GENSCAN 1.0	Date run:  6-Nov-116	Time: 22:28:01

Sequence gi568815597r:221602415_221839744 : 237330 bp : 39.37% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2282   2287    6  1  0   96   93     0 0.322   2.21
 1.02 Term +  18804  18992  189  2  0   13   39   187 0.354   2.77
 1.03 PlyA +  19565  19570    6                               1.05

 2.00 Prom +  20164  20203   40                              -5.25
 2.01 Sngl +  20453  20776  324  1  0   52   45   194 0.815   7.25
 2.02 PlyA +  20962  20967    6                               1.05

 3.00 Prom +  25601  25640   40                              -6.85
 3.01 Sngl +  33781  34020  240  0  0   65   43   223 0.388  10.33
 3.02 PlyA +  35596  35601    6                               1.05

 4.00 Prom +  36336  36375   40                              -5.75
 4.01 Init +  61405  61682  278  0  2   48   31   179 0.886   4.70
 4.02 Intr +  65354  65502  149  2  2   73  103    44 0.099   3.36
 4.03 Intr +  69069  69159   91  1  1   55   70   129 0.020   5.93
 4.04 Intr +  94014  94401  388  0  1   73  106   137 0.029   7.87
 4.05 Term +  98680  98790  111  0  0   39   49    96 0.211  -1.62
 4.06 PlyA +  99032  99037    6                               1.05

 5.10 PlyA -  99751  99746    6                               1.05
 5.09 Term - 100263  99998  266  1  2  118   48   342 0.958  27.89
 5.08 Intr - 104052 103681  372  1  0  129   21   412 0.919  32.71
 5.07 Intr - 125882 125733  150  0  0   59   82    59 0.016   1.61
 5.06 Intr - 137218 136520  699  2  0   63   90   526 0.067  40.82
 5.05 Intr - 138928 138760  169  1  1   62   98    52 0.072   2.20
 5.04 Intr - 139153 139033  121  0  1   74   20    81 0.065  -0.52
 5.03 Intr - 141144 140834  311  0  2  101   63   132 0.055   6.19
 5.02 Intr - 141424 141329   96  1  0   57  110    31 0.685   1.49
 5.01 Init - 141687 141550  138  0  0   77   50    96 0.831   4.89
 5.00 Prom - 146635 146596   40                              -5.35

 6.03 PlyA - 146706 146701    6                               1.05
 6.02 Term - 147525 147306  220  2  1   17   47   218 0.253   6.13
 6.01 Init - 157663 157545  119  1  2   79   76   123 0.830   9.93
 6.00 Prom - 157930 157891   40                              -5.15

 7.12 PlyA - 158609 158604    6                               1.05
 7.11 Term - 172249 171940  310  0  1   74   40   231 0.289  10.45
 7.10 Intr - 177940 177845   96  0  0   39  100   106 0.256   5.11
 7.09 Intr - 179005 178873  133  2  1   91  -16   113 0.183  -0.02
 7.08 Intr - 179621 179570   52  2  1   76   97    42 0.255   1.46
 7.07 Intr - 179939 179795  145  1  1   86   32   144 0.266   7.96
 7.06 Intr - 180143 180049   95  2  2   56   25    45 0.447  -7.16
 7.05 Intr - 180317 180238   80  0  2  137   93     1 0.636   3.85
 7.04 Intr - 182958 182813  146  2  2   71   76    79 0.075   4.01
 7.03 Intr - 221009 220878  132  1  0   55   32   136 0.004   3.54
 7.02 Intr - 223637 223531  107  2  2   86   94    49 0.247   3.39
 7.01 Init - 233736 233644   93  0  0   94   73    33 0.079   1.38

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  54643  54533  111  1  0   96   46    67 0.815   0.88
S.002 Intr + 137077 137237  161  0  2   72   88   120 0.825   8.26
S.003 Term - 139810 139689  122  2  2   88   43   149 0.873   8.06
S.004 Sngl + 213841 214098  258  0  0   42   32   244 0.909   9.08


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:221602415_221839744|GENSCAN_predicted_peptide_1|64_aa
MTALKNPVPEWGGECYKITLSAKGEAASSLDASSAFESAQYGVMITVKGLVEETDFAESL
LDGG

>gi568815597r:221602415_221839744|GENSCAN_predicted_CDS_1|195_bp
atgactgcgctgaaaaaccctgtgcctgagtggggaggagagtgttacaaaataacattg
tcagccaagggtgaagctgcatcaagcttggatgccagctctgcatttgagagtgcgcag
tatggagtaatgataactgttaaaggtttggtggaagagacagactttgcagagagcttg
ttggatgggggttaa

>gi568815597r:221602415_221839744|GENSCAN_predicted_peptide_2|107_aa
METLGGSRKRGLIIELLKEKMGGNLKSISRRSLCPEFLSVLEVVQSMEIVVGRRVKGEVM
GQRDEETILMLILFLSGGLQTGGISLSIEIQDLKNILSNSYTKALRF

>gi568815597r:221602415_221839744|GENSCAN_predicted_CDS_2|324_bp
atggagacactgggtggcagcagaaaaagaggtttaatcatagagctgttgaaagagaag
atgggaggaaacctcaaatccatctctcgaaggagtttgtgtccagagtttttaagtgtt
ttggaagtggtccaaagtatggagatagttgttggtcgaagagtgaagggtgaagtcatg
ggacaaagagatgaagaaactattctcatgctgattctgttcctctctgggggtcttcaa
actggtggcatcagcctttccattgaaattcaggatctgaaaaacatcttaagcaattct
tacacaaaagccttaagattctaa

>gi568815597r:221602415_221839744|GENSCAN_predicted_peptide_3|79_aa
MTFKKRTEGSRRTNHAEMQDEEDGSINIIIIIIIIIINMQCKAPKGLGPQGWCTPFESSD
RLSSHFLAFYLYQSILTLL

>gi568815597r:221602415_221839744|GENSCAN_predicted_CDS_3|240_bp
atgacattcaagaagcgaactgaaggaagcaggagaacaaaccatgcagagatgcaggat
gaagaggatggctccatcaacatcatcatcatcatcatcatcatcatcatcaacatgcag
tgcaaagcccccaaggggctggggcctcagggttggtgtactcccttcgaaagctcagac
aggctttcttctcatttcttagcattctatctgtatcagtccattctcacactactataa

>gi568815597r:221602415_221839744|GENSCAN_predicted_peptide_4|338_aa
MIPQQLREDPTLNDWCHGVIIRKPCDDTGVHRGSPCEDKSGDWSDTATNQETPKELWQSP
EARSKHEIDHSSLPSEVTNPVNTLTSDVWTLEFCLQQKSKSNISYSIVAISGRFWKQCFL
NCFMSPHCQTYKLLIALLEGLNEQAWPKTTQSLDVLPVELGREGTEAGILLRRFHRSRNQ
GGKMERAPLTVTHSDPQQNLFFLFSTLDSAGLEVLVPKGEMLLLGDTAMIPLRWKLILPA
ADFGLLMLKNQQAKSDIGVLAGMTGEIGLLPDYRSKKKCAWNSRSYLILSSLVITFVAVT
NKGFGHQGAKADGIPLMQAFPDAKGMIFAGEDDSIVRI

>gi568815597r:221602415_221839744|GENSCAN_predicted_CDS_4|1017_bp
atgataccacaacagcttagggaggaccctacgttgaatgactggtgtcatggtgtcatt
ataaggaagccatgtgatgacacaggagtacacagaggaagtccatgtgaagacaaaagt
ggagattggagtgatacagccacaaaccaggaaacaccaaaagaattatggcaatcacca
gaagcaaggagcaagcatgaaatagatcattcctcattgccttcagaggtgacaaaccct
gtcaacaccttgacttcagatgtctggactctagaattttgtttacagcaaaagagcaaa
tctaatatcagttattccatagtggctataagtggaagattttggaaacagtgcttcttg
aattgtttcatgtctccgcactgtcagacatacaaattactgatagccttgttggaagga
ttgaatgagcaagcttggcccaagactactcagtctctggatgtgttgcccgtggagctt
ggacgagaaggcacagaagcaggaatcttgctcagaagatttcatagatccaggaatcaa
gggggaaaaatggaaagggctcctcttactgttacccatagtgatccacagcaaaattta
ttctttctattctcaactttagactctgctggtctagaagttctggtccccaagggagag
atgcttctactaggagatacagcaatgattccattaagatggaagttgatactccctgct
gccgactttgggctccttatgctaaagaatcaacaagcaaagtcagatattggtgtattg
gctgggatgactggggaaattggattactaccagattataggagtaagaaaaagtgtgcc
tggaattcaagatcatatcttatactctcaagtcttgtaattacttttgttgctgtaacg
aacaaaggatttggtcaccaaggcgcaaaggcagatgggatccccttaatgcaagccttc
cccgatgcaaaaggaatgatatttgcaggagaggatgacagcattgtgagaatataa

>gi568815597r:221602415_221839744|GENSCAN_predicted_peptide_5|773_aa
MVTHIWLRINLFKYFTEFDYFRQQTLHKILSYVRLSDVYVMPVVTLICPENNYMNMPLLL
SILLGLESEVDLQTPSNQGNFPAVSLMRIFSGLGKGRLAPPPTLLPDQELRPATWRRPKS
GERGEAASPPPRSSGPIQSSYLHSALALFRQLRLFQKRRAAGPGLGRGRAGPRGGGRGMW
GGSCLVVEGRGDSSVFLWEIFWARLDGFTGSMYARPSAAGMQKKWYVDPGRVLPGNTIAK
TFTAWSNRETVIASGIELALQKKYYAREGGLTPSLPSKGSNSHPPVIATTVVSLKAANLT
YMPSSSGSARSLNCGCSSASCCTVATYDKDNQAQTQAIAAGTTTTAIGTSTTCPANQMVN
NNENTGSLSPSSGVGSPVSGTPKQLASIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRP
FMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKRIFSKEIIVYDEN
TNEPSRVMPSQPLHIVLESLKREGKEPLVLKDINYKISSQSSFYAAKTEYLRLSNLQRTI
GYLAYGSGSCEVQEQGANIWQGGLSSFKQNHENLCDNSLQLQECREVGGGASAASSLLPQ
PIPTTPDIENAELTPILPFLFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKGLFN
YKRLPATDSNKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRM
TMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDLNNGVTPRILTPKLMGVETVV

>gi568815597r:221602415_221839744|GENSCAN_predicted_CDS_5|2322_bp
atggtcactcatatttggctcagaataaatctcttcaaatattttacagagtttgactat
tttcgacaacagacgttacacaaaatcctctcctatgtaagactatcggatgtgtacgtg
atgcccgtcgtaacactgatctgccctgaaaacaattacatgaatatgcccctgctactc
agtatactactaggcttggagtctgaagtagacctccaaaccccatccaatcagggcaac
tttcctgcagtttccctaatgagaatattttccggactaggcaaggggcggcttgccccg
ccccctactcttctccctgatcaggagctgcggccagctacctggcgccggccaaagtca
ggggagcggggagaggcggcgtcacctcctccacgctcctccggccccattcaatctagc
tatttgcactcggctctggctcttttccgccagctgcggctgttccagaagcgccgggct
gccggtcctggcctcggcaggggccgtgcgggaccgaggggtggcggccgaggcatgtgg
ggcggctcttgcctagtggtggaagggagaggggatagctcagtatttctctgggagatt
ttctgggccagactggatggtttcacgggcagtatgtacgcccgaccctctgctgcaggg
atgcagaagaaatggtatgttgatcctggacgtgtcctaccaggtaacacaatagcaaag
actttcaccgcttggtccaaccgggaaacagttatagcttctggaatagaactcgctctt
cagaaaaaatactacgcaagggaaggggggttgactccttcgctcccatccaaaggcagt
aacagccaccctcctgtcatcgccaccaccgttgtgtccctcaaggctgcgaatctgacg
tatatgccctcatccagcggctctgcccgctcgctgaattgtggatgcagcagtgccagc
tgctgcactgtggcaacctacgacaaggacaatcaggcccaaacccaagccattgccgct
ggcaccaccaccactgccatcggaacctctaccacctgccctgctaaccagatggtcaac
aataatgagaatacaggctctctaagtccatcaagtggggtgggcagccctgtgtcaggg
acccccaagcagctagccagcatcaaaataatctaccccaatgacttggcaaagaagatg
accaaatgcagcaagagtcacctgccgagtcagggccctgtcatcattgactgcaggccc
ttcatggagtacaacaagagtcacatccaaggagctgtccacattaactgtgccgataag
atcagccggcggagactgcagcagggcaagatcactgtcctagacttgatttcctgtagg
gaaggcaaggactctttcaagaggatcttttccaaagaaattatagtttatgatgagaat
accaatgaaccaagccgagtgatgccctcccagccacttcacatagtcctcgagtccctg
aagagagaaggcaaagaacctctggtgttgaaagatatcaactataagatttcgtcacaa
agttcattttatgctgctaaaacagaatacctgagattgagtaatttacaaagaaccata
ggttatttggcttatggttctggaagctgtgaagtgcaagagcagggtgccaacatctgg
caaggtggacttagtagttttaagcagaaccatgaaaacctctgtgacaactccctccag
ctccaagagtgccgggaggtggggggcggcgcatccgcggcctcgagcttgctacctcag
cccatccccaccacccctgacatcgagaacgctgagctcacccccatcttgcccttcctg
ttccttggcaatgagcaggatgctcaggacctggacaccatgcagcggctgaacatcggc
tacgtcatcaacgtcaccactcatcttcccctctaccactatgagaaaggcctgttcaac
tacaagcggctgccagccactgacagcaacaagcagaacctgcggcagtactttgaagag
gcttttgagttcattgaggaagctcaccagtgtgggaaggggcttctcatccactgccag
gctggggtgtcccgctccgccaccatcgtcatcgcttacttgatgaagcacactcggatg
accatgactgatgcttataaatttgtcaaaggcaaacgaccaattatctccccaaacctt
aacttcatggggcagttgctagagttcgaggaagacctaaacaacggtgtgacaccgaga
atccttacaccaaagctgatgggcgtggagacggttgtgtga

>gi568815597r:221602415_221839744|GENSCAN_predicted_peptide_6|112_aa
MESHGRKDLMHRAGGLLVHTPQEGDGKVQAVLGGSDHLCGKLFIGISHMLEKINTGQSVC
QGDKHQEMHAFENYKKEDVEREKEDTFILLKLSEQEEEFFLNIEDNHNCKEH

>gi568815597r:221602415_221839744|GENSCAN_predicted_CDS_6|339_bp
atggagagccatggtaggaaggatctgatgcatcgggctggaggcctgcttgttcatact
ccgcaagaaggagatggcaaagtccaggctgtcctaggtggcagcgaccacctgtgcgga
aagctatttattggcatcagtcacatgctagagaaaataaacactggacaatccgtctgt
cagggagataaacaccaggaaatgcatgcctttgagaattacaagaaggaagatgttgaa
cgagaaaaggaagataccttcatcctcctgaaactcagtgaacaagaagaggaatttttt
ctaaacattgaagacaatcataattgcaaagagcattga

>gi568815597r:221602415_221839744|GENSCAN_predicted_peptide_7|462_aa
MPHALGGCLLCSKTTGSLASGFWFAEDWQSEEWEHADGQVQEPGQALLGSGSMVASRGGC
LQLPKPSGFSRPVVLTQSVVPGPAASASPESLLEMQILKPTQDLLNQKLSGWLANYHKKV
DMWLSVQKSTTAMIHYHYAVTCTVNTARKSIPVIEKENAGIMTLFFKEEWLVWPLRGFLE
CSSTFLPAESRSVTETLGASVSLLVNEDISHSSIINLLWSENTDARSCRQDMFLSKTPMN
QCCGQGMFDTWTVLQDLNKYWPPPEKGEKGKPVLEKRLEVGQVEGPAASGDNPSATVQPG
GTGQFAVGQRPDDIMQFHFSFPKVNWVKGCTLSRQLHATVVTQVTPSECESKLLKGMASS
CKAEGKAEESWTLSFVQIKLLFTQDLLKEYKEMAEIALSSHSSSGKRPFIVLRLVPAVTG
PIGFEHKTTEFGTSEEFWIWYKKIQVQIPVVLKFRYTMIIAF

>gi568815597r:221602415_221839744|GENSCAN_predicted_CDS_7|1389_bp
atgccccatgccctagggggctgcctcctgtgtagcaaaactacaggctctcttgcctct
ggcttctggtttgcagaagattggcaaagtgaggagtgggagcatgcagacgggcaggtg
caagagccaggacaagcacttttgggctcaggctccatggtagcatctaggggtgggtgc
ctgcaactcccaaagcccagtggtttctctcgtcccgtggttctcactcaaagcgtggtc
cctggaccagcagcatcagcatcacctgaaagtttgctagaaatgcaaattctcaagcca
acccaagacctactgaatcagaaactctcgggatggcttgccaactatcacaaaaaggta
gatatgtggctaagtgttcagaaatcaacaacagccatgatccactatcactatgctgtc
acatgcaccgtaaatacagcaagaaaatctatcccagttattgaaaaggagaatgcaggg
ataatgacactgtttttcaaagaggagtggcttgtgtggcctctcagaggtttcctggaa
tgtagctccacatttctgccagctgaatctaggtcagttactgaaactcttggagcctca
gtttccttgcttgtaaatgaggatatcagtcattcttccatcatcaatttgttgtggtca
gagaacacagatgcccgttcttgtagacaagatatgtttctttcaaaaacgccaatgaat
cagtgttgtggccaaggtatgtttgacacctggacagtgctgcaggacctcaacaaatac
tggcccccaccagagaagggggagaaaggaaaaccggttctggagaagaggctagaggtg
gggcaggttgagggtccagctgcatcaggtgacaatccctctgcaactgtgcaacctgga
gggacagggcagtttgcagttgggcaacggccagatgatatcatgcagtttcacttcagt
ttccccaaagtgaactgggtcaaaggttgtacattgtcacgtcagctgcatgctactgtg
gtcacacaggtcaccccgagtgaatgtgagagcaaactgctcaagggtatggcttcaagc
tgcaaagctgaaggcaaagctgaagaatcctggacactctcctttgttcaaataaaactt
ctatttacacaggatttgctaaaggagtacaaggaaatggcagagatagcattaagctca
cacagcagttccggaaagcgccccttcattgttctcaggctcgtacctgcagtaacaggg
cctataggctttgaacacaagacaactgagttcggaacctcagaagaattctggatatgg
tacaaaaaaattcaggttcaaattcctgttgtgctcaagtttagatatacgatgatcatt
gctttttaa