GENSCAN 1.0	Date run:  5-Nov-116	Time: 21:11:32

Sequence gi568815596f:186386383_186608730 : 222348 bp : 37.80% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   4361   4573  213  1  0   39   43   195 0.664   5.03
 1.02 PlyA +   4818   4823    6                               1.05

 2.00 Prom +   5437   5476   40                              -1.55
 2.01 Init +   6266   6308   43  1  1   68   92    38 0.178   2.83
 2.02 Term +  19027  19136  110  2  2  106   45    92 0.234   4.39
 2.03 PlyA +  20226  20231    6                               1.05

 3.00 Prom +  20702  20741   40                              -7.45
 3.01 Init +  24640  24703   64  0  1   82   95    39 0.202   5.36
 3.02 Intr +  25794  26081  288  1  0   44   81   129 0.210   4.09
 3.03 Intr +  31794  31983  190  1  1  -27   61   146 0.004  -1.88
 3.04 Intr +  45323  45553  231  2  0   61   47   226 0.803  11.77
 3.05 Intr +  45572  45864  293  2  2  -28   42   204 0.405   0.05
 3.06 Intr +  46450  46754  305  2  2   63  -25   231 0.299   4.68
 3.07 Intr +  47289  47505  217  2  1   20    3   208 0.185   2.65
 3.08 Intr +  47778  47897  120  1  0   91   94    81 0.655   8.55
 3.09 Intr +  47954  48405  452  0  2   -5   57   374 0.207  17.09
 3.10 Intr +  49766  49953  188  1  2   47    8   127 0.309  -1.83
 3.11 Intr +  50348  50514  167  2  2   64   10   175 0.284   5.98
 3.12 Intr +  51650  51783  134  0  2   52   47   103 0.113   2.04
 3.13 Term +  71637  71882  246  2  0  -27   35   255 0.670   3.51
 3.14 PlyA +  72002  72007    6                               1.05

 4.00 Prom +  80383  80422   40                              -6.35
 4.01 Init +  89130  89807  678  2  0   42   86   238 0.359  14.18
 4.02 Intr +  99764  99894  131  1  2   84   50   193 0.949  13.67
 4.03 Intr +  99939 100075  137  0  2  100   81   163 0.985  16.09
 4.04 Intr + 100219 100409  191  2  2   77  -17   108 0.028  -2.42
 4.05 Intr + 108851 108952  102  1  0   88  111   126 0.999  14.35
 4.06 Intr + 113800 113911  112  0  1   -1   92   117 0.973   2.23
 4.07 Intr + 114891 115043  153  1  0   42   86   111 0.949   5.42
 4.08 Intr + 116114 116205   92  0  2   65   39    82 0.981  -0.21
 4.09 Intr + 117650 117832  183  1  0   67   78   193 0.987  15.26
 4.10 Intr + 119069 119215  147  1  0   45   68    80 0.469   1.21
 4.11 Intr + 119358 119459  102  2  0   77   94   252 0.999  24.15
 4.12 Intr + 120331 120454  124  0  1   64  115    60 0.989   5.54
 4.13 Term + 122161 122351  191  2  2   45   47   306 0.826  18.83
 4.14 PlyA + 122938 122943    6                               1.05

 5.00 Prom + 125510 125549   40                              -6.45
 5.01 Sngl + 134795 135202  408  1  0   57   41   294 0.602  17.64
 5.02 PlyA + 135900 135905    6                               1.05

 6.00 Prom + 146646 146685   40                              -1.05
 6.01 Sngl + 175715 175948  234  1  0   90   48   158 0.788   6.85
 6.02 PlyA + 176062 176067    6                               1.05

 7.00 Prom + 181210 181249   40                              -4.85
 7.01 Init + 186551 186605   55  1  1   50   81    65 0.203   3.73
 7.02 Intr + 192257 192343   87  0  0   95   47    63 0.296   1.92
 7.03 Term + 200141 200277  137  0  2   87   46    54 0.312  -1.70
 7.04 PlyA + 201357 201362    6                               1.05

 8.00 Prom + 201645 201684   40                              -4.55
 8.01 Init + 203957 204141  185  1  2   83   88   316 0.927  27.74
 8.02 Intr + 211364 211537  174  2  0   66   53   131 0.835   5.53
 8.03 Intr + 215639 215769  131  2  2   68   99   115 0.991  10.02
 8.04 Term + 216924 217030  107  1  2   50   46   107 0.977   0.29
 8.05 PlyA + 217260 217265    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  45063  45121   59  2  2   65   66    45 0.820   0.83


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:186386383_186608730|GENSCAN_predicted_peptide_1|70_aa
MSTFNVNKLVVKEAYLKIIRAIYDIPTANIILNRQKLKAFLLSMTRTRMPTLTTPIRHST
GSPSHGNQAR

>gi568815596f:186386383_186608730|GENSCAN_predicted_CDS_1|213_bp
atgtcaaccttcaatgtcaacaaacttgtcgtcaaagaggcatacctcaaaataataaga
gccatctatgacatacccacagccaacatcatactgaacaggcaaaagctgaaagcgttc
ctcctttcgatgaccagaacaaggatgcccactctcaccactcccattcgacatagtact
ggaagtcctagccacggcaatcaagcaagataa

>gi568815596f:186386383_186608730|GENSCAN_predicted_peptide_2|50_aa
MDTAGGPYPKEINPAEFMQVQVAGKKHTIMLATLKFKMINLKKVLHAAKE

>gi568815596f:186386383_186608730|GENSCAN_predicted_CDS_2|153_bp
atggatacagctggaggcccttatcctaaggaaattaacccagctgaattcatgcaggta
caagtggctgggaagaaacacacaatcatgctggctactcttaaattcaaaatgattaac
ctcaagaaggttcttcatgctgccaaggaatga

>gi568815596f:186386383_186608730|GENSCAN_predicted_peptide_3|964_aa
MTSKGHSTVLSIQLLQDDGEHVNDGMLLCMTHFMARWVRKHPVHDRQFRSHGDLMNHSQT
FSFHQSPVTDQELSLKPLRQDSKDILLALPAEEKLLLLGLMDRNGEKGIGQVNGCLSEKS
EKKKEEQRYQQTRVRHQNNVKMHQFLSNFCKVTDVALSFLEQGKEENPIHASIHHFSDKN
RPQLESDNWHHKRDPEVSEPSVPAASGWVMWPQHGLWYPVAAVLLRWALVETWVLVAGSL
MSMEKALKQLEVQSTKKQVGWAFLTALQEVHTKSLRDAAQVRALQVQAQSLEAWLHSSEK
ELKAAMNGDFQMQTGHLETWLQSLEKELEAAVNAGLGPWSQPEIPTLIRMRKNPHWCCLH
EVTTAMAALREVEGHRWDREVCAVKKGKMFRLRGPPIPWEKRGPQQVTYLQMWIDVILAR
ADQEKINKQPNDVLLTLWTKLSLEHQFQKMPKGKDISYRLPDGHTEITETIKKVEKVQIV
RGTHILYDSAMLPARKPDGTWWMMADYQELNKVTPPLQATVPSVMDLMNYLEGAAPLLQQ
HLAACGWTVNKSKVQGPGLSAKFLEVIWSALYGEAVANFSGPPGILMDICAPFSSNDKKP
LHLLTKKDSTWDSDDAAETTFLAAKWAIQQAQILWVVDQGCLFELDVHVTTDGFGWGLWQ
CTEWLRMQVGFWPQLWKEAELQFTLTEKQLAAVYASLQACESVTGWAAVVMQMTYLIAGW
VSTNDDLLRSGRGTNGNLLLPVPMPLKVGEQKTWLWPWTLQPPPPPPPMPVVGHCISLEK
GLQWICTALPEAAAVDGLPWHTQSGPADNSTQLETWGLMADTWNTMQQALDKGCRKTHEL
AHAQRKGKAMSKLSTIPRVVFQLPPFAPLTPLRHQLEPDTEVAKDYNRRESGLITRALKR
KQVLPDKRDSKHQRTPRQGDYLMLALNIEGATGQRMQVASRSGKQPLDDCQQGNVDLSTT
TTRN

>gi568815596f:186386383_186608730|GENSCAN_predicted_CDS_3|2895_bp
atgacttcaaaaggccattctactgttctatcaatccagctgcttcaggatgatggggaa
catgttaatgatggaatgctgctatgcatgacccattttatggctagatgggtcagaaag
cacccagttcatgataggcaattcaggtcgcatggtgacttgatgaaccatagtcaaacg
ttcagtttccaccaaagcccagtaacagaccaagagctgtctctcaaacctctgagacag
gacagtaaagatatattgctggccttgccagctgaagagaaattgcttctgctgggcctt
atggacaggaatggagaaaaaggcattggccaagtcaatggctgcctatcagaaaaaagt
gaaaagaagaaagaagaacaacgctaccaacagaccagagtcagacatcagaataatgta
aaaatgcatcaatttctgagcaatttttgcaaggtcacagatgtggctctaagctttctg
gaacaaggcaaagaagaaaatccgattcatgcctcaattcatcatttctcagataaaaac
agacctcagttagaatctgacaattggcatcacaaacgggatcctgaggtgagtgagcct
tcagtccctgctgcctctggctgggtcatgtggccacaacatgggctgtggtacccagtg
gcagctgtgctgctcagatgggctctggtagaaacctgggtgttggtagctgggtccctc
atgagcatggagaaggcactgaagcagctggaagtgcagagcaccaagaagcaagttgga
tgggcatttttgactgcactacaagaagtacacaccaagtccctgagggatgcagcacag
gtaagggccctccaggtgcaggcacagagcctggaggcctggctacacagctcagaaaaa
gagttaaaagctgccatgaatggggatttccagatgcagacagggcacctggagacctgg
ctacagagcttggaaaaggaattagaggctgctgtgaatgcaggcctgggtccctggtct
cagccagagattcccactctgatacggatgaggaagaacccccattggtgctgcctacat
gaagtgaccactgctatggcagctctccgggaagtagaaggccatcggtgggaccgagag
gtctgtgcagtaaagaaggggaagatgttccgcttgcggggcccccccatcccatgggag
aaaaggggaccccaacaagtgacatacttacagatgtggatagatgtgattctggccaga
gctgaccaagagaaaatcaataagcagcccaatgatgtactcttaactttgtggacaaag
ttgtccctggagcaccaattccagaaaatgcccaaggggaaggacatttcttatcgtttg
ccagatgggcatacagagataactgagacaattaaaaaggtggagaaggtgcagatagtg
cgaggaacccacatcctatatgattctgcaatgttgccagctagaaagcctgatggaact
tggtggatgatggcagactatcaggaactgaataaagtaacaccccctttgcaagcaact
gtaccatcagtcatggatttgatgaactatttagaaggagcagcgcccctcttgcagcaa
catttggcagcatgtggttggactgtcaataaatccaaggtccaaggacctggattatct
gccaaatttttggaagttatctggtcggccctctatggtgaagcagttgcaaacttttct
gggcctcctgggatactgatggacatttgtgccccatttagctcaaatgataaaaaacca
ttgcatctgttaacaaagaaggactctacctgggattcagatgatgcagctgagaccacc
ttcctggcagccaagtgggctattcagcaggcacaaatcctatgggtagttgaccagggg
tgcctgtttgagctggatgtgcatgtgaccacagatggttttggttggggcctatggcag
tgcacagagtggctgagaatgcaagtaggcttttggccccaactatggaaggaagctgag
ctgcagtttaccttgacagagaaacagctagcagctgtatatgcctcccttcaggcttgt
gagagtgtgacaggatgggctgcagttgtcatgcagatgacttacctgatagcgggatgg
gtaagtaccaatgatgacctcctccgatcaggtagggggacaaatggtaacctgttgttg
cctgtcccaatgcccctgaaggtaggagaacagaaaacctggctgtggccatggaccctg
caaccaccacccccgcctccaccaatgccggtggttggccattgtatctccctggagaag
ggcttacaatggatctgcactgcccttccagaagcagctgctgtggatggcttaccttgg
cacacacaatcagggcctgcagataactcaacacagctggagacttggggtctgatggct
gacacctggaatacaatgcagcaagctttggacaaaggatgccgcaaaacccatgagctt
gctcatgcccagagaaagggtaaagccatgtcaaaactgtctactattcctcgagtggtt
ttccagctacctccatttgccccgctgactcccctcagacatcagttagaacctgacaca
gaggttgcaaaagattacaatcgcagagagtctggcctaatcacacgagccctaaaaagg
aaacaggttcttcctgataaaagagattcaaagcatcagaggactccacgtcagggagat
tatctgatgctggctttgaatatagagggggccacagggcaaagaatgcaggtggcctct
aggagtggaaagcagcccctagatgactgtcagcaaggaaatgtggacctcagtactaca
accacaagaaattaa

>gi568815596f:186386383_186608730|GENSCAN_predicted_peptide_4|780_aa
MIISIDAEKAFDKIQQHFMLKTLNKLGTDGTYLKIIRAIYDKPTANIILNGQKLEAFPLK
TGTRQGYPFSPLLFNIVLKVLARAIRQEKEIKGIQLGKKEVKLSLFADDMIVYLENPIVS
AQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSEFPFTIASKRIKYLGIQLT
RDVKDLFKENYKPLFNEIKEDTNKWKNIPCSWVGRINIVKMAILPKWDAVGAHAQLRFRE
PLLATHYALRHRPVAKAAFAGPMSDSLSVRARTPDGIQLRVSLAGAICLRNAPQETGSGR
GQQKGGAKKEGEDYRTPDDASSLITIVTLLAPPHLGFASPPTRPCSPTHAPGCEMTPRDW
HRVLSFASPLRIEEIFQGYDKTFGLKNKKGAKQQKFIKAVTHQVKFGQQNPRQVAQSEAE
KKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLT
LERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHFLEA
IENNKYGWFWVCPGGGDICMYRHALPPGFVLKKDKKKEEKEDEISLEDLIERERSALGPN
VTKITLESFLAWKKRKRQEKIDKLEQDMERRKADFKAGKALVISGREVFEFRPELVNDDD
EEADDTRYTQGTGGDEVDDSVSVNDIDLSLYIPRDVDETGITVASLERFSTYTSDKDENK
LSEASGGRAENGERSDLEEDNEREGTENGAIDAVPVDENLFTGEDLDELEEELNTLDLEE

>gi568815596f:186386383_186608730|GENSCAN_predicted_CDS_4|2343_bp
atgattatatcaatagatgcagaaaaggcctttgacaaaattcaacaacacttcatgcta
aaaactctcaataaattaggtactgatgggacgtatctcaaaataataagagctatttat
gacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaa
actggcacaagacagggataccctttctcaccactcctattcaacatagtgctgaaagtt
ctggccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaaaaggaa
gtcaaattgtccctgtttgcagacgacatgattgtatatctagaaaaccccattgtctca
gcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaat
gtacaaaaatcacaagcattcttatacaccaataacagacaaacagagagccaaatcatg
agtgaattcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttaca
agggatgtgaaggacctcttcaaggagaactacaaaccactgttcaatgaaataaaagag
gatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaa
atggccatactgcccaagtgggacgcagtgggcgcgcacgcgcagctccgcttccgggag
ccgctcctcgctacccactatgctctgcgacatcgacctgtcgcaaaggccgcgtttgcg
gggccaatgagcgactcgctttccgtgcgggccagaacccctgacggtattcagctgcgc
gtaagtctggccggtgccatctgtctccgcaatgccccccaagaaacaggctcaggccgg
gggcagcaaaaaggcggagcaaaaaaagaaggagaagattatcgaacccctgatgacgct
agctctctcattactatagtgacgctgctggcgcccccgcacctgggctttgcctctccg
cccacacgcccgtgttcacccacccatgcacccgggtgcgaaatgacccctcgggactgg
cacagggttttatccttcgctagtcctctcagaattgaggagattttccaaggttatgac
aaaactttcggtttgaagaataagaaaggagcaaagcaacagaagtttatcaaggctgtc
acacatcaagttaaatttggtcaacaaaatccacgtcaggtagcacagagtgaagctgaa
aagaaattgaagaaggatgacaagaagaaagaattgcaggagctaaatgagctgttcaaa
cctgtagttgctgctcaaaaaataagtaaaggtgcagatcccaagtctgtagtatgtgca
ttcttcaagcaaggacagtgtactaaaggagataagtgtaagttctcccatgacttgact
ctggagagaaaatgtgaaaagcgaagtgtttacattgatgcaagagatgaagaacttgaa
aaagatactatggataattgggatgagaaaaagctggaagaagtagtgaacaagaagcac
ggtgaggcggaaaagaaaaaaccaaaaactcaaatagtgtgcaagcatttcctggaagct
attgaaaacaacaagtatggctggttttgggtatgccctggagggggtgatatttgcatg
tatcgtcatgcacttcctcctggatttgtgttgaaaaaagataaaaagaaagaagagaaa
gaagatgaaatttcattagaagatctaattgagagagagcgttctgccctaggtccaaat
gttaccaaaatcactctagaatcttttcttgcctggaagaaaaggaaaagacaagaaaag
attgataaacttgaacaagatatggaaagaaggaaagctgacttcaaagcagggaaagca
ctagtgatcagtggtcgtgaagtgtttgaatttcgtcctgaactggtcaatgatgatgat
gaggaagcagatgatacccgctacacccagggaacaggtggtgatgaggttgatgattca
gtgagtgtaaatgacatagatttaagcctgtacatcccaagagatgtagatgaaacaggt
attactgtagccagtcttgaaagattcagcacatatacttcagataaagatgaaaacaaa
ttaagtgaagcttctggaggtagggctgaaaatggtgaaagaagtgacttggaagaggac
aacgagagggagggaacggaaaatggagccattgatgctgttcctgttgatgaaaatctt
ttcactggagaggatttggatgaactagaagaagaattaaatacacttgatttagaagaa
tga

>gi568815596f:186386383_186608730|GENSCAN_predicted_peptide_5|135_aa
MNPSEMQRKAPPRRQRHRSRAPSAHKMNRMVMSEEQMKLPSTKKAEPPTWAQLKKLTQLA
KKKPREHKGDTNSREHAACSFEDCINSVCRCTQQLRRERPSRTSHDDNGGFVEKKGEMWG
KERDIRLLLCLCRKK

>gi568815596f:186386383_186608730|GENSCAN_predicted_CDS_5|408_bp
atgaacccgtcggagatgcaaagaaaagcacctccacggagacagagacaccgcagtcga
gcaccatcggctcacaagatgaacagaatggtgatgtcagaagaacagatgaagttgcca
tccaccaagaaggcggagccgccgacatgggcacaattaaagaagctgacacagttagct
aaaaaaaagcctagagaacacaaaggtgacacaaactccagagaacatgctgcttgcagc
tttgaagactgtatcaacagtgtctgcaggtgtacccagcagctccgaagagagcgacca
tcgagaacgagccatgatgacaacggtggttttgtcgaaaagaagggggaaatgtgggga
aaagaaagagatatcagactgttactgtgtctatgtagaaagaagtaa

>gi568815596f:186386383_186608730|GENSCAN_predicted_peptide_6|77_aa
MTSPNKLNKAPVTNPREPEICDLSQREFKIGVLRKLSEIQDNTEKEFRVLADKFNQEIGI
TLKNEAEILKLKNSVDK

>gi568815596f:186386383_186608730|GENSCAN_predicted_CDS_6|234_bp
atgacctcaccaaacaaactaaacaaggcaccagtgacaaaccccagagagccagaaata
tgtgacctttcacagagagaattcaaaataggtgttttgaggaagctcagtgaaattcaa
gataacacagagaaggaattcagagttctagcagataaatttaaccaagagattggaata
actttaaaaaatgaagcagaaattctgaagctgaaaaattcagttgacaaataa

>gi568815596f:186386383_186608730|GENSCAN_predicted_peptide_7|92_aa
MYGLLKVVSQGMVAAAGAGLTRRYYSIKLTQRSWQLNAIKAVFHPIAYKKTEAQIGWIDF
PRVIQLVVGKARNGTQVLYFTETTGIKIFTKV

>gi568815596f:186386383_186608730|GENSCAN_predicted_CDS_7|279_bp
atgtatggactccttaaggtggtttcccaaggcatggtagcagctgctggagctggattg
actaggcggtattatagtatcaaattaacacagagatcttggcagcttaatgcaataaaa
gctgtatttcaccctattgcatataagaaaactgaggcacagattggttggattgatttc
cccagggtcatacaactagtagttggcaaagccaggaatggaacccaggtgctttatttt
acagaaaccactggaatcaagatttttactaaagtatag

>gi568815596f:186386383_186608730|GENSCAN_predicted_peptide_8|198_aa
MAFPPRRRLRLGPRGLPLLLSGLLLPLCRAFNLDVDSPAEYSGPEGSYFGFAVDFFVPSA
SSSVVALDSHRSKPYCVNPAVKCACKGSRLHASYENLIPGDPSWTVSSRKHPPLCPGKES
RMFLLVGAPKANTTQPGIVEGGQVLKCDWSSTRRCQPIEFDATVLKYIDSGKYVSETGIM
MWTVPFDIVISAKMIVSH

>gi568815596f:186386383_186608730|GENSCAN_predicted_CDS_8|597_bp
atggcttttccgccgcggcgacggctgcgcctcggtccccgcggcctcccgcttcttctc
tcgggactcctgctacctctgtgccgcgccttcaacctagacgtggacagtcctgccgag
tactctggccccgagggaagttacttcggcttcgccgtggatttcttcgtgcccagcgcg
tcttcatcagtggtggcattagattctcataggagcaaaccctattgtgtgaaccctgct
gtgaagtgtgcatgcaagggatctaggttacatgcttcttatgagaacctaatacctggt
gatccgagttggacagtttcatcccgaaagcatccccctctatgtccagggaaggaaagc
cggatgtttcttctcgtgggagctcccaaagcaaacaccacccagcctgggattgtggaa
ggagggcaggtcctcaaatgtgactggtcttctacccgccggtgccagccaattgaattt
gatgcaacagtactaaaatatattgattctgggaaatatgtcagtgaaacaggaatcatg
atgtggactgttccatttgacattgtgatcagtgccaaaatgattgttagtcattaa