctctgtaagaaatatgctgatcttctggaggagagcaggagtgttcagaag
caaatgaagatcctgcagaagaagcaagcccagattgtgaaagagaaagttcacttgcag
agtgaacatagcaaggctatcttggcaagaagcaagctagaatctctttgcagagaactt
cagcgtcacaataagacgttaaaggaggaaaatatgcagcaggcacgagaggaagaagaa
cgacgtaaagaagcaactgcacatttccagattaccttaaatgaaattcaagcccagctg
gagcagcatgacatccacaacgccaaactccgacaggaaaacattgagctgggggagaag
ctaaagaagctcatcgaacagtacgcactgagggaagagcacattgataaggtgttcaaa
cataaggaactgcaacagcagctcgtggatgccaaactgcagcaaacgacacaactgata
aaagaagctgatgaaaaacatcagagagagagagagtttctttctctttatatggataag
tttgaagaattccagactaccatggcaaaaagcaatgaactgtttacaaccttcagacag
gaaatggaaaagaaaacagtccgtgataaagagtacaaggcccttcaaataaaactggaa
cggttagagaagctgtgcagggctcttcagacagaaaggaatgagctcaatgagaaggtg
gaagtcctgaaagagcaggtatccatcaaagcggccatcaaagcggcgaacagggattta
gcaacacctgtgatgcagccctgtactgccctggattctcacaaggagctgaacacttcc
tcgaaaagagccctgggagcgcacctggaggctgagcccaagagtcagagaagcgctgtg
caaaagcccccgtccacaggctctgctccggccatcgagtcggttgactaa

>gi568815575f:16619725_16860356|GENSCAN_predicted_peptide_6|344_aa
XFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDP
SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIF
TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP
YSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVCDSFLVSVCQEMKSRDSSVK
LYQTRGSTIEKNVLYVVLHGDAHRVSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW
NPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSELEGQGS

>gi568815575f:16619725_16860356|GENSCAN_predicted_CDS_6|1035_bp
naatttggtggctttggttctgtaacaggaaaaattgaatgtgaaattaaaatcaatcac
gaaggagaagtaaaccgtgctcgttacatgccgcagaatcctcacatcattgctacaaaa
acaccatcttctgatgtgttggtttttgactatacaaaacaccctgctaaaccagaccca
agtggagaatgtaatcctgatctcagattaagaggtcaccagaaggaaggctatggtctc
tcctggaattcaaatttgagtggacatctcctaagtgcatctgatgaccatactgtttgt
ctgtgggatataaacgcaggaccaaaagaaggcaaaattgtggatgctaaagccatcttt
actggccactcagctgttgtagaggatgtggcctggcacctgctgcacgagtcattgttt
ggatctgttgctgatgatcagaaacttatgatatgggacaccaggtccaataccacctcc
aagccgagtcacttggtggatgcgcacactgccgaagtcaactgcctctcattcaatccc
tacagcgaatttattctagccaccggctctgcggataagaccgtagctttatgggatctg
cgtaacttaaaattaaaactccataccttcgaatctcataaagatgaaattttccaggta
tgtgacagttttctggtgtctgtatgtcaggaaatgaaatccagggattcatcagttaag
ctataccagactcgtgggtccactattgaaaaaaatgtcttgtacgtggtgttacatgga
gatgctcatagggtaagtaaaattggggaagaacaatcagcagaagatgcagaagatggg
cctccagaactcctgtttattcatggaggacacactgctaagatttcagattttagctgg
aaccccaatgagccttgggtcatttgctcagtgtctgaggataacatcatgcagatatgg
caaatggctgaaaatatttacaatgatgaagagtcagatgtcacgacatccgaactggag
ggacaaggatcttaa