GENSCAN 1.0	Date run:  6-Nov-116	Time: 22:43:55

Sequence gi568815586r:10059883_10272077 : 212195 bp : 39.76% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4917   4971   55  2  1   75   95    77 0.461   6.86
 1.02 Term +   8227   8447  221  2  2  115   37    71 0.340   0.92
 1.03 PlyA +   8653   8658    6                               1.05

 2.07 PlyA -   9652   9647    6                               1.05
 2.06 Term -  11631  11451  181  2  1   85   37   140 0.348   4.70
 2.05 Intr -  13477  13411   67  2  1   86   67    53 0.717   0.04
 2.04 Intr -  21531  21355  177  1  0    2  107   136 0.193   5.87
 2.03 Intr -  29340  29242   99  1  0  117   75    72 0.466   7.96
 2.02 Intr -  39106  38926  181  1  1   41   80   213 0.509  14.32
 2.01 Init -  39459  39391   69  0  0   44   87    26 0.424  -0.80
 2.00 Prom -  40054  40015   40                              -9.75

 3.00 Prom +  45431  45470   40                              -6.15
 3.01 Sngl +  46882  47292  411  0  0   32   42   226 0.161   8.44
 3.02 PlyA +  47393  47398    6                               1.05

 4.00 Prom +  48639  48678   40                              -3.65
 4.01 Init +  48816  48895   80  2  2   83   47    53 0.790   1.28
 4.02 Term +  51809  52424  616  2  1   70   41   822 0.758  68.65
 4.03 PlyA +  53097  53102    6                               1.05

 5.07 PlyA -  55832  55827    6                               1.05
 5.06 Term -  56147  55998  150  2  0   72   48    81 0.055  -0.57
 5.05 Intr -  65566  65415  152  2  2   83  111     5 0.479   1.26
 5.04 Intr -  67963  67865   99  2  0   93   92    67 0.538   6.76
 5.03 Intr -  68617  68441  177  2  0    8   28   157 0.469   0.67
 5.02 Intr -  70269  70098  172  0  1  125   71   122 0.998  12.79
 5.01 Init -  79097  79020   78  2  0   24   91    75 0.351   2.51
 5.00 Prom -  81797  81758   40                              -6.45

 6.00 Prom +  87491  87530   40                              -2.55
 6.01 Sngl +  93520  94026  507  0  0   53   48   265 0.883  14.79
 6.02 PlyA +  94691  94696    6                               1.05

 7.07 PlyA -  96373  96368    6                               1.05
 7.06 Term - 100139  99998  142  1  1   84   38   117 0.833   2.72
 7.05 Intr - 100580 100465  116  2  2   64   89    17 0.456  -2.27
 7.04 Intr - 101043 100904  140  1  2   86  105    34 0.791   4.16
 7.03 Intr - 107075 106812  264  0  0  -31   82   277 0.500  11.76
 7.02 Intr - 109293 109192  102  1  0  110  101   -21 0.587   0.63
 7.01 Init - 112195 112120   76  1  1   54   74   106 0.881   7.10
 7.00 Prom - 115051 115012   40                              -7.45

 8.00 Prom + 119043 119082   40                              -5.45
 8.01 Init + 119693 119746   54  1  0   51  105   146 0.994  11.95
 8.02 Intr + 122668 122711   44  0  2   74   98    28 0.972  -1.48
 8.03 Intr + 126538 126707  170  1  2   83   84   171 0.999  14.87
 8.04 Term + 130014 130258  245  1  2  112   45   255 0.983  18.68
 8.05 PlyA + 131887 131892    6                               1.05

 9.00 Prom + 135241 135280   40                              -4.55
 9.01 Init + 153248 153337   90  1  0   81   86   197 0.958  19.34
 9.02 Intr + 158181 158259   79  2  1  120   55    82 0.984   6.31
 9.03 Intr + 160558 160817  260  2  2   66   56   187 0.718   9.56
 9.04 Term + 161905 161970   66  0  0  121   48    81 0.734   4.36
 9.05 PlyA + 163221 163226    6                               1.05

10.00 Prom + 164576 164615   40                              -8.35
10.01 Init + 164677 164779  103  0  1   60   68   109 0.421   4.57
10.02 Term + 165646 166349  704  2  2   47   49   302 0.396  14.90
10.03 PlyA + 168128 168133    6                               1.05

11.00 Prom + 170796 170835   40                              -2.35
11.01 Init + 174346 174527  182  0  2   75  -16   193 0.147   4.38
11.02 Intr + 177488 177668  181  2  1   92   56   103 0.172   6.45
11.03 Intr + 192060 192278  219  2  0  100   80    98 0.803   7.78
11.04 Term + 199001 199105  105  1  0   51   39   104 0.674  -0.77
11.05 PlyA + 200152 200157    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:10059883_10272077|GENSCAN_predicted_peptide_1|91_aa
MDTADAGFGKMAPLLLLAWLMTCFLLINPESWFNILRKRKSLLCTGDLSSTRKGWAPRLT
VPAISSELHKQEPRKKKVSSSRKTSSYSAPL

>gi568815586r:10059883_10272077|GENSCAN_predicted_CDS_1|276_bp
atggacacagcggacgctggctttggcaagatggctcctctccttctcctggcctggctc
atgacctgtttcctgttgataaatcctgaaagctggttcaatatcctcaggaaaagaaag
agcttattgtgtaccggagatctcagctctaccaggaaaggctgggctcctcgtttgact
gttcctgcaatttcttcagaattacataaacaagaacctagaaagaaaaaagtctcctca
tccagaaaaaccagttcatacagtgcccctctctga

>gi568815586r:10059883_10272077|GENSCAN_predicted_peptide_2|257_aa
MCVLPSYYYSADSEGTTVLHRAILTVARRPRAIRPHFTLTAVGIQMQAKYSSTRDMLDDD
GDTTMSLHSQGSATTRHPEPRRTEHRAPSSTWRPVALTLLTLCLVLLIGLAALGLLFFQY
YQLSNTGQDTISQMEERLGNTSQELQSLQVQNIKLAGSLQHVAEKLCRELYNKAGGLLRP
DSGKAWLWMDGTPFTSELFHIIIDVTSPRSRDCVAILNGMIFSKDCKELKRCVCERRAGM
VKPESLHVPPETLGEGD

>gi568815586r:10059883_10272077|GENSCAN_predicted_CDS_2|774_bp
atgtgtgtccttccaagttattattattctgcagactctgaaggaaccacagtgctacac
cgtgctattctcacagtagcccggcggcccagggcaatccgaccacatttcactctcacc
gctgtaggaatccagatgcaggccaagtacagcagcacgagggacatgctggatgatgat
ggggacaccaccatgagcctgcattctcaaggctctgccacaactcggcatccagagccc
cggcgcacagagcacagggctccctcttcaacgtggcgaccagtggccctgaccctgctg
actttgtgcttggtgctgctgatagggctggcagccctggggcttttgttttttcagtac
taccagctctccaatactggtcaagacaccatttctcaaatggaagaaagattaggaaat
acgtcccaagagttgcaatctcttcaagtccagaatataaagcttgcaggaagtctgcag
catgtggctgaaaaactctgtcgtgagctgtataacaaagctggagggcttttgcgccct
gacagtggcaaggcctggctgtggatggatggaacccctttcacttctgaactgttccat
attataatagatgtcaccagcccaagaagcagagactgtgtggccatccttaatgggatg
atcttctcaaaggactgcaaagaattgaagcgttgtgtctgtgagagaagggcaggaatg
gtgaagccagagagcctccatgtcccccctgaaacattaggcgaaggtgactga

>gi568815586r:10059883_10272077|GENSCAN_predicted_peptide_3|136_aa
MMISIDAEKAFNKIQQPFMLKTLNKLDIDGTYLKIIRAFYDKPTANIILNGQQQEAFPLK
TGTRQGCLLSPLLFNIVLEVLARTIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVS
AENLLKLISNFRKVSG

>gi568815586r:10059883_10272077|GENSCAN_predicted_CDS_3|411_bp
atgatgatctcaatagatgcagaaaaggccttcaacaaaattcaacagcccttcatgcta
aaaactctcaataaactagatattgatgggacgtatctcaaaataataagagctttttat
gacaaacccacagccaacatcatactgaatgggcaacaacaggaagcattccctttgaaa
actggcacaagacaaggatgccttctctcaccactcctattcaacatagtgttggaagtt
ctggccaggacaatcaggcaggagaaagaaataaagggtattcaattaggaaaagaggaa
gtcaaattgtccctctttgcagatgacatgattgtatatttagaaaaccccatcgtctca
gccgaaaatctcctcaagctgataagcaacttcagaaaagtctcaggataa

>gi568815586r:10059883_10272077|GENSCAN_predicted_peptide_4|231_aa
MDEAGNHHSEQTITRTENQTPHVLTRRRLAPTRTQAAPRASRRSDRSALERESKSKIAED
EQINASKNEEDAAKMLVGGLSWDTSKKDLKDYFPKFGEVIDCTIKMDPNIGRARGFGFIL
FKDATNVEKVLDQKEYRLDVRVIDPKKAMAMKKDPVKKIFAEGLNPEATEEKIREYFGEF
GEIEAIEIPVDPKLNKRQGFVFITFKKEPVKKVLEKKFHTISGSKREITVA

>gi568815586r:10059883_10272077|GENSCAN_predicted_CDS_4|696_bp
atggatgaagctggaaaccatcattctgagcaaactatcacaaggacagaaaaccaaaca
ccacatgttctcactcgtagacgcctggcgccaacgagaacccaggccgccccgagggcg
agtcgtcggagcgaccgcagcgccctcgagcgggaatcaaaatcaaaaatcgccgaggac
gaacagatcaacgccagcaagaacgaggaggacgcagcaaaaatgctcgttggtggcctg
agctgggataccagcaaaaaagatttaaaagactatttccctaaatttggagaggtcatt
gactgtacaataaaaatggatcccaacattggacgggcaagagggtttgggtttatcctg
ttcaaagatgcaaccaatgtggagaaggtcctagaccagaaggagtacaggctggatgtc
cgtgtcattgaccctaaaaaggccatggctatgaagaaggacccggtgaagaaaatcttc
gccgagggtctgaatcctgaagccactgaggaaaagatcagggagtactttggcgagttt
ggggagatcgaggccattgaaattccagtggatccaaagttgaacaaaagacaaggtttt
gtgtttatcacctttaaaaaagaacctgtgaagaaagttctggagaaaaagttccatact
atcagtggaagtaagcgtgagatcacggtggcctag

>gi568815586r:10059883_10272077|GENSCAN_predicted_peptide_5|275_aa
MSNKVTKVNAMEHRAAMGKIKRDDPQTVISGAERKELPNAISIQGLSRTMEYHPDLENLD
EDGYTQLHFDSQSNTRIAVVSEKAISSKNQWDFRDPTNVKTCRCQCGTEIRSIQLSSQCA
EITIPAIEEEGILTGGEAQQILGSCAASPPWRLIAVILGILCLVILVIAVVLGTMGVLSS
PCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELLIWKYTLINRKHPP
FSKRQKTSTLFQETENIHTFPRDRKGEIAASRTSV

>gi568815586r:10059883_10272077|GENSCAN_predicted_CDS_5|828_bp
atgtccaataaagtaacaaaagtgaatgcaatggaacacagagccgctatgggtaaaata
aagagggatgacccacagacagtcatctcaggagcagaaagaaaagagctcccaaatgct
atatctattcaggggctctcaagaacaatggaatatcatcctgatttagaaaatttggat
gaagatggatatactcaattacacttcgactctcaaagcaataccaggatagctgttgtt
tcagagaaagctatttcctctaagaatcagtgggatttcagggatcctactaatgtcaag
acctgtagatgtcaatgtggaactgaaattaggagcatacagttatcaagccaatgtgcc
gaaattacaattccagcaattgaagaagaaggtatccttactggtggagaagcacagcaa
atcctaggatcgtgtgctgcatctcctccttggcgcctcattgctgtaattttgggaatc
ctatgcttggtaatactggtgatagctgtggtcctgggtaccatgggggttctttccagc
ccttgtcctcctaattggattatatatgagaagagctgttatctattcagcatgtcacta
aattcctgggatggaagtaaaagacaatgctggcaactgggctctaatctcctaaagata
gacagctcaaatgaattgcttatatggaaatatacgttaataaacagaaaacatccaccc
ttttccaagagacagaaaacatccacacttttccaagagacagaaaacatccacactttt
ccaagagacagaaaaggtgaaatagctgctagccgaacctcagtctga

>gi568815586r:10059883_10272077|GENSCAN_predicted_peptide_6|168_aa
MAHKSNGQRCGFLRFSELATTSCGVAQRGELTPPAPLSSLRRVLSSHYRHSRISFARLSG
LGSSLRRTPMAGRPSAPAPNLGISLPRFSETRDSLPAGAQAMNLGPALRRCTPQPRALAP
ASTSAILHPRFRHGLRRGLGTAPKRLGKNSVRHVGLQSTQDGQWSLHR

>gi568815586r:10059883_10272077|GENSCAN_predicted_CDS_6|507_bp
atggcgcataagagtaacggccagcgctgcgggtttttacgtttcagcgagctcgcaaca
acgtcctgtggtgtggcccagcgcggggagctgaccccaccagctccgctctcaagcctt
cggagagtcctctccagtcactatcgtcattcccgcatttcctttgctaggctgtccggg
ctgggcagctccctcaggcggacacccatggctggcagaccttccgcgcctgcccctaat
ctgggcatatcactccctcggttttctgagactcgggactccttgcccgctggagcgcag
gccatgaatctgggtcccgcactgcggcgctgcacgccgcagcccagggctttggcccca
gccagcacatccgccatcctgcaccccaggttccggcacgggctgcgacggggcctcgga
actgctcccaagcggctgggaaagaactcagtcaggcatgtcggcctgcaaagcacccag
gatgggcagtggagtctgcaccgttga

>gi568815586r:10059883_10272077|GENSCAN_predicted_peptide_7|279_aa
MTFDDLKIQTVKDQPDEKSNGKKAKGLQFLYSPWWCLAAATLGVLCLGLVVTIMVLGMQL
SQVSDLLTQEQANLTHQKKKLEGQISARQQAEEASQESENELKEMIETLARKLNEKSKEQ
MELHHQNLNLQETLKRVANCSGIGRRVAPCPQDWIWHGENCYLFSSGSFNWEKSQEKCLS
LDAKLLKINSTADLDFIQQAISYSSFPFWMGLSRRNPSYPWLWEDGSPLMPHLFRVRGAV
SQTYPSGTCAYIQRGAVYAENCILAAFSICQKKANLRAQ

>gi568815586r:10059883_10272077|GENSCAN_predicted_CDS_7|840_bp
atgacttttgatgacctaaagatccagactgtgaaggaccagcctgatgagaagtcaaat
ggaaaaaaagctaaaggtcttcagtttctttactctccatggtggtgcctggctgctgcg
actctaggggtcctttgcctgggattagtagtgaccattatggtgctgggcatgcaatta
tcccaggtgtctgacctcctaacacaagagcaagcaaacctaactcaccagaaaaagaaa
ctggagggacagatctcagcccggcaacaagcagaagaagcttcacaggagtcagaaaac
gaactcaaggaaatgatagaaacccttgctcggaagctgaatgagaaatccaaagagcaa
atggaacttcaccaccagaatctgaatctccaagaaacactgaagagagtagcaaattgt
tcaggtattgggagaagggtggctccttgtccgcaagactggatctggcatggagaaaac
tgttacctattttcctcgggctcatttaactgggaaaagagccaagagaagtgcttgtct
ttggatgccaagttgctgaaaattaatagcacagctgatctggacttcatccagcaagca
atttcctattccagttttccattctggatggggctgtctcggaggaaccccagctaccca
tggctctgggaggacggttctcctttgatgccccacttatttagagtccgaggcgctgtc
tcccagacatacccttcaggtacctgtgcatatatacaacgaggagctgtttatgcggaa
aactgcattttagctgccttcagtatatgtcagaagaaggcaaacctaagagcacagtga

>gi568815586r:10059883_10272077|GENSCAN_predicted_peptide_8|170_aa
MGVRVHVVAASALLYFILLSGTRCEENCGNPEQLLVVIGALLLLCGLTSLCFRCCCLSRQ
QNGEDGGPPPCEVTVIAFDHDSTLQSTITSLQSVFGPAARRILAVAHSHSSLGQLPSSLD
TLPGYEEALHMSRFTVAMCGQKAPDLPPVPEEKQLPPTEKESTRIVDSWN

>gi568815586r:10059883_10272077|GENSCAN_predicted_CDS_8|513_bp
atgggagtccgagttcatgtcgtggcggcctcagccctgctgtatttcatcctgctttct
gggacgagatgtgaggaaaactgtggtaatcctgaacagttgctagtggtaattggcgcg
ctgcttctcctgtgtggcctgacgtccctgtgcttccgctgctgctgtctgagccgccag
caaaatggggaagatgggggcccaccaccctgtgaagtgaccgtcattgctttcgatcac
gacagcactctccagagcactatcacatctctgcagtcggtgtttggccctgcagctcgg
aggatcctggctgtggctcactcccacagctccctgggccagctgccctcctctttggac
accctcccagggtatgaagaagctcttcacatgagtcgcttcacagtagccatgtgcggg
cagaaagcacctgatctacccccagtacctgaagaaaagcagctgcctccaacagagaag
gagtcgactcgaatagttgactcttggaactga

>gi568815586r:10059883_10272077|GENSCAN_predicted_peptide_9|164_aa
MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQF
YFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEVMVLVAQYWMPSSAVWHPLALVLD
ALITHLRSGAEGVIYPDPLTYGSDNHEEDYFLYVAYSDESVYGK

>gi568815586r:10059883_10272077|GENSCAN_predicted_CDS_9|495_bp
atgaagttccagtacaaggaggaccatccctttgagtatcggaaaaaggaaggagaaaag
atccggaagaaatatccggacagggtccccgtgattgtagagaaggctccaaaagccagg
gtgcctgatctggacaagaggaagtacctagtgccctctgaccttactgttggccagttc
tacttcttaatccggaagagaatccacctgagacctgaggacgccttattcttctttgtc
aacaacaccatccctcccaccagtgctaccatgggccaactgtatgaggtaatggttctg
gttgcacaatactggatgccgtccagtgcagtctggcatcctctagcccttgttctagat
gcgttgataacacatctgagaagtggggcagaaggtgttatttatccggatcctcttaca
tatggcagtgacaatcatgaggaagactattttctgtatgtggcctacagtgatgagagt
gtctatgggaaatga

>gi568815586r:10059883_10272077|GENSCAN_predicted_peptide_10|268_aa
MKPRTLAVSVTALKVACLESVPSDVQMCSEFLPSDSGAQLASPSGSHTGAAGGAACQSRA
VRSHSSALGLFVPSRSMGLGAVEQGVVLVGEARAAQVPMEWVGGSGMAGCRSRALPRGKA
AKARREIERSAGGPALLGDPVHPPQPLARVLSPPLPRASRAGWLAAPSAGPAKSTPTRNS
SWRASAPRSPGSARASPSTPPSKLREWAPALASPERGSHSAVGGLKGSSNATKVGAQAGE
VPRASEGSEDCQHAVTSQQAGLDLALLY

>gi568815586r:10059883_10272077|GENSCAN_predicted_CDS_10|807_bp
atgaagccgcggaccctcgcggtgagtgttacagctcttaaggtggcgtgtctggagtct
gtcccttctgatgttcagatgtgttcggagtttcttccttctgactcgggagcccagctg
gcttcacccagtggatcccacaccggggctgcaggtggagctgcctgccagtcccgcgcc
gtgcgctcgcattcctcagcccttgggttgtttgttccttcccggtcgatgggactgggc
gccgtggagcagggggtggtgctcgtcggggaggctcgggccgcacaggtgcccatggag
tgggtgggaggctcaggcatggcgggctgcaggtcccgagccctgccccgcgggaaggca
gctaaggcccggcgagaaatcgagcgcagcgccggtgggccagcactgctgggggaccca
gtacaccctccgcagccactggcccgggtgctaagtcccccattgccccgggccagcagg
gctggctggctggctgctccgagtgcggggcccgccaagtccacgcccacccggaactcc
agctggcgcgcaagcgccccacgcagccccggttccgctcgtgcctctccctccacacct
ccctccaagctgagggagtgggctccagccttggccagcccagaaaggggctcccacagt
gcagtgggggggctgaagggctcctcaaatgccaccaaagtgggagcccaggcaggggag
gtgccgagagcaagcgagggctctgaggactgccagcatgctgtcacttctcagcaggct
ggattggatttggcacttctttactga

>gi568815586r:10059883_10272077|GENSCAN_predicted_peptide_11|228_aa
MALGISAPVALQGTAPLLAVLSGCSFPKHMLQTVNGSPFWGLENGGPLLRARLGSAPVET
LELFSSLNKILHSYHSSVVKCDLILLGRWTKAWDPLSAGGGCHTGPLPLQVEGNHPTGSY
RVPNRPQYRSVAWGLGTSGLVNYTFLLNSGETTYQFLRGNKDFLKNHIKLNYCFLLIEVD
NLTLVFVIEKTLGQIYTPNLGKRESVRPTKKPKKLRSFVAKGAMSRDK

>gi568815586r:10059883_10272077|GENSCAN_predicted_CDS_11|687_bp
atggccttgggaatctctgcccctgtggctttgcagggtacagccccactcctggctgtg
cttagtggctgcagctttcccaagcacatgttgcaaactgtcaatggatcaccattctgg
ggtttggagaatggtggccctcttctcagagctcgactaggcagtgctccagtggagact
ctagaactgttttcatcgctcaataaaattctccactcttaccattcttcagttgtcaag
tgtgacctcattcttcttggacgctggacaaaagcttgggacccactaagtgcaggtgga
ggctgtcacactggccctttgcccttgcaagtggagggcaaccaccccactggcagctac
agggttcctaacaggccacagtaccggtctgtggcctggggcttggggacctctggtctg
gtcaattacacatttctcctgaattctggagagacaacataccagttcctcagaggaaac
aaagattttcttaaaaatcacatcaaattaaattactgctttttgcttattgaagtggat
aatcttactcttgtttttgtcattgaaaagacactaggccagatatatacaccaaacctt
gggaaaagggaatctgtaagacctacgaagaagccaaagaaacttagatcatttgtagca
aaaggagcaatgagcagagataaatag