GENSCAN 1.0	Date run:  5-Nov-116	Time: 13:15:15

Sequence gi568815578f:37803351_38044250 : 240900 bp : 46.96% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  30898  30937   40                              -2.16
 1.01 Init +  36724  36849  126  0  0   56   98   129 0.780   8.87
 1.02 Intr +  38989  39069   81  0  0  108   60    31 0.357   2.13
 1.03 Intr +  56549  56686  138  1  0   84   91   302 0.536  30.76
 1.04 Intr +  56922  56994   73  2  1   79   96    44 0.957   3.28
 1.05 Intr +  58746  58884  139  1  1   62   44    89 0.498   1.42
 1.06 Intr +  61871  62025  155  2  2   68   21   134 0.861   4.42
 1.07 Intr +  70859  70934   76  0  1   46  110    26 0.012  -0.83
 1.08 Intr +  71642  71756  115  2  1    7   65   113 0.017   1.35
 1.09 Intr +  77614  77769  156  0  0   54   89    42 0.155   1.11
 1.10 Intr +  77842  78005  164  0  2   87   66   136 0.711  10.07
 1.11 Term +  79725  79815   91  0  1   99   32    74 0.801   0.09
 1.12 PlyA +  80571  80576    6                               1.05

 2.00 Prom +  94655  94694   40                              -4.96
 2.01 Init + 100001 100121  121  1  1   96  113   250 0.999  26.65
 2.02 Intr + 104769 104950  182  1  2    8   72   166 0.730   6.59
 2.03 Intr + 111310 111425  116  0  2   52   77    73 0.844   1.85
 2.04 Intr + 119479 119533   55  1  1   54   68    62 0.010  -0.22
 2.05 Intr + 121303 121465  163  0  1   24   64    52 0.000  -4.05
 2.06 Intr + 128285 128454  170  0  2   97   95   211 0.742  22.37
 2.07 Intr + 133409 133474   66  1  0  107   73     9 0.164   0.40
 2.08 Term + 140631 140903  273  2  0  103   38   542 0.986  46.17
 2.09 PlyA + 141980 141985    6                               1.05

 3.00 Prom + 155435 155474   40                              -2.86
 3.01 Init + 167748 167767   20  2  2  113   61    19 0.754   1.23
 3.02 Intr + 168738 168784   47  0  2  122   95    14 0.575   3.55
 3.03 Intr + 169188 169316  129  1  0   61   84    27 0.375   0.27
 3.04 Intr + 174067 174176  110  2  2   53   94    64 0.615   3.50
 3.05 Term + 175567 175686  120  0  0   39   40   102 0.472  -1.03
 3.06 PlyA + 178679 178684    6                               1.05

 4.09 PlyA - 178798 178793    6                               1.05
 4.08 Term - 180289 180106  184  0  1  126   46   271 0.973  23.72
 4.07 Intr - 193112 193025   88  0  1  128   94    69 0.811  10.53
 4.06 Intr - 193603 193399  205  1  1   54   80   160 0.980  10.57
 4.05 Intr - 195978 195838  141  0  0  109   79    32 0.915   4.95
 4.04 Intr - 197169 197055  115  2  1   17   70   120 0.781   3.55
 4.03 Intr - 199426 199231  196  2  1   69   70   151 0.582   9.87
 4.02 Intr - 203047 202847  201  2  0   53   88   150 0.878  10.76
 4.01 Init - 210466 208165 2302  1  1   77   56   970 0.967  80.24
 4.00 Prom - 214712 214673   40                              -5.36

 5.00 Prom + 217852 217891   40                              -4.16
 5.01 Init + 230598 230748  151  2  1  102   92   283 0.521  30.30
 5.02 Intr + 237085 237214  130  2  1  105   91    29 0.056   4.65

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  68575  68663   89  2  2  121   44   203 0.999  17.02
S.002 Intr - 122215 122144   72  2  0   76   97   106 0.951   9.68
S.003 Init + 127446 127668  223  2  1   69    1   134 0.838   1.52
S.004 Intr - 182124 182080   45  0  0   88  107    55 0.871   6.01


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:37803351_38044250|GENSCAN_predicted_peptide_1|437_aa
MFSFLFPNPEHVCSILASLLRNLRGQQRTRLLNKFTENDSEKVDRLMELHFKYLGAMQVA
DKKIEGEKHDMVRRGEIIDNDTEEEFYLRRLDAGLFVLQHICYIMAEICNANVPQIRQRV
HQILNMRGSSIKIVRHIIKEKKRVKGSDGHSPTHAFRGDTLGASSHSQCQIRVNYCSEPH
FASSLRHTSLTSEVTDHSAKQNGASAGMQRYKGNEDGTVNSQLIRLDMKRSPKIQGSLAG
TYRMPSGIVIPDLCKLRLRAQRGRGVRFQGPRDQGDSVRRKQPPPLPDFNDPRPRKAFQG
EDLMTGTGFQQLQAEVSLSWGKIQRYTDRTSPGWPLGPTCCLTSSGLGTWTRVLCELLHS
LSLSLLICDMGGPLALETCHKLMHAKSLINYKVLIQAHVVITDIPEIPKKQLSEAATLLP
IKQGKFYRNRIGGTPDT

>gi568815578f:37803351_38044250|GENSCAN_predicted_CDS_1|1314_bp
atgttctcttttctctttcccaacccagagcatgtctgttcgatcctggcttccctcctg
cggaacctgagagggcagcagcggacccggcttctgaataaattcactgaaaatgacagt
gagaaggttgacagactaatggagttgcattttaaatatctgggtgcaatgcaggtggcg
gacaagaagattgaaggggaaaaacacgacatggtccggcgaggagagatcatcgacaat
gacaccgaggaggagttctacctccggcgcctggatgcggggctctttgttctccagcac
atctgctacatcatggccgagatctgcaatgccaatgtcccccagattcgccagagggtt
caccagatcctaaacatgcgaggaagctccatcaaaattgtcaggcatatcatcaaggag
aaaaagagagtaaaggggtctgatggacacagccccactcatgccttccggggtgacacc
ctgggggcttcttctcattctcagtgtcagattcgcgtgaattactgctcagagcctcat
tttgcctcctccctaaggcatacgtccctcacaagtgaggtgactgaccatagcgcaaag
cagaatggagccagtgctgggatgcagaggtacaaggggaatgaagacggcacagttaac
tcacagttaatccggctggacatgaaaaggagcccaaagatccagggaagcttagctggc
acatatcgaatgcccagtggcattgttatccccgatttatgcaagctgaggctgagggct
cagagaggcaggggagtacggttccagggcccgagggaccaaggagacagcgtaaggaga
aagcagccaccaccactccctgatttcaacgacccaaggccccgcaaagcttttcagggc
gaggacctgatgacaggcactggctttcagcagctgcaagcagaagtctctctgtcatgg
gggaagatccaaagatacacggaccgaacttccccaggctggcctctgggccccacctgc
tgcctgacctcctccgggctgggcacgtggacccgtgtgctgtgtgagttgcttcactcc
ctgagcctcagtctcctcatctgtgatatggggggacccctcgctttggagacctgccac
aagctgatgcacgcaaagagcttgatcaactataaagtgctgatccaggctcatgtcgtc
attactgatattcctgaaataccgaaaaaacagctgtcagaggcagccaccctgttaccg
attaaacaaggcaaattctatcggaacagaatcggaggcactccggacacctaa

>gi568815578f:37803351_38044250|GENSCAN_predicted_peptide_2|381_aa
MGAPLAVALGALHYLALFLQLGGATRPAGHAPWDNHVSGHAVFPKSFTPIGFDTLPISSS
CSLFPKQEKPQAASRTQGIWLLAMVTARMVGKVACGKQVGRRSQKHMTCQSRIARPAAGI
GLPFNTPTLQRGKLRLREAWSHGSTRGNEHREELEDRWRLSVHHHNQQQQQQHQNTHQSV
YFPVSGAGAVSSLRVRRGRKTLLLIELPAFSGALFTETPHDMTARTGEDVEMACSFRGSG
SPSYSLEIQWWYVRSHRDWTDKQAWASNQLAVVEGIYENALETVKCHGLGYVVKVVGSNI
SHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKAYLRVQPGENSVLHLPEAPPAAPAP
PPPKPGKELRKRSVDQEACSL

>gi568815578f:37803351_38044250|GENSCAN_predicted_CDS_2|1146_bp
atgggggccccgctcgccgtagcgctgggcgccctccactacctggcacttttcctgcaa
ctcggcggcgccacgcggcccgccggccacgcgccctgggacaaccacgtctccggccac
gcggttttccccaagtccttcacaccaattggttttgacaccttgcccatcagcagctcc
tgcagccttttccccaaacaagagaagccgcaggcggccagcaggacgcagggaatttgg
ctccttgccatggtgacagcaaggatggtgggcaaagtcgcctgcggcaaacaagtgggc
aggagaagccagaagcacatgacctgtcagagccgcatcgcacggcccgcagcaggcatc
gggctcccattcaacacgcccaccttgcagaggggaaaactgaggcttagagaggcgtgg
agccatgggagcaccagaggaaatgagcacagagaagagctagaggaccggtggagatta
tcagtacatcatcataatcagcagcagcagcagcagcatcaaaatacacatcaatctgtg
tattttccagtttctggtgctggtgcagtatcctcactcagagttaggagagggaggaag
accctgttgctgattgagctgcctgctttcagtggggccctgttcacagagacaccccat
gacatgacagcacggacgggcgaggacgtggagatggcctgctccttccgcggcagcggc
tccccctcctactcgctggagatccagtggtggtatgtacggagccaccgggactggacc
gacaagcaggcgtgggcctcgaaccagttagctgttgttgaaggcatatatgaaaacgct
ttggaaactgtaaagtgccatggattaggctatgtggtcaaggtggtgggcagcaacatc
tcccacaagctgcgcctgtcccgggtgaagcccacggacgaaggcacctacgagtgccgc
gtcatcgacttcagcgacggcaaggcccggcaccacaaggtcaaggcctacctgcgggtg
cagccaggggagaactccgtcctgcatctgcccgaagcccctcccgccgcgcccgccccg
ccgccccccaagccaggcaaggagctgaggaagcgctcggtggaccaggaggcctgcagc
ctctag

>gi568815578f:37803351_38044250|GENSCAN_predicted_peptide_3|141_aa
MVYRYTQARSGPPVAHCPSSLAYFPEISKAGAHKLEIPWVRTLVFAASGTLGTRPFSSGW
EWPGKESTITQNYFLKFGLYSLLWRKGSTGTWLPIKPDAQDWSKTLFQQQQQQQQQQQQQ
QQDCKKKKVKEDATETFMYGL

>gi568815578f:37803351_38044250|GENSCAN_predicted_CDS_3|426_bp
atggtctacagatacactcaggcaagatcaggtcctcctgttgcacattgtcccagctcc
ctggcctactttccagaaatcagcaaagcaggtgctcacaagctggaaataccctgggtt
aggaccctagtgtttgctgccagtgggaccttaggaaccaggcccttcagctctggctgg
gagtggcctggcaaggagtccaccatcactcagaattattttctgaaatttggcctctat
tccttactctggaggaaaggcagtacgggcacctggcttccaatcaagcccgacgcacag
gactggagtaagaccctgtttcaacaacaacagcaacaacaacaacaacaacaacaacaa
caacaagattgtaagaaaaaaaaagtcaaagaagatgccacagagacctttatgtatggc
ctgtaa

>gi568815578f:37803351_38044250|GENSCAN_predicted_peptide_4|1143_aa
MAVFDTPEEAFGVLRPVCVQLTKTQTVENVEHLQTRLQAVSDSALQELQQYILFPLRFTL
KTPGPKRERLIQSVVECLTFVLSSTCVKEQELLQELFSELSACLYSPSSQKPAAVSEELK
LAVIQGLSTLMHSAYGDIILTFYEPSILPRLGFAVSLLLGLAEQEKSKQIKIAALKCLQV
LLLQCDCQDHPRSLDELEQKQLGDLFASFLPGISTALTRLITGDFKQGHSIVVSSLKIFY
KTVSFIMADEQLKRISKVQAKPAVEHRVAELMVYREADWVKKTGDKLTILIKKIIECVSV
HPHWKVRLELVELVEDLLLKCSQSLVECAGPLLKALVGLVNDESPEIQAQCNKVLRHFAD
QKVVVGNKALADILSESLHSLATSLPRLMNSQDDQGKFSTLSLLLGYLKLLGPKINFVLN
SVAHLQRLSKALIQVLELDVADIKIVEERRWNSDDLNASPKTSATQPWNRIQRRYFRFFT
DERIFMLLRQVCQLLGYYGNLYLLVDHFMELYHQSVVYRKQAAMILNELVTGAAGLEVED
LHEKHIKTNPEELREIVTSILEEYTSQENWYLVTCLETEEMGEELMMEHPGLQAITSGEH
TCQVTSFLAFSKPSPTICSMNSNIWQICIQLEGIGQFAYALGKDFCLLLMSALYPVLEKA
GDQTLLISQVATSTMMDVCRACGYDSLQHLINQNSDYLVNGISLNLRHLALHPHTPKVLE
VMLRNSDANLLPLVADVVQDVLATLDQFYDKRAASFVSVLHALMAALAQWFPDTGNLGHL
QEQSLGEEGSHLNQRPAALEKSTTTAEDIEQFLLNYLKEKDVADGNVSDFDNEEEEQSVP
PKVDENDTRPDVEPPLPLQIQIAMDVMERCIHLLSDKNLQIRLKVSAQLLLCIPRVAGLR
LGVHVGGKPALAAHAGGKPALAVVLTAACDTDAGSLFSVLDVLDLCVVVLQSHKNQLLPL
AHQAWPSLVHRLTRDAPLAVLRAFKVLRTLGSKCGDFLRSRFCKDVLPKLAGSLVTQAPI
SARAGPVYSHTLAFKLQLAVLQGLGPLCERLDLGEGDLNKVADACLIYLSVKQPVKLQEA
ARSVFLHLMKVDPDSTWFLLNELYCPVQFTPPHPSLHPVQLHGASGQQNPYTTNVLQLLK
ELQ

>gi568815578f:37803351_38044250|GENSCAN_predicted_CDS_4|3432_bp
atggcagtttttgatactcctgaggaggcctttggtgtcttacgtccagtctgtgttcag
ctcacaaagacccagacagtggagaatgtggagcatctgcagacacgactacaagctgtg
agtgacagtgcccttcaggaacttcagcagtacatcctcttccctctgcgatttaccctg
aagaccccaggtcccaaaagagagcgtttgatccaaagtgtggtggaatgcctcacattt
gtcctttcttcaacatgtgtgaaagaacaggagcttctccaggaactcttttcagaactc
tctgcttgtctgtattcacccagctcccaaaaacctgcggctgtgtccgaggagttgaaa
ttggctgtgatccagggacttagcacattaatgcactcagcttatggggacatcattctg
actttttatgagccctccattctgccacgtttaggatttgctgtatctttactgttaggc
cttgcagaacaggagaaatcaaagcaaattaaaattgctgccttaaaatgtttacaggtt
ctactcttgcagtgtgattgtcaggaccatccaaggtcattggatgaacttgaacaaaag
cagctgggggatttgtttgcctcttttttacctggaatctcaactgcactgaccaggctt
atcacaggagactttaaacaaggtcacagcattgtcgtatcttccctaaagatcttttac
aagacagtgagcttcattatggctgatgaacagctcaaaagaatctcaaaggtccaagca
aaacctgcagttgagcacagagtagcagagctgatggtttacagggaagcagattgggta
aaaaagactggcgacaagttgactatccttattaaaaagataattgagtgtgtttctgtt
cacccacactggaaggtgagactggaactggtagaacttgtggaggaccttcttttgaag
tgcagtcaatcattggtcgaatgtgctggtccccttctgaaggccttagtgggactagta
aatgatgagagtcctgaaatccaagcccagtgcaataaagttctgagacattttgcagat
caaaaagtagtggtgggcaacaaagccctcgctgacatcttgtcagaaagcctgcattcc
cttgccacatctcttcctcgcctaatgaactcccaagatgaccagggcaaattctctact
ctttccttgttacttggttatctgaaactcttgggcccaaaaataaactttgtcctcaac
tctgtggcccatctccagcggctttccaaagcactcatccaagttctagagctagacgtg
gctgacatcaagattgttgaggaacggcgttggaactctgatgatctgaatgcttctcca
aagacctcagccacacagccttggaaccgcatccagaggagatatttccgcttcttcact
gatgagagaatcttcatgctcttgaggcaggtttgtcagctacttggttattatgggaat
ctttatttgcttgtggatcactttatggaactttaccatcaatctgtggtttaccggaag
caagctgccatgatccttaatgaactggttacaggggctgctgggctggaggttgaggat
cttcacgaaaaacatattaaaacaaacccagaagaactgagagagattgtgacatctata
cttgaagaatacacaagtcaagaaaattggtatttggttacctgtcttgaaactgaggaa
atgggagaggagctgatgatggagcacccaggcctccaagccatcacgtctggtgaacac
acctgccaagttacatcttttctagccttctcaaagccaagtcccactatttgctccatg
aacagtaacatctggcaaatatgcattcagttggaaggaattggccagtttgcatatgca
ctaggaaaagacttctgtttgctcttgatgtcagccctttatccagtactggagaaggct
ggagaccaaaccctactcattagtcaggtggctaccagcaccatgatggacgtttgccgt
gcttgtggctacgactccctgcagcacctgatcaatcaaaattcagactatttagtgaat
gggatctctttaaatctgcgtcatctggctctgcatcctcataccccaaaggtcctggaa
gtcatgctgcggaactcagatgctaacctgcttcctttggtggcagatgtggttcaagat
gtcttggccaccctggaccaattttacgataagagagctgcttcctttgtcagcgttctg
catgctctgatggcagcattagcccagtggttcccagacacaggtaatcttgggcacctc
caagagcaaagtttaggagaagagggaagtcatttgaaccaaagaccagcagctcttgag
aagagcaccaccacagctgaagacatcgaacagtttttgctgaactacctcaaagagaag
gatgtggcagatggaaatgtctcggattttgataatgaagaagaggaacagtcagtccct
cccaaagtggatgagaatgacacccgtccagatgtggagccaccactgccattgcagatc
caaatagccatggacgtgatggaacgctgcatccacttgttgtcagataaaaatctgcaa
atccgcctgaaggtcagtgcgcagctgcttctctgcattcccagagtagcaggactaagg
ttgggcgtccatgtgggagggaagcctgcgctggccgcccacgcgggagggaagcctgcg
ctggccgtcgtactgaccgctgcctgtgacactgatgcaggcagtctcttttcagtcttg
gatgtgctggatctgtgtgtggttgttcttcagtcccacaaaaaccagctgcttcccttg
gctcatcaggcctggccctcgctcgttcaccgactcacacgggacgcccccctggcagtg
cttagagccttcaaggttttacgtaccctgggaagcaagtgtggtgactttcttcgcagc
cggttctgcaaagatgtcctgccaaagctggctggctccctagtcacccaggcccccatc
agtgccagggctggaccagtttactcgcacacgctggccttcaagttgcagctggctgtc
ttacagggcctgggccccctctgtgagagactggacctaggtgagggtgacctgaataaa
gtggctgatgcctgcttgatttacctcagtgtcaaacagcccgtgaaattacaagaggct
gccaggagcgtcttcctccacttgatgaaggtggacccagactccacctggttcctcctg
aacgagctttactgccccgtgcagttcacacctccccaccccagcctccaccctgtgcag
ctgcacggggccagcgggcagcagaacccctacacgaccaacgtgctccagctgctcaag
gagctgcagtga

>gi568815578f:37803351_38044250|GENSCAN_predicted_peptide_5|94_aa
MSSFSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFL
YLANDVIQNSKRKGPEFTREFESVLVDAFSHVAS

>gi568815578f:37803351_38044250|GENSCAN_predicted_CDS_5|282_bp
atgtcctccttctctgagtcggcgctggagaagaagctctcggagctgagcaactctcag
cagagcgtgcagaccctgtccctttggctcatccaccaccgcaagcacgcgggacccatc
gtctccgtgtggcaccgcgagctccgcaaagccaaatcaaatagaaagcttacttttctg
tatttagcgaatgatgtcatccaaaacagtaaaaggaaaggacctgaattcactagagaa
tttgaatctgtccttgtggatgctttttctcatgttgccagn