GENSCAN 1.0	Date run:  6-Nov-116	Time: 22:32:12

Sequence gi568815592r:158536830_158741362 : 204533 bp : 46.32% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -   2830   2714  117  0  0   15  105    83 0.149   2.28
 1.01 Init -   4943   4765  179  2  2   76  105    91 0.713   8.33
 1.00 Prom -   5458   5419   40                              -4.96

 2.00 Prom +  15811  15850   40                              -5.46
 2.01 Init +  23260  23403  144  0  0   32   78   247 0.172  16.22
 2.02 Term +  24823  24912   90  0  0   70   54    47 0.087  -2.78
 2.03 PlyA +  25087  25092    6                              -0.45

 3.00 Prom +  25337  25376   40                              -4.76
 3.01 Init +  28194  28324  131  2  2   86   20   173 0.451   8.00
 3.02 Intr +  36591  36694  104  0  2  112   94   206 0.804  23.42
 3.03 Intr +  48475  48596  122  2  2  117   84   115 0.987  14.21
 3.04 Intr +  52843  52953  111  0  0   77   98   106 0.977  11.08
 3.05 Intr +  68438  68518   81  1  0   53   74   102 0.348   5.13
 3.06 Intr +  70415  70514  100  1  1   62   64    43 0.581  -1.02
 3.07 Intr +  71504  71634  131  0  2   83   99   187 0.806  19.71
 3.08 Intr +  73100  73174   75  1  0   55   70    75 0.556   2.11
 3.09 Intr +  88275  88377  103  2  1  114  106    61 0.681  10.25
 3.10 Intr +  92895  92990   96  1  0   69  103    37 0.904   3.28
 3.11 Intr +  94494  94560   67  1  1   65  106    96 0.995   7.06
 3.12 Term +  94981  95059   79  1  1   51   52   198 0.999   9.74
 3.13 PlyA +  96243  96248    6                               1.05

 4.08 PlyA -  96292  96287    6                               1.05
 4.07 Term - 100068  99998   71  1  2  143   43    76 0.995   6.70
 4.06 Intr - 101065 100942  124  1  1   91   20    80 0.960   1.66
 4.05 Intr - 104531 104490   42  2  0  119   94    33 0.907   5.44
 4.04 Intr - 117724 117555  170  2  2  108    1    82 0.014   1.17
 4.03 Intr - 118489 118437   53  0  2   72   89    18 0.381  -1.15
 4.02 Intr - 119527 119346  182  1  2   73   76    56 0.357   1.57
 4.01 Init - 122912 122820   93  2  0   51   61    92 0.367   3.18
 4.00 Prom - 125164 125125   40                              -8.06

 5.00 Prom + 125425 125464   40                              -6.56
 5.01 Init + 126440 126549  110  1  2   80   78    84 0.963   6.29
 5.02 Intr + 128512 128784  273  1  0   62  115   208 0.935  17.55
 5.03 Intr + 146096 146160   65  2  2  103   84    71 0.472   6.56
 5.04 Term + 154033 154115   83  2  2   69   35    89 0.359  -0.44
 5.05 PlyA + 154353 154358    6                               1.05

 6.00 Prom + 163132 163171   40                              -6.46
 6.01 Init + 166395 166555  161  2  2   61   28   216 0.511  10.25
 6.02 Intr + 171493 171562   70  1  1   84   59    85 0.982   4.38
 6.03 Intr + 176241 176378  138  2  0   82   64    61 0.930   3.76
 6.04 Intr + 176971 177049   79  0  1  101  106    58 0.814   8.02
 6.05 Term + 181258 181391  134  2  2  101   52    67 0.426   2.65
 6.06 PlyA + 183267 183272    6                               1.05

 7.03 PlyA - 184571 184566    6                               1.05
 7.02 Term - 189154 188940  215  2  2   58   38   163 0.793   5.69
 7.01 Intr - 204169 204059  111  2  0   67   47    80 0.166   2.15

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  80093  79050 1044  2  0   43   41   272 0.991  15.15
S.002 Init - 107879 107853   27  2  0   81   76    33 0.857   1.07
S.003 Term - 117724 117480  245  2  2  108   53    99 0.859   4.46
S.004 Sngl + 139149 139802  654  2  0   86   54   179 0.964  10.49


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:158536830_158741362|GENSCAN_predicted_peptide_1|99_aa
MRPSDMLTSKSVQMRQEITLALNKKHGSQTFKPECNLIKGVKAERTVGQHGGVETEHEPS
KYANSHAAEQRGQSCFVNGALAAVFFASPCYEKTANHVS

>gi568815592r:158536830_158741362|GENSCAN_predicted_CDS_1|297_bp
atgaggccctctgatatgcttacatcaaaatcagtacagatgcgtcaggaaataacgttg
gccttaaataaaaaacatggctcccagacctttaaacctgaatgtaacctgatcaaaggt
gtcaaagcagaaaggacggttggccagcatggaggcgtggaaacggaacatgagccaagc
aaatatgcaaacagccatgctgctgaacagaggggccaatcatgttttgtaaacggagct
ttagcagctgtgttctttgcttcgccctgttatgagaaaactgccaaccacgtgagn

>gi568815592r:158536830_158741362|GENSCAN_predicted_peptide_2|77_aa
MSFPRPAAAQPLSLRLRLRLPLPRLLRGAWRARDARAGAEGSGRRDGADRELDQRKQLTK
ERSRGGQAKRSLNFVRV

>gi568815592r:158536830_158741362|GENSCAN_predicted_CDS_2|234_bp
atgagttttccgcggccggccgctgctcagccgctgtcgctccggctccggctgcggctg
ccgctgccgaggctgctgcgcggcgcctggcgggctcgggacgcgcgggccggggccgag
ggctctgggcgccgagatggagccgacagggaactagaccaaagaaagcagttgaccaag
gaaaggtcccgaggaggacaagcaaaacgcagcttgaattttgtgcgagtttga

>gi568815592r:158536830_158741362|GENSCAN_predicted_peptide_3|399_aa
MKVSLTPLGPLLRMLVLLGSVEVGMLVLASLTSLSLSLQDSNLRLAPMRLYTLSKRHFVL
VFVVFFICFGLTIFVGIRETSIKTSFPMTVKVDGVAQDGTTMYIHNKVHNRTRTLTCAGK
CAEIIVAHLGYLNYTQYTVIVGFEHLKLPIKGMNFTWKTYNPAFSRLEIWFRFFFVVLTF
IVTCLFAHSLRKFSMRDWGIEQKWMSVLLPLLLLYNDPFFPLSFLVNSWLPGMLDDLFQS
MFLCALLLFWLCVYHGIRVQVEEYVRTAMRPTDVGKVLQQGFHGQGMKVFFMVVAAVYIL
YLLFLIVRACSELRHMPYVAPPAEFLSFYGLLNFYLYTLAFVYSPSKNALYESQLKDNPA
FSMLNDSDDDVIYGSDYEEMPLQNGQAIRAKYKEESDSD

>gi568815592r:158536830_158741362|GENSCAN_predicted_CDS_3|1200_bp
atgaaggtgtctctcacaccccttgggcccctgctgcggatgctggtgttgctgggttct
gtagaagtgggaatgctggtgctggcttccctcacatctctgtccctctcgctgcaggac
agcaatttgaggctggcgcccatgcggctctacacgctctccaagcgccactttgtcctc
gtgtttgtcgtcttcttcatctgctttggcctgaccatcttcgttgggatcagagaaact
tctattaagacaagctttcccatgactgttaaagtcgatggtgtagctcaagatggaacc
acgatgtacattcataacaaagttcacaaccggacaaggaccctcacatgtgcagggaaa
tgtgcggagattattgtggctcaccttggctacctgaactacactcagtatacagtgata
gtgggatttgaacacctgaagctccccatcaagggaatgaacttcacatggaagacttat
aaccctgccttctcccggttggaaatctggttccggtttttctttgtggtgctcaccttc
atcgtcacttgcctgtttgcgcattccctccggaaattttccatgagagactggggcatc
gagcagaagtggatgtctgttctcctgcctctgctgctactttacaatgatccgttcttc
cccctctccttcctggtcaacagctggctcccagggatgctggatgacctctttcagtcc
atgttcctgtgcgccctgctgctcttctggctgtgcgtgtaccacgggattcgtgtccag
gtggaggagtacgtcaggactgccatgaggcccaccgacgttgggaaagtacttcagcag
gggttccatggccagggaatgaaggtcttcttcatggtggtggcagcggtgtacattctg
tacctcttgttcttgatagtgcgggcgtgttccgagctacgtcacatgccttatgtggca
ccaccagccgagttcttatctttctatggcctgttgaacttctatctctacaccttggcc
tttgtatattctccatcgaagaatgccctctatgagtcccagctgaaagacaatcctgcc
ttctccatgctgaatgactcggatgatgatgtgatttatgggagtgactatgaggaaatg
ccgctgcagaacggccaggccatccgggccaagtacaaggaggagtcagatagtgactga

>gi568815592r:158536830_158741362|GENSCAN_predicted_peptide_4|244_aa
MKSQDAVYSFNTLKEIQKDILKMQTTKTIAQANDHMQPPRAAVMLLNGPRGRGRLTGDRK
GQDTCLAETPPPGLGEEGSCVRIGKEEKASLGAGSPYSSTAGSKDGQGARRPKSRKLSHC
SGIGRDAGSHGENFNLGVSIGLYLVMLYPSGTSASRQTQFGYGIECTAFVVDEVSNIVKE
AIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLGKPFKYIGSCTVRWENKTMYCIVSAF
GLSI

>gi568815592r:158536830_158741362|GENSCAN_predicted_CDS_4|735_bp
atgaaaagtcaagatgctgtctatagctttaatacactgaaagaaatacagaaagacatc
ctcaaaatgcaaacgactaagacaattgcccaggcaaacgaccacatgcaaccacccaga
gcagcagtgatgttgctgaatggaccacgaggaagaggaagactgacaggtgacaggaaa
ggacaggacacctgcctggctgagacgccaccgccaggcctgggagaagaggggagttgt
gtgaggattggaaaggaggagaaggcatctctaggggcaggaagcccatattcaagtaca
gcaggaagtaaggacgggcagggggcaagaaggcccaagagtaggaagttaagccactgt
tctgggattgggagggacgcgggcagccatggggaaaacttcaatctaggtgtttccatt
ggtctttatctggtcatgctgtatcccagtggaacttcggcatccagacaaacacagttt
ggttacggcattgagtgtactgcttttgttgttgatgaagtgagcaacattgtaaaagag
gctatagaaagcgcaattggtggtaacgcttatcaacacagcaaagtgaaccagtggacc
acaaatgtagtagaacaaactttaagccaactcaccaagctgggaaaaccatttaaatac
atcgggagctgcactgtgcgatgggagaataagaccatgtactgcatcgtcagtgccttc
ggactgtctatttga

>gi568815592r:158536830_158741362|GENSCAN_predicted_peptide_5|176_aa
MAQEIDLSALKELEREAILQVLYRDQAVQNTEEERTRLGSGVPSNTIFFNSEGCRKLKTH
LQHLRWKGAKNTDWEHKEKCCARCQQVLGFLLHRGAVCRGCSHRVCAQCRVFLRGTHAWK
CTVCFEDRNVKIKTGEWFYEERAKKFPTGGSSPGQPGIITFCASIHGHLAIRAEGF

>gi568815592r:158536830_158741362|GENSCAN_predicted_CDS_5|531_bp
atggcccaagaaatagatctgagtgctctcaaggagttagaacgcgaggccattctccag
gtcctgtaccgagaccaggcggttcaaaacacagaggaggagaggacacgcctggggtca
ggtgttccatctaatactatcttctttaactctgagggctgcaggaaactgaaaacacac
ctgcagcatctccggtggaaaggagcgaagaacacggactgggagcacaaagagaagtgc
tgtgcgcgctgccagcaggtgctggggttcctgctgcaccggggcgccgtgtgccggggc
tgcagccaccgcgtgtgtgcccagtgccgagtgttcctgagggggacccatgcctggaag
tgcacggtgtgcttcgaggacaggaatgtcaaaataaaaactggagaatggttctatgag
gaacgagccaagaaatttccaactggaggaagctccccaggacaacctggcatcatcacc
ttctgtgcctccatccacgggcatttggcaatccgtgcagagggtttttaa

>gi568815592r:158536830_158741362|GENSCAN_predicted_peptide_6|193_aa
MLRAVPGRHGCQPAMCLRQALAASDLGPGLQLFLSLAKTGIPAKVTRQPDRAGCKISVVP
PTPPPVSESQCSRSPGRFQTETGVTFKILLYFLLEISNSPESFQYLRAHDVFIGQMDDWM
GGNLQEFGQFRGFNKSVENLFLSLATHVKKLSKSQNDMTSEKHLLATGPRQCVGQTERRS
QSDTAVNVTTRVP

>gi568815592r:158536830_158741362|GENSCAN_predicted_CDS_6|582_bp
atgctccgcgccgtgcctggcagacacggctgccaaccagccatgtgcctgagacaagcc
ctggcagcctcagacctgggccctggcctgcagctgttcctgtccctggcaaagacgggt
atccctgctaaagtcactcgccagccagaccgggcagggtgcaaaatttctgtggttcct
cctactccacctcctgtcagcgagagccagtgcagccgcagtcctggcaggtttcaaact
gagactggggtgaccttcaaaatcctgctctactttctcctggaaatttcaaattctcca
gagtcgttccagtacctacgtgctcatgatgtatttattggacagatggatgattggatg
ggtggtaatttacaggaatttggtcagtttagaggatttaataagtccgtggaaaatttg
tttctgtctcttgctacccacgtgaaaaagctctccaaatcccagaatgatatgacttct
gagaagcatcttctcgccacgggccccaggcagtgtgtgggacagacagagagacggagc
cagtctgacactgcggtcaacgtcaccaccagggtaccctga

>gi568815592r:158536830_158741362|GENSCAN_predicted_peptide_7|108_aa
XYYFFKHCENFVQGKHNQKDAENAFQEFIESQSTDFYAPTTWKKLTGALLPYLFTRVAEC
CIIESYRALVEWIDNESADTPGVTPRHRPEDNATLLKPVEAFKEWKDG

>gi568815592r:158536830_158741362|GENSCAN_predicted_CDS_7|327_bp
nactactacttcttcaagcattgtgagaactttgtgcagggaaaacacaaccagaaggat
gcagaaaatgctttccaagagttcattgaatcccaaagcacagatttttatgctccaacc
acttggaagaagctgaccggcgccctcctgccctatctgtttacgcgagttgcagaatgc
tgcattatagaaagctacagagcactggtggagtggattgataatgaatctgctgacaca
cctggagtaactccaagacacaggcctgaggataacgcaactttactaaaacctgtggaa
gcctttaaggaatggaaggatggataa