GENSCAN 1.0	Date run:  5-Nov-116	Time: 02:52:59

Sequence gi568815595r:16488663_16698599 : 209937 bp : 40.42% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -   5303   5063  241  2  1   92  105   128 0.405  11.10
 1.01 Init -  10847  10611  237  2  0   95   53   109 0.548   6.16
 1.00 Prom -  11196  11157   40                              -2.95

 2.00 Prom +  12645  12684   40                              -2.95
 2.01 Init +  17785  17809   25  0  1   76   98    34 0.627   2.94
 2.02 Intr +  23834  24391  558  0  0   34   20   376 0.847  17.27
 2.03 Intr +  24449  24897  449  0  2   89   80   230 0.606  14.44
 2.04 Term +  29565  29684  120  2  0   29   43   124 0.598  -0.51
 2.05 PlyA +  30579  30584    6                               1.05

 3.05 PlyA -  31134  31129    6                               1.05
 3.04 Term -  34314  34212  103  2  1   76   52   132 0.534   5.17
 3.03 Intr -  35560  35369  192  0  0   87   25   116 0.388   2.89
 3.02 Intr -  55963  55790  174  0  0   73   37   181 0.274   9.63
 3.01 Init -  59496  59111  386  0  2   80   86    97 0.820   5.06
 3.00 Prom -  71843  71804   40                              -3.75

 4.16 PlyA -  73249  73244    6                               1.05
 4.15 Term -  78716  78396  321  2  0   40   55   183 0.004   4.04
 4.14 Intr - 103486 103388   99  1  0   51   86    61 0.332   1.59
 4.13 Intr - 108171 108088   84  0  0   83  110    64 0.724   7.20
 4.12 Intr - 108879 108828   52  2  1   70  100    16 0.762  -1.01
 4.11 Intr - 109516 109425   92  1  2   88   96    77 0.767   6.37
 4.10 Intr - 109936 109790  147  1  0   68   34   149 0.973   7.01
 4.09 Intr - 115857 115778   80  1  2   57   73    79 0.695   1.65
 4.08 Intr - 116391 116211  181  0  1   38   33   148 0.658   2.82
 4.07 Intr - 116741 116541  201  2  0   73  101   118 0.885  10.16
 4.06 Intr - 123078 122975  104  1  2   61   77    64 0.189   1.57
 4.05 Intr - 138551 138291  261  0  0   32   76   140 0.043   3.74
 4.04 Intr - 149401 149223  179  0  2   23   87   110 0.118   3.04
 4.03 Intr - 155954 155822  133  0  1   40  105   107 0.115   6.38
 4.02 Intr - 157784 157634  151  2  1   84   92     8 0.114  -0.39
 4.01 Init - 168174 168091   84  0  0   63   72    96 0.727   6.37
 4.00 Prom - 172203 172164   40                              -5.75

 5.00 Prom + 179996 180035   40                              -4.55
 5.01 Init + 186261 186355   95  2  2   66   50    50 0.220  -1.10
 5.02 Term + 188964 189282  319  0  1   53   54   240 0.499  10.47
 5.03 PlyA + 189402 189407    6                               1.05

 6.00 Prom + 190382 190421   40                              -5.45
 6.01 Sngl + 191331 193625 2295  2  0   70   47   643 0.915  51.17
 6.02 PlyA + 194082 194087    6                               1.05

 7.03 PlyA - 194282 194277    6                               1.05
 7.02 Term - 204243 204083  161  1  2   17   47   175 0.885   3.42
 7.01 Init - 204904 204862   43  1  1   78  102    37 0.587   4.73

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:16488663_16698599|GENSCAN_predicted_peptide_1|160_aa
MACWQDGQQVGPGCRFLSTWAPLWGYLSFLMAWWLDSTSRHPKSQGVNALKFLKAGSRNW
NCVIPSYSIGQAILEPRFRENYGIFYTRVFKDKISEKNHLPAFFLWPAAAEMGCGLNKLE
KRDEKRPGNIYSTLKRPQVETKIDVSYEYRFLEFTTLSAX

>gi568815595r:16488663_16698599|GENSCAN_predicted_CDS_1|480_bp
atggcctgctggcaagatggccagcaagttggtcctggctgtcggttcctctccacatgg
gcccctctttggggctacttgagcttcctcatggcatggtggctggattccacgagcagg
caccccaaaagtcagggagtaaatgctctcaagtttcttaaagctgggtccagaaactgg
aactgtgttattccgtcatattctattggtcaagccatcctggagcccagattcagggaa
aattacggcatcttttatactagggtgtttaaagacaaaatctcagaaaaaaatcacctc
cccgcctttttcctttggccagcagctgctgaaatgggttgcggattgaacaagttagag
aaacgtgatgaaaaacggcctgggaatatttattcaactttgaagaggcctcaggtggaa
accaagatagatgtgtcctatgaataccgcttcctggagttcacgactctgagtgctgnn

>gi568815595r:16488663_16698599|GENSCAN_predicted_peptide_2|383_aa
MTAGNPDDRITHNHTGQLRASTESQTDSRERAWFYNLGLHAVLAAKGSDTGGEGHQPWPR
TGVRVPDNGASRNTQPPPPRPDPYPSWRPLSLEKWVKTREENPLQKRRSPFSVLGTLGTR
VPVLLVVPALPRSARHVCSYTSSTSVPRANPPPRAHAEGQSGTASTLPHPGRAHPGNLDS
ATSSLLFFSEDPSGSASEPAEPTTPNRLLRSASPYIAPGMTPLHPFPAKKSWPKIQASQG
SAQVPIRRGPGGAALAAPEPRQRATCREAPRAVPTTRQRPGPWGQTEGPVPVDTPSPVAP
PPPPTVWDRRRRRRGRGLPEAACSVPGGKFVPYRGGGAGRTWAPYLRTLWTAVQLLGFVQ
EEHYRPSVEEGNRLFILPIDAGQ

>gi568815595r:16488663_16698599|GENSCAN_predicted_CDS_2|1152_bp
atgacagcagggaacccagatgacaggatcacccataaccacacagggcagctgagggca
agcacagagtcacagacagacagcagggagcgtgcctggttctacaaccttggcctccac
gcggttcttgctgccaaaggcagcgacaccggaggtgaagggcaccagccctggcctagg
actggggtgcgcgtgcctgacaacggggcttcccgaaatacacaaccacctcctcctcgc
ccagacccatatccatcctggcgtcccttgagtctagagaagtgggttaagacaagggaa
gaaaatcccttacagaagaggagatccccgttttcagtgctggggactctcggcacccgc
gtccctgtgcttctggtggttccggcgcttcctcggagcgcgcggcatgtctgctcctac
acgtccagcacctctgtccccagagcaaacccacctcccagggcacacgcagaggggcag
tcaggcaccgcctccaccctgccccacccaggccgcgcgcaccccggaaacctggactcc
gcgaccagctccctcctgttcttttccgaggaccccagcggcagcgcttctgagcctgca
gagcctacgacccccaacaggctgctccgaagtgcctctccctacatcgctccaggaatg
actcccctacacccgttccccgcaaaaaaaagttggcccaagatccaggcgtcccaagga
tcagcccaggtccccatccgacgcgggccagggggtgctgctctggcagctccggagccc
cggcaaagagcaacctgcagggaggcgccacgcgcggttcccactacccgccagagaccc
ggtccatggggccaaacggaggggcctgtgccggtcgacaccccaagccctgtcgcgccc
cccccgccgcctaccgtatgggaccggcggaggagaaggcgcggtcgcgggctccctgag
gcagcgtgttccgtcccgggaggaaagtttgtgccatacagaggaggcggcgcggggagg
acttgggcgccgtatctgagaaccctgtggacagctgttcagctcttgggatttgtgcag
gaggagcattatagaccttcagtagaggaaggaaacaggctgttcatccttcccattgac
gctggacaatga

>gi568815595r:16488663_16698599|GENSCAN_predicted_peptide_3|284_aa
MAATAPSITLSPSNIQMTETESLCDFFFFEIKENSSRSTSSRLLIDYNCGTCPILNSSLT
RETELQFWTQTDQGLHLETSMGSRFQELSAAQFLNRNHFLLTKKKVVITVELVTNSCCHN
CHLLLLASRSFTAAPQGDVGIAERIHCSQGALADGARAEEVFVDQWWRAQDSKDISEAQQ
WVAMETSSESQVLATAVDSPVDEHMWKSCGFPVFHHQEMGQHGHLWVIIVIPPIPRSAYL
PGICGTPLAVCPAAPSPSAMIENFLRPSPEADASAMLPVQPSEP

>gi568815595r:16488663_16698599|GENSCAN_predicted_CDS_3|855_bp
atggctgcaacagctccaagcatcacattatctcccagcaacatccaaatgacagaaaca
gaaagtctctgtgatttcttcttttttgagattaaggaaaactcttctagaagtacctcc
agcagacttctcattgactacaattgtggcacatgccccatcctgaactcatcactaaca
agggaaacagaactacaattttggacacagactgatcaaggtttacaccttgaaacttca
atggggtccagattccaagaactatctgctgctcagttcctgaacagaaatcattttcta
ttaacaaagaagaaggtggtaatcactgttgagttggtgaccaacagctgttgccacaat
tgtcatttacttctgttagcctcaagatctttcacagcagccccccagggggatgtggga
atcgctgagaggattcactgcagtcagggagcccttgctgatggggctagggcagaggag
gtcttcgtggaccaatggtggagagcacaggacagcaaggacatctcagaggcacaacag
tgggtggcgatggaaaccagctcagaaagccaagtcttggcaacagctgttgatagtcct
gttgatgaacacatgtggaaaagctgtggctttccagttttccaccatcaggaaatggga
caacatggacacttgtgggttatcattgtcattccacctatacccaggagcgcttatctg
ccaggaatatgtggcactccacttgctgtgtgccctgctgccccttcaccttctgccatg
attgaaaacttcctgaggccctcaccagaagcagatgccagtgccatgcttcctgtacag
ccttcagaaccatga

>gi568815595r:16488663_16698599|GENSCAN_predicted_peptide_4|722_aa
MLENVEVALELVNGQSLEEFGGLRRRQRPHWPLRSFLNSLGMPLRAMNLLFPLPGLLPHH
YSHKIVDRDSPPRTAPSSGVRQQTWVPFVKKLTVHFTRARKAEERSRGRWKSCQPSCGST
PISSFIKPIHFCLIIKAAFNLSTHGSRPLPLISTVPQHSLLLVFALSRSPSADVFLSATS
AKASSWSSSGCCPSKLHYHVQEGKEEGTTGKGLSLQEALAFYSESDTLGAPPRASACVSF
ISSVSFGPLDVTKARKIKRSAFTASVVETGSYNKNILNWVAYKQQKFVSHSSGDRQVQDQ
GVSMPDGPPFGAPQPCHPLLVFLFSSSLAPLTTRSRAAGSSGPHSSPRSGAPSTASAPPG
AGRELLPAAIMSWERRPGSGAAYTERQARDAKGGKVGVGPEDALPRRPRARATAFLRHPF
PGSGSLLAEVWAAGDLLMAAPSCGGDRKARLTPSLPHESTANPETPNSTISREASTQSSS
AATSQGYILPEGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYG
FVSFFNDVDVQKIVEFQNVWTNPNTETYMQPTTTMNPITQYVQKSVDRSIQTVVSCLFNP
ENRLRNSVVTQDDYFKSRRKTIRRVRSDTYGRLASGTRARRQGRSRWLQQSGISILDRMV
TAGLTQKVTNEQRLEIGQVGNHTDILGKSIADRGDSQCKGSEEKACLVIFRNSKLVSVVE
VE

>gi568815595r:16488663_16698599|GENSCAN_predicted_CDS_4|2169_bp
atgctggaaaatgtggaagtggctttggaactggttaatggtcagagcttggaagagttt
ggaggtctcagaagaagacagaggccacactggcctctgcggagttttctgaactcacta
ggcatgccactcagagctatgaatttgctattccctctccctggactactccctcatcac
tatagccataagatagtggatagagatagtcctccccggactgctccctcctcaggtgtt
cggcagcagacatgggtgccttttgtcaaaaagctaaccgtgcacttcactagagccaga
aaagctgaagaaagatccaggggcaggtggaaaagctgccagcccagctgcggttccaca
ccaataagctcatttatcaagcccatccacttctgcctgatcatcaaggccgccttcaac
ctgtccacccatgggagcagacccttaccactcatcagcacagtgcctcagcattctctt
ctccttgtctttgcactctccaggtctcccagtgctgatgtcttcctctctgctacttct
gccaaagccagttcatggtcctccagtggctgctgcccctccaagcttcactaccatgtc
caagaaggaaaagaggaagggaccacgggcaaggggctttctcttcaagaggctctggct
ttttattcagaaagtgacacactaggggctcccccaagggcttctgcctgtgtctcattt
atatcaagtgtgtcatttggtcccctagatgtaacaaaggctagaaaaatcaaacgttca
gcttttacagcctctgtagttgagacggggtcttacaataaaaatatcttaaactgggtg
gcttataaacaacagaaatttgtatctcacagttctggagaccggcaagtccaagatcag
ggtgtcagcatgcctgacggtccgcctttcggggctcctcagccttgtcacccgctcttg
gttttccttttctcttcatctttggctcctttgaccactcgaagccgcgcagcgggttcc
agcggacctcacagcagccccagaagtggtgcgccaagcacagcctctgctcctcctgga
gccggtcgggaactgctgcctgccgccatcatgagttgggagaggcggcctggcagtggc
gcggcctacacagagaggcaggcgcgggacgccaagggcggcaaggtgggggtgggcccc
gaggacgcgctgcctcgccggccacgtgcaagggccacggccttcttgaggcacccattt
cccggttcgggttctctactggcagaggtttgggctgcgggggacttgctgatggcggct
ccctcgtgtggcggcgacagaaaagctcgcctgacgccatctttgccgcacgagtctact
gcaaatcctgaaactccaaactcaaccatctccagagaggccagcacccagtcctcatca
gctgcaaccagccaaggctatattttaccagaaggcaaaatcatgccaaacactgttttt
gttggaggaattgatgttaggatggatgaaactgagattagaagcttctttgctagatat
ggttcagtgaaagaagtgaagataatcactgatcgaactggtgtgtccaaaggctatgga
tttgtttcattttttaatgacgtggatgtgcagaagatagtagaatttcagaatgtctgg
actaatccaaacactgaaacttatatgcagcccacaaccacgatgaatcctataactcag
tatgttcagaaatctgtggaccgaagcatacaaacggtggtatcttgtctgtttaatcca
gagaacagactgagaaactctgttgttactcaagatgactacttcaagtcaaggagaaag
acaataaggagagtaaggagtgacacatatggaaggttagcaagtggtactagagcaagg
aggcaagggagatccagatggcttcagcagagtgggatttccattttagatagaatggtc
acagcaggccttactcagaaagttacaaatgagcaaagacttgaaataggtcaagtagga
aatcatactgatatcttggggaagagcattgcagacagaggggacagccagtgcaaaggc
tctgaggaaaaagcatgcctagtgatcttcaggaacagcaagttggtcagtgtggttgaa
gtagagtga

>gi568815595r:16488663_16698599|GENSCAN_predicted_peptide_5|137_aa
MNCLPETQGQKYKLFSSSRPMDYRGRGAHVRLPKVDETTKIGKKQSRKTGNSKKQSASPP
PKECSSSLATEQNWTENDFDELREEGFRQSNYSEIQEEIQTKGKEVKNFEKNLDECITRI
TNTEKCLKELMELKTKA

>gi568815595r:16488663_16698599|GENSCAN_predicted_CDS_5|414_bp
atgaactgccttcctgagacacagggccagaaatacaagctgttcagctcctcgaggccc
atggactatcgtggaagaggtgcacatgtgagattaccaaaagtagatgaaaccacaaag
atagggaaaaaacagagcagaaaaactggaaactctaaaaagcagagcgcctctcctcct
ccaaaggaatgcagttcctcactggcaacggaacaaaactggacagagaatgactttgat
gagttgagagaagaaggcttcagacaatcaaactactctgagatacaggaggaaattcaa
accaaaggcaaagaagttaaaaactttgaaaaaaatttagacgaatgtatcactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggcttga

>gi568815595r:16488663_16698599|GENSCAN_predicted_peptide_6|764_aa
MDKFLDTYTLPRLNQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEEL
VPFLLKLFQSIEKEGIPPNSFYEASIILIPKLGRDTTKKENFRPISLMNIDAKILNKILA
NRIQQHIKKLFRHDQVGFIPGMQGWLNIRKSINVIQHINRTKVKNHMIISIDAEKAFDKI
QQPFMLKTLNKFGIDGMYLKIIRAIYDKTTANIILNGQKLEAFPLKTGTRQGCPLSPLLF
NIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIIYLENPIFSAQNLLKLISNFSKL
SGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKGIKYVGIQLTRDVKDLFKENYKPL
LKEIKEDTNKWKNIPCSWVGRINIVKMAILSKVIYRFNAIPIKLPMTFFTELEKTTLNFI
WNQKRACITKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIT
LHIYKYLIIDKPDKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTSYTKINSRWIKDLN
VRPKTIKTLEENLGITIQDIGMGKDFMSKTPKAMATKAKIDKWDLFKLKSFCTTKETTIR
VNRQPTKWEKIFATYSSDKGLISRIYNELKQIYKKKTNNPIKKWVKDMNRHFSKEDIYAA
KRHMKNCSSSLAIKEMQIKTTMRYHLTPVRMAIIKKSGNNRCWRGCGEIGTLLHCWWDCK
LVQPLWKSVWRFLRDLELEIPFDPVIPLLDIYPKDYKSCCYKDT

>gi568815595r:16488663_16698599|GENSCAN_predicted_CDS_6|2295_bp
atggataaatttctggacacatacactctcccaagactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggatctgaaattgtggcaataatcaatagcttaccaaccaaa
aagagtccaggaccagatggattcacagccgaattctaccagaggtataaggaggaactg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcccccctaactca
ttttatgaggccagcatcatcctgataccaaagctgggcagagacacaaccaaaaaagaa
aattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggca
aaccgaatccagcagcacatcaaaaagcttttccgccatgatcaagtgggcttcatccct
gggatgcaaggctggctcaatatacgcaaatcaataaatgtaatccagcatataaacaga
accaaagtcaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaatt
caacaacccttcatgctaaaaactctcaataaattcggtattgatgggatgtatctcaaa
ataataagagctatctatgacaaaaccacagccaatatcatactgaatgggcaaaaactg
gaagcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattc
aacatagtgttggaagttctggccagggcaattaggcaggagaaggaaataaagggtatt
caattaggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattatatatcta
gaaaaccccattttctcagcccaaaatctccttaagctgataagcaacttcagcaaactc
tcaggatacaaaatcaatgtgcaaaaatcacaagcattcttatacaccaataacagacaa
acagagagccaaatcatgagtgaactcccattcacaattgcttcaaagggaataaaatac
gtaggaatccaacttacaagggacgtgaaggacctcttcaaggagaactacaaaccactg
ctcaaggaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtagga
agaatcaatatcgtgaaaatggccatactgtccaaggtaatttatagattcaatgccatc
cccatcaagctaccaatgactttcttcacagaattggaaaaaactactttaaacttcata
tggaaccaaaaaagagcctgcatcaccaagtcaatcctaagccaaaagaacaaagctgga
ggcatcacgctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatgg
tactggtaccaaaacagagatatagatcaatggaacagaacagagccctcagaaataaca
ctgcatatctacaaatatctgatcattgacaaacctgacaaaaacaagcaatggggaaag
gattccctatttaataaatggtgctgggaaaactggctagccatatgtagaaagctgaaa
ctggatcccttccttacatcttatacaaaaattaattcaagatggattaaagacttaaac
gttagacctaaaaccataaaaaccctagaagaaaacctaggcattaccattcaggacata
ggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaatt
gacaaatgggatctatttaaactaaagagcttctgcacaacaaaagaaactaccatcaga
gtgaacaggcaacctacaaaatgggagaaaatttttgcaacctactcatctgacaaaggg
ctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaacaacccc
atcaaaaagtgggtgaaggatatgaacagacacttctcaaaagaagacatttatgcagcc
aaaagacacatgaaaaactgctcatcatcactggccatcaaagaaatgcaaatcaaaacc
acaatgagataccatctcacaccagttagaatggcgatcattaaaaagtcaggaaacaac
aggtgctggagaggatgtggagaaataggaacacttttacactgttggtgggactgtaaa
ctagtccaaccattgtggaagtcagtgtggcgattcctcagggatctagaactagaaata
ccatttgacccagtcatcccattactggatatatacccaaaggattataaatcatgctgc
tataaagacacatga

>gi568815595r:16488663_16698599|GENSCAN_predicted_peptide_7|67_aa
MTTAMTRALVVNGKVVLEESEALVCRNMKMELEQANERECKVLKKIWGLAKLMDSMLKCL
QRKIDEL

>gi568815595r:16488663_16698599|GENSCAN_predicted_CDS_7|204_bp
atgactacagccatgaccagggccctagttgttaatgggaaagttgtgcttgaggaatcc
gaagcccttgtgtgccgcaacatgaagatggagttggagcaggccaatgagagggagtgc
aaagtgctgaagaaaatctggggcttggccaaactgatggactccatgttaaagtgcttg
cagaggaaaattgatgagttgtga