GENSCAN 1.0	Date run:  6-Nov-116	Time: 22:16:58

Sequence gi568815585r:108108536_108311268 : 202733 bp : 37.04% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   7551   7630   80  2  2   41  105    63 0.327   3.88
 1.02 Intr +  17825  17969  145  2  1   68   92    98 0.679   7.56
 1.03 Term +  19728  19856  129  2  0   76   38    69 0.576  -2.10
 1.04 PlyA +  20413  20418    6                               1.05

 2.10 PlyA -  20534  20529    6                               1.05
 2.09 Term -  21871  21695  177  1  0  -31   42   211 0.274   1.30
 2.08 Intr -  25964  25746  219  2  0   59   65   144 0.323   6.78
 2.07 Intr -  30529  30386  144  1  0   -9  101    98 0.035   0.96
 2.06 Intr -  50014  49963   52  0  1  107   57     8 0.041  -2.41
 2.05 Intr -  50623  50377  247  2  1   70   59   143 0.102   5.20
 2.04 Intr -  70029  69904  126  1  0   40  101    96 0.277   5.83
 2.03 Intr -  71528  71504   25  2  1   91   94    20 0.043  -0.42
 2.02 Intr -  82528  82312  217  0  1  102   87    65 0.104   5.38
 2.01 Init -  89350  89280   71  1  2   70   68    68 0.050   3.57
 2.00 Prom -  95226  95187   40                              -6.55

 3.02 PlyA -  95331  95326    6                               1.05
 3.01 Sngl - 102733  99998 2736  1  0   43   42  1663 0.616 149.82
 3.00 Prom - 107502 107463   40                              -7.85

 4.00 Prom + 107912 107951   40                              -2.25
 4.01 Init + 109644 109698   55  2  1   80   63    91 0.199   6.63
 4.02 Intr + 110008 110124  117  2  0   30   80   146 0.359   7.52
 4.03 Term + 120664 121697 1034  2  2  128   35   263 0.331  16.29
 4.04 PlyA + 122352 122357    6                               1.05

 5.00 Prom + 123411 123450   40                              -2.65
 5.01 Sngl + 133188 133319  132  2  0   90   28   156 0.524   2.82
 5.02 PlyA + 135807 135812    6                               1.05

 6.03 PlyA - 136041 136036    6                               1.05
 6.02 Term - 147516 146638  879  0  0   60   32   298 0.850  12.95
 6.01 Init - 151099 151025   75  1  0   99   81    57 0.867   7.24
 6.00 Prom - 156297 156258   40                              -4.85

 7.00 Prom + 159490 159529   40                              -2.85
 7.01 Init + 161361 161699  339  2  0   44   87   287 0.546  21.50
 7.02 Intr + 161805 161889   85  2  1   88   91    75 0.755   6.27
 7.03 Intr + 168949 169036   88  2  1   10   65   116 0.059  -0.39
 7.04 Intr + 194241 194358  118  0  1  112   22    62 0.487   1.55
 7.05 Intr + 194919 195069  151  2  1   93   59    76 0.658   4.01
 7.06 Term + 198291 198403  113  1  2   51   43   114 0.732   0.94
 7.07 PlyA + 199791 199796    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:108108536_108311268|GENSCAN_predicted_peptide_1|117_aa
MLEPQLKELVGVPFPVRYKSANQGLQSYHLSDIDNMLSNYCFSSLMYKTEVVVLSFSGGH
TEDSMGNPCKVLNKKTEGRTVVFPIFEVLNLGLASWLLSLQTAYCGKSPCDPMSQFF

>gi568815585r:108108536_108311268|GENSCAN_predicted_CDS_1|354_bp
atgttagagccccagctgaaggagttagtcggagtcccatttcctgtaaggtacaagagt
gcaaatcagggcctacagagttaccatctgagtgacattgacaatatgcttagcaactat
tgcttcagttctcttatgtacaaaacagaggtggtggtgctgtctttctccgggggtcac
acagaagattcgatggggaatccttgtaaagtgcttaacaagaagactgaaggccgcact
gtcgtcttccctatttttgaggttttgaatctcggactggcttcctggctcctcagcttg
cagacggcgtattgtgggaagtcaccttgtgatcccatgagtcaattcttctaa

>gi568815585r:108108536_108311268|GENSCAN_predicted_peptide_2|425_aa
MTIKKYPDVATCRGVKTGGATSIYISVMLNGRHVPPQIPLNMRLCPSLRISEIPNDVGFH
SPALNAPLTSKLSNVPSNSKHCFQILHLQWGLLFLKVLGESKDSGVKPQTFAVSVTALKG
GASGVVCSSWWVCGPADFRNEASDPRAIRVFYARFHGHKEVEAFRYCKEFRQTWGQESNT
KSGPLYENGCEGEGKLLGGPALGRMLFNQSFLREMTREHVISLPQRRTLNLLPCCGVTSK
PGDTAWCPDKRGLGSLFTPVTTRGHREGTIYENNPSPDTLSPGALILDFSASITKTQKNL
VTLSGIFFQSEKAIWNPAECPRSPGSVGVSFRSLESGVRTTGVEACKDVYLLSDLKENKF
QKAVSESMEQKTQRQTDLDLIREQKQEELMSVADCGMWDERMNENETEGNVGEKGTQEAP
QQSQR

>gi568815585r:108108536_108311268|GENSCAN_predicted_CDS_2|1278_bp
atgaccatcaaaaagtatccagatgttgccacctgcaggggtgtcaagactggtggtgct
actagcatctacatttctgttatgttaaatgggagacatgttcctccacagatccccctc
aatatgaggctctgtccttctctgagaatttcagaaatccctaatgacgtaggcttccat
agcccagccctaaatgctccactgacatccaagctttcaaatgtcccttcaaattctaag
cactgttttcagatccttcaccttcagtggggactcctctttttgaaagtcttgggtgaa
tccaaagattcaggagtgaagccacagaccttcgcagtgagtgttacagctcttaaaggt
ggtgcttccggagttgtttgctcctcctggtgggtttgtggtcccgctgacttcaggaat
gaagcctcagaccctcgcgccatccgagtcttctatgcccgttttcatggacacaaggag
gttgaagctttcaggtattgtaaagagttcagacaaacgtggggacaagagtcaaacacc
aaatctggaccattatatgagaatggctgtgaaggagaaggcaagcttctgggtggccca
gctctgggtcgcatgctatttaaccagtccttccttagggagatgacgagggagcacgtg
ataagcctcccacagagacgcacgctaaacctccttccctgctgtggagtcacctcaaag
ccaggtgatacggcttggtgccctgataaaagaggcctagggagcttgttcaccccagtc
accacacgaggacacagagaagggaccatctatgagaacaatccctcaccagacacccta
tctcctggtgctttgatcttggatttttcagcctccataacgaaaacccaaaagaatctg
gttacattatctggcattttcttccagagcgagaaagcaatatggaatccggctgaatgt
ccaagatcaccaggcagtgtgggtgtatctttcaggagcctcgagtctggggtcagaaca
accggtgttgaggcttgcaaggatgtgtatttattgagtgaccttaaagaaaataagttc
cagaaggctgtttctgaatctatggaacagaaaactcaaagacagacagacctggacctc
attagagaacaaaagcaagaggaactgatgtcagtagcagactgtgggatgtgggatgag
aggatgaatgaaaatgaaacagaagggaatgttggtgaaaagggtacccaagaggcccca
cagcagagccagcgctaa

>gi568815585r:108108536_108311268|GENSCAN_predicted_peptide_3|911_aa
MAASQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFREFLDSWRKFHDALHKNHKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHG
DAGDFAMIAYFVLKPRCLQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSA
LEQKWLIRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTD
QFGASPTEGSLTPFIHNAFKADIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQAHTKNEVIDALNE
AIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKPFHRKAPPSSILC
GTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCTLRFPRIEKIRDDKEWHECMTLDDLE
QLRGKASGKLASKHLYIGGDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLTNVNKISNIFE
DVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIILSNKHDV
VKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFIDTDLNQLKEVFSG
IKNSNEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTVYLDSYAVINDLSTKNEGTRLAI
KALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKILKESWVTDSIDK
CELQEENQYLI

>gi568815585r:108108536_108311268|GENSCAN_predicted_CDS_3|2736_bp
atggctgcctcacaaacttcacaaactgttgcatctcacgttccttttgcagatttgtgt
tcaactttagaacgaatacagaaaagtaaaggacgtgcagaaaaaatcagacacttcagg
gaatttttagattcttggagaaaatttcatgatgctcttcataagaaccacaaagatgtc
acagactctttttatccagcaatgagactaattcttcctcagctagaaagagagagaatg
gcctatggaattaaagaaactatgcttgctaagctttatattgagttgcttaatttacct
agagatggaaaagatgccctcaaacttttaaactacagaacacccactggaactcatgga
gatgctggagactttgcaatgattgcatattttgtgttgaagccaagatgtttacagaaa
ggaagtttaaccatacagcaagtaaacgaccttttagactcaattgccagcaataattct
gctaaaagaaaagacctaataaaaaagagccttcttcaacttataactcagagttcagca
cttgagcaaaagtggcttatacggatgatcataaaggatttaaagcttggtgttagtcag
caaactatcttttctgtttttcataatgatgctgctgagttgcataatgtcactacagat
ctggaaaaagtctgtaggcaactgcatgatccttctgtaggactcagtgatatttctatc
actttattttctgcatttaaaccaatgctagctgctattgcagatattgagcacattgag
aaggatatgaaacatcagagtttctacatagaaaccaagctagatggtgaacgtatgcaa
atgcacaaagatggagatgtatataaatacttctctcgaaatggatataactacactgat
cagtttggtgcttctcctactgaaggttctcttaccccattcattcataatgcattcaaa
gcagatatacaaatctgtattcttgatggtgagatgatggcctataatcctaatacacaa
actttcatgcaaaagggaactaagtttgatattaaaagaatggtagaggattctgatctg
caaacttgttattgtgtttttgatgtattgatggttaataataaaaagctagggcatgag
actctgagaaagaggtatgagattcttagtagtatttttacaccaattccaggtagaata
gaaatagtgcagaaaacacaagctcatactaagaatgaagtaattgatgcattgaatgaa
gcaatagataaaagagaagagggaattatggtaaaacaacctctatccatctacaagcca
gacaaaagaggtgaagggtggttaaaaattaaaccagagtatgtcagtggactaatggat
gaattggacattttaattgttggaggatattggggtaaaggatcacggggtggaatgatg
tctcattttctgtgtgcagtagcagagaagccccctcctggtgagaagccatctgtgttt
catactctctctcgtgttgggtctggctgcaccatgaaagaactgtatgatctgggtttg
aaattggccaagtattggaagccttttcatagaaaagctccaccaagcagcattttatgt
ggaacagagaagccagaagtatacattgaaccttgtaattctgtcattgttcagattaaa
gcagcagagatcgtacccagtgatatgtataaaactggctgcaccttgcgttttccacga
attgaaaagataagagatgacaaggagtggcatgagtgcatgaccctggacgacctagaa
caacttagggggaaggcatctggtaagctcgcatctaaacacctttatataggtggtgat
gatgaaccacaagaaaaaaagcggaaagctgccccaaagatgaagaaagttattggaatt
attgagcacttaaaagcacctaaccttactaacgttaacaaaatttctaatatatttgaa
gatgtagagttttgtgttatgagtggaacagatagccagccaaagcctgacctggagaac
agaattgcagaatttggtggttatatagtacaaaatccaggcccagacacgtactgtgta
attgcagggtctgagaacatcagagtgaaaaacataattttgtcaaataaacatgatgtt
gtcaagcctgcatggcttttagaatgttttaagaccaaaagctttgtaccatggcagcct
cgctttatgattcatatgtgcccatcaaccaaagaacattttgcccgtgaatatgattgc
tatggtgatagttatttcattgatacagacttgaaccaactgaaggaagtattctcagga
attaaaaattctaacgagcagactcctgaagaaatggcttctctgattgctgatttagaa
tatcggtattcctgggattgctctcctctcagtatgtttcgacgccacaccgtttatttg
gactcgtatgctgttattaatgacctgagtaccaaaaatgaggggacaaggttagctatt
aaagccttggagcttcggtttcatggagcaaaagtagtttcttgtttagctgagggagtg
tctcatgtaataattggggaagatcatagtcgtgttgcagattttaaagcttttagaaga
acttttaagagaaagtttaaaatcctaaaagaaagttgggtaactgattcaatagacaag
tgtgaattacaagaagaaaaccagtatttgatttaa

>gi568815585r:108108536_108311268|GENSCAN_predicted_peptide_4|401_aa
MVDSRAHRVRHLFTTEASAAPGLEEDDEERRKRRGGTLLRGARFRARGRLRSLSASLRYL
QRATMEKSWMLWNFVERWLIALASWSWALCRISLLPLIVTFHLYGGIILLLLIFISIAGI
LYKFQDVLLYFPEQPSSSRLYVPMPTGIPHENIFIRTKDGIRLNLILIRYTGDNSPYSPT
IIYFHGNAGNIGHRLPNALLMLVNLKVNLLLVDYRGYGKSEGEASEEGLYLDSEAVLDYV
MTRPDLDKTKIFLFGRSLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSFFPMR
YLPLWCYKNKFLSYRKISQCRMPSLFISGLSDQLIPPVMMKQLYELSPSRTKRLAIFPDG
THNDTWQCQGYFTALEQFIKEVVKSHSPEEMAKTSSNVTII

>gi568815585r:108108536_108311268|GENSCAN_predicted_CDS_4|1206_bp
atggtggactcccgagctcatcgggtccggcacctcttcaccacggaggcctcggcggcc
cctgggctggaggaggatgatgaggagcgacggaagcgacgcgggggtacgctgctgcgc
ggcgcccggtttcgtgcccgcggccgactgcgcagcctgtccgcgagtctgagatactta
cagagagctacaatggaaaagtcctggatgctgtggaactttgttgaaagatggctaata
gccttggcttcatggtcttgggctctctgccgtatttctcttttacctttaatagtgact
tttcatctgtatggaggcattatcttacttttgttaatattcatatcaatagcaggtatt
ctgtataaattccaggatgtattgctttattttccagaacagccatcctcttcacgtctt
tatgttcccatgcccactggcattccacatgaaaacattttcatcagaaccaaagatgga
atacgtctgaatcttattttgatacgatacactggagacaattcaccctattccccaact
ataatttattttcatgggaatgcaggcaacataggtcacaggttgccaaatgcattactt
atgttggttaacctcaaagttaaccttttgctggttgattatcgaggatatggaaaaagt
gaaggagaagcaagtgaagaaggactctacttagattctgaagctgtgttagactacgtg
atgactagacctgaccttgataaaacaaaaatttttctttttggccgttccttgggtgga
gcagtggctattcatttggcttctgaaaattcacataggatttcagccattatggtggag
aacacatttttaagcataccacatatggccagcactttattttcattctttccgatgcgt
taccttcctttatggtgctacaaaaataaatttttgtcctacagaaaaatctctcagtgt
agaatgccttcacttttcatctctggactctcagatcaattaattccaccagtaatgatg
aaacaactttatgaactctccccatctcggactaagagattagccatttttccagatggg
actcacaatgacacatggcagtgccaaggctatttcactgcacttgaacagttcatcaaa
gaagtcgtaaagagccattctcctgaagaaatggcaaaaacttcatctaatgtaacaatt
atataa

>gi568815585r:108108536_108311268|GENSCAN_predicted_peptide_5|43_aa
MEVETAVMRSRDKEAEEHQQPQKLEARKDSSPEAFGGGGPAGA

>gi568815585r:108108536_108311268|GENSCAN_predicted_CDS_5|132_bp
atggaggtggagactgcagtgatgagatcacgagacaaggaagccgaggaacaccagcag
ccacagaaactagaagcaaggaaagactcctccccagaagcctttggagggggtggtcct
gctggtgcttaa

>gi568815585r:108108536_108311268|GENSCAN_predicted_peptide_6|317_aa
MTDSLQRLEELLSGGMPVCNVTDNKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMS
ELPFTIASKRIKYLGIQLKRDVKDLFKENYKPLLNEIKEDTKKWKNIPCSWVGRINIVKM
AILPKIIYRFNAIPIKLPMTFFTELEKNYFKVHTEPKKSSHRQVNPKPKQQSRRHHATDF
KLYYKATVTKTAWYWYQNRDIDQWNRTKPSEITPHIYNHLIFDKPDKNKQWGKDSLFNKW
CWENWLAICRKLKLDPFLTPYTKINSRWIKDLHFRSKTIKTLEENLGITIQDTGMGKDFT
SKTQKQWQQKPKWTNGI

>gi568815585r:108108536_108311268|GENSCAN_predicted_CDS_6|954_bp
atgacggatagtttgcaaagactggaagaactactctctggtggcatgcctgtttgcaat
gtgactgataataagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgta
caaaaatcacaagcattcttatacaccaataacagacaaacagagagccaaatcatgagt
gaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttaaaagg
gatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggat
acaaagaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatg
gccatactgcccaagataatttatagattcaatgccatccccatcaagctaccaatgact
ttcttcacagaattggaaaaaaactactttaaagttcatacggaaccaaaaaagagctcg
catcgccaagtcaatcctaagccaaaacaacaaagccggaggcatcacgctactgacttc
aaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagat
atagatcaatggaacagaacaaagccctcagaaataacaccgcatatctacaaccatctg
atctttgacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaatgg
tgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacacct
tatacaaaaattaattcaagatggattaaagacttacattttagatctaaaaccataaaa
accctagaagaaaacctaggcattaccattcaggacacaggcatgggcaaggacttcacg
tctaaaacacaaaagcaatggcaacaaaagccaaaatggacaaatgggatctaa

>gi568815585r:108108536_108311268|GENSCAN_predicted_peptide_7|297_aa
MDDSTEREQSRLTSCLKKREEMKLKECVSILPRKESPSVRSSKDGKLLAATLLLALLSCC
LTVVSFYQVAALQGDLASLRAELQGHHAEKLPAGAGAPKAGLEEAPAVTAGLKIFEPPAP
GEGNSSQNSRNKRAVQGPEETEMLQERSPDPDPRRGFLDLTPEKIRGESTGLPSVATFGP
RNGEISSSGNILPNSSDTLSSLGIKGKSLLVLYTDKTYAMGHLIQRKKVHVFGDELSLVT
LFRCIQNMPETLPNNSCYSAGIAKLEEGDELQLAIPRENAQISLDGDVTFFGALKLL

>gi568815585r:108108536_108311268|GENSCAN_predicted_CDS_7|894_bp
atggatgactccacagaaagggagcagtcacgccttacttcttgccttaagaaaagagaa
gaaatgaaactgaaggagtgtgtttccatcctcccacggaaggaaagcccctctgtccga
tcctccaaagacggaaagctgctggctgcaaccttgctgctggcactgctgtcttgctgc
ctcacggtggtgtctttctaccaggtggccgccctgcaaggggacctggccagcctccgg
gcagagctgcagggccaccacgcggagaagctgccagcaggagcaggagcccccaaggcc
ggcctggaggaagctccagctgtcaccgcgggactgaaaatctttgaaccaccagctcca
ggagaaggcaactccagtcagaacagcagaaataagcgtgccgttcagggtccagaagaa
acagaaatgttacaggaaaggagtcccgatccagacccccggagagggttcttggatctg
acgccagaaaaaattcggggcgaatccacagggctcccttctgttgccacatttgggcca
aggaatggagagatttcttcgtctggaaacattttgccaaactcttcagatactctttcc
tctctgggaatcaaaggaaaatctctactagttttatatactgataagacctacgccatg
ggacatctaattcagaggaagaaggtccatgtctttggggatgaattgagtctggtgact
ttgtttcgatgtattcaaaatatgcctgaaacactacccaataattcctgctattcagct
ggcattgcaaaactggaagaaggagatgaactccaacttgcaataccaagagaaaatgca
caaatatcactggatggagatgtcacattttttggtgcattgaaactgctgtga