GENSCAN 1.0	Date run:  5-Nov-116	Time: 18:08:35

Sequence gi568815588r:90812869_91020349 : 207481 bp : 40.64% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   9969   9995   27  2  0  102   87    12 0.424   2.15
 1.02 Term +  12322  12495  174  0  0    8   48   185 0.668   3.28
 1.03 PlyA +  12548  12553    6                               1.05

 2.03 PlyA -  13076  13071    6                               1.05
 2.02 Term -  18982  18745  238  0  1   37   48   159 0.323   1.46
 2.01 Init -  19791  19532  260  0  2   66   49   157 0.663   6.41
 2.00 Prom -  21620  21581   40                              -5.15

 3.06 PlyA -  22747  22742    6                               1.05
 3.05 Term -  30001  29951   51  1  0   79   36   105 0.490   0.85
 3.04 Intr -  34842  34764   79  2  1   77   79    44 0.048   1.03
 3.03 Intr -  44858  44265  594  1  0  -22  110   787 0.311  60.66
 3.02 Intr -  45283  44885  399  0  0   59   93   318 0.962  22.10
 3.01 Init -  49811  49804    8  2  2   53   98     0 0.302  -2.19
 3.00 Prom -  57261  57222   40                              -5.45

 4.00 Prom +  58736  58775   40                              -9.25
 4.01 Init +  59119  59200   82  0  1   89   84   137 0.946  14.65
 4.02 Intr +  62001  62056   56  1  2   80   98    64 0.939   4.38
 4.03 Intr +  62690  62746   57  1  0   59   96    51 0.650   1.16
 4.04 Intr +  66195  66266   72  2  0   89   84    24 0.588   0.78
 4.05 Intr +  72944  73033   90  1  0  123  103    10 0.869   5.27
 4.06 Intr +  81907  81974   68  0  2   46   69    74 0.376  -1.92
 4.07 Intr +  83445  83524   80  0  2   52   99   100 0.959   5.78
 4.08 Term +  87702  87811  110  1  2   86   48   125 0.951   5.99
 4.09 PlyA +  87877  87882    6                               1.05

 5.10 PlyA -  88782  88777    6                               1.05
 5.09 Term - 100108  99998  111  1  0   36   54   127 0.829   1.68
 5.08 Intr - 102773 102675   99  2  0  102   75    70 0.886   6.49
 5.07 Intr - 103060 102914  147  1  0   30   70   165 0.858   8.41
 5.06 Intr - 103401 103303   99  0  0   49   61    77 0.579   0.49
 5.05 Intr - 104962 104864   99  1  0   22   54   147 0.942   4.09
 5.04 Intr - 106104 105997  108  0  0   45   94   128 0.992   8.66
 5.03 Intr - 106400 106263  138  2  0   60   59   120 0.983   6.04
 5.02 Intr - 107480 107301  180  2  0  130   78   189 0.999  21.24
 5.01 Init - 108159 108133   27  0  0  104   84    14 0.589   2.51
 5.00 Prom - 109448 109409   40                              -2.95

 6.06 PlyA - 109849 109844    6                               1.05
 6.05 Term - 115585 115385  201  1  0   31   43   196 0.451   5.81
 6.04 Intr - 116605 116495  111  1  0   63   42    88 0.393   1.36
 6.03 Intr - 121074 120983   92  1  2   90   44    25 0.018  -2.91
 6.02 Intr - 129013 128954   60  2  0   66   99    53 0.498   1.99
 6.01 Init - 130398 130248  151  0  1   88   32   100 0.438   4.65
 6.00 Prom - 136930 136891   40                              -2.95

 7.07 PlyA - 137211 137206    6                               1.05
 7.06 Term - 141490 141218  273  1  0   61   38   200 0.634   6.79
 7.05 Intr - 142603 142364  240  1  0   59   74   135 0.323   6.02
 7.04 Intr - 148395 148238  158  1  2  132   58    11 0.007   1.31
 7.03 Intr - 166252 166142  111  2  0   49  121    41 0.049   2.93
 7.02 Intr - 171269 171070  200  1  2  110   84    39 0.280   3.77
 7.01 Init - 174375 174218  158  0  2   78   59    77 0.141   3.23
 7.00 Prom - 178493 178454   40                              -1.25

 8.03 PlyA - 178545 178540    6                               1.05
 8.02 Term - 187678 187386  293  2  2   74   41   205 0.113   8.92
 8.01 Init - 192288 191862  427  0  1   54   16   234 0.027   9.31

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 200103 200046   58  1  1  125  101    50 0.873   7.02


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:90812869_91020349|GENSCAN_predicted_peptide_1|66_aa
MEPHLKEAKRILQDLIHNHQGSTSMSLQACTSMSLQAYTSTRLPPNADMAAVTKNLDHNI
QVPSNT

>gi568815588r:90812869_91020349|GENSCAN_predicted_CDS_1|201_bp
atggagccacatctaaaagaggccaagagaattcttcaggatctcatccacaaccaccaa
ggcagtacctctatgagtctgcaggcttgtacctctatgagtctgcaggcttatacctct
acaaggctgccgcctaatgcagacatggcggcagtgaccaaaaacttagatcacaacatc
caagtcccttcaaatacctga

>gi568815588r:90812869_91020349|GENSCAN_predicted_peptide_2|165_aa
MLEEPFSPLLHCGSPSLGWLRLEPAPSACGKVWRERHEREPGLCMELEGQLEFRVGVGLA
GPHSEQPAGPATPSSEGLSTWASSCRGDCKYTNQHSVPSSGFVNTPVDTLYLANLVGTWI
TFVSSSGIVNAPISTLSKRTNQLSVKQTNRLSVKWTNPQVVGGAR

>gi568815588r:90812869_91020349|GENSCAN_predicted_CDS_2|498_bp
atgcttgaggagcccttcagcccactgctgcactgtgggagcccttctctgggctggctg
aggctggagccagctccctcagcttgtgggaaggtgtggagagagaggcacgagcgggaa
ccggggctgtgcatggagcttgagggccagctggagttccgggtgggcgtgggcttggcg
ggcccgcactcggagcagccggctggccctgccaccccaagcagtgaggggcttagcacc
tgggccagcagctgcagaggggattgtaaatacaccaatcagcactctgtgcctagctca
gggtttgtaaatacaccagtcgacactctgtatctagctaatctagtggggacgtggata
acttttgtgtctagctcagggattgtaaacgcaccaatcagcaccctgtcaaaacggacc
aatcaactctctgtaaaacagaccaatcggctctctgtaaaatggaccaatccgcaggtt
gtgggtggagccagataa

>gi568815588r:90812869_91020349|GENSCAN_predicted_peptide_3|376_aa
MQQSARERAAAGGGGGGDAARLPQGSGGGGGGGGGREGRGALRNFCRCRPGALGAAELLL
RTVELPAEPSPSSLDSARPRRPSGAEAPPAGSPREAALPRYPQRPGVRGVRGSETEPGAP
QRSARAPWLGRAERNRRRRVAGAPAPWAAAHGGAMMDVNSSGRPDLYGHLRSFLLPEVGR
GLPDLSPDGGADPVAGSWAPHLLSEVTASPAPTWDAPPDNASGCGEQINYGRVEKVVIGS
ILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAVMPFVSVTDLIGG
KWIFGHFFCNVFIAMDVMCCTASIMTLCVISIDRNSSALFARAVIFSSDWYLAEALLPRQ
NTDISKAASDVKVLAA

>gi568815588r:90812869_91020349|GENSCAN_predicted_CDS_3|1131_bp
atgcaacagagcgcgagggagcgggcagcggccggaggcggcggcggcggggacgcggcg
cggctgccgcaggggagcggcggcggcggcggcggcggcggcgggcgcgaggggcggggc
gcactccgcaacttctgccgctgccgcccgggcgctctcggcgcagccgagctgctgctg
cgaactgtggagctgccagcggagcccagcccgagctccctcgactccgcgcgtcccagg
cgtccgtcgggggccgaagcgcctcccgcagggagtccccgtgaggccgcgctgccgcgt
tacccgcagcggccgggggtccggggagtgcggggctccgagacagagccaggcgccccc
cagcggtcggcgcgggccccatggctgggccgggcggagcggaaccgccggaggcgcgtg
gccggggcgccggctccatgggcagcggcacacggcggcgcgatgatggacgttaacagc
agcggccgcccggacctctacgggcacctccgctctttccttctgccagaagtggggcgc
gggctgcccgacttgagccccgacggtggcgccgacccggtcgcgggctcctgggcgccg
cacctgctgagcgaggtgacagccagcccggcgcccacctgggacgcgcccccggacaat
gcctccggctgtggggaacagatcaactacggcagagtcgagaaagttgtgatcggctcc
atcctgacgctcatcacgctgctgacgatcgcgggcaactgcctggtggtgatctccgtg
tgcttcgtcaagaagctccgccagccctccaactacctgatcgtgtccctggcgctggcc
gacctctcggtggctgtggcggtcatgcccttcgtcagcgtcaccgacctcatcgggggc
aagtggatctttggacactttttctgtaatgtcttcatcgccatggacgtcatgtgctgc
acggcctcgatcatgaccctgtgcgtgatcagcattgacaggaactcatctgccttattt
gcaagagctgtaatatttagctctgattggtatctggctgaagccttgcttcctcgccag
aacaccgacattagcaaagctgccagtgatgtgaaggtcttagcagcttag

>gi568815588r:90812869_91020349|GENSCAN_predicted_peptide_4|204_aa
MAVFADLDLRAGSDLKALRGLVETAAHLGYSVVAINHIVDFKEKKQEIEKPVAVSELFTT
LPIVQRATSSRARLYDVVAVFPKTEKLFHIACTHLDVDLVCITVTEKLPFYFKRPPINVA
IDRGLAFELVYSPAIKDSTMRRGLLFGLSESDAKAAVSTNCRAALLHGETRKTAFGIIST
VKKPRPSEGDEDCLPASKKAKCEG

>gi568815588r:90812869_91020349|GENSCAN_predicted_CDS_4|615_bp
atggcggtgtttgcagatttggacctgcgagcgggttctgacctgaaggctctgcgcgga
cttgtggagacagccgctcaccttggctattcagttgttgctatcaatcatatcgttgac
tttaaggaaaagaaacaggaaattgaaaaaccagtagctgtttctgaactcttcacaact
ttgccaattgtacagagagcaacttcttcaagggcccggctctatgatgttgttgcagtt
tttccaaagacagaaaagctttttcatattgcttgcacacatttagatgtggatttagtc
tgcataactgtaacagagaaactaccattttacttcaaaagacctcctattaatgtggcg
attgaccgaggcctggcttttgaacttgtctatagccctgctatcaaagactccacaatg
agaagaggcttgctgtttgggctctctgaaagtgacgccaaggctgcggtgtccaccaac
tgccgagcagcgcttctccatggagaaactagaaaaactgcttttggaattatctctaca
gtgaagaaacctcggccatcagaaggagatgaagattgtcttccagcttccaagaaagcc
aagtgtgagggctga

>gi568815588r:90812869_91020349|GENSCAN_predicted_peptide_5|335_aa
MMVLKVEELVTGKKNGNGEAGEFLPEDFRDGEYEAAVTLEKQEDLKTLLAHPVTLGEQQW
KSEKQREAELKKKKLEQRSKLENLEDLEIIIQLKKRKKYRKTKVPVVKEPEPEIITEPVD
VPTFLKAALENKLPVVEKFLSDKNNPDVCDEYKRTALHRACLEGHLAIVEKLMEAGAQIE
FRDMLESTAIHWASRGGNLDVLKLLLNKGAKISARDKPLSSFLANQQRFPIFQLLSTALH
VAVRTGHYECAEHLIACEADLNAKDREGDTPLHDAVRLNRYKMIRLLIMYGADLNIKNCA
GKTPMDLVLHWQNGTKAIFDSLRENSYKTSRIATF

>gi568815588r:90812869_91020349|GENSCAN_predicted_CDS_5|1008_bp
atgatggtactgaaagtagaggaactggtcactggaaagaagaatggcaatggggaggca
ggggaattccttcctgaggatttcagagatggagagtatgaagctgctgttactttagag
aagcaggaggatctgaagacacttctagcccaccctgtgaccctgggggagcaacagtgg
aaaagcgagaaacaacgagaggcagagctcaaaaagaaaaaactagaacaaagatcaaag
cttgaaaatttagaagaccttgaaataatcattcaactgaagaaaaggaaaaaatacagg
aaaactaaagttccagttgtaaaggaaccagaacctgaaatcattacggaacctgtggat
gtgcctacgtttctgaaggctgctctggagaataaactgccagtagtagaaaaattcttg
tcagacaagaacaatccagatgtttgtgatgagtataaacggacagctcttcatagagca
tgcttggaaggacatttggcaattgtggagaagttaatggaagctggagcccagatcgaa
ttccgtgatatgcttgaatccacagccatccactgggcaagccgtggaggaaacctggat
gttttaaaattgttgctgaataaaggagcaaaaattagcgcccgagataagcctctgtcc
tcattcctagcgaatcagcagcgttttccaattttccagttgctcagcacagcgctgcat
gtggcggtgaggactggccactatgagtgcgcggagcatcttatcgcctgtgaggcagac
ctcaacgccaaagacagagaaggagataccccgttgcatgatgcggtgagactgaaccgc
tataagatgatccgactcctgattatgtatggcgcggatctcaacatcaagaactgtgct
gggaagacgccgatggatctggtgctacactggcagaatggaaccaaagcaatattcgac
agcctcagagagaactcctacaagacctctcgcatagctacattctga

>gi568815588r:90812869_91020349|GENSCAN_predicted_peptide_6|204_aa
MDKAGGHYSQQTNTGKENQTPHVLTYKWELNDENTCTQGGEHHTLGPVRGASLILNKSIS
ELKADWATESEMRFHHVAQVGLELLASKDPPAQLPKAPRLQLPAPKAGAAERALSTGALF
CSIPVALGKPLKNTDVRVCVQLQNWTRRCESPSNGPKAYVLKSLTIPSYENGFDPVDEGS
SSNGSSSNGSSMAVISPFSFFPFD

>gi568815588r:90812869_91020349|GENSCAN_predicted_CDS_6|615_bp
atggataaagctggaggccattattctcagcaaactaacacaggaaaagaaaaccaaaca
ccacatgttctcacttataagtgggagctgaacgatgagaacacatgcacacaaggaggg
gaacaccacacactggggcctgtcagaggtgcctccctaatactgaataaaagcatctca
gaacttaaagccgattgggccacagaatcagagatgaggtttcaccatgttgcccaagtt
ggtcttgaacttctggcctcaaaggatcctccagctcaactacccaaagctccaagacta
cagctgcctgcaccaaaagcaggtgcagctgagagggcactgtccacaggagccttattc
tgtagcattcctgtggctctagggaagcctctgaaaaacactgatgtcagggtgtgtgta
cagttacagaactggactagacgatgtgaaagcccttctaatggtccaaaagcctatgtt
ctgaagagcttaacaatacccagttatgaaaatggttttgatccagtggatgaaggtagt
tcaagtaatggcagttcaagtaatggcagttcaatggcagtaatttcaccttttagcttt
tttccctttgactag

>gi568815588r:90812869_91020349|GENSCAN_predicted_peptide_7|379_aa
MLALKKAKENMSECVHVCVSVVCQGPWEKDSGTKICTQVFTGECCGETTSVKGQMSVSRC
ALPSPHQGRALQVLVIMEPARVRSSGSLSAVLMSVTCGFLFFYSQLTGVSHSVTKNMDPL
NLLRQIFPLHWKACRSEKVRTIWEEGVGSSFGVAQKGNFGLLHDGPDVSDPVVWCPSLVN
AWSFITLHSFSFFIYKIIMERLLGLAINLSLQPIYQEIPLGTYTTRALGFKHKNWAAIWA
DTELAAGVFFTPQQHLEPQQEGTVHSPGKGSEAREPSGLAQQIPPQRRPDHNSLPAREQN
WMENEFDELTEVSFRKWVITNSSELKEHVLTQCKEAENLDKRLEELLTRLTSLEKNINDL
MELKNTAQELPEAYTSINS

>gi568815588r:90812869_91020349|GENSCAN_predicted_CDS_7|1140_bp
atgctggcactaaagaaggcaaaagagaatatgtctgagtgtgtgcatgtctgtgtgtct
gtggtatgtcaaggtccctgggaaaaagattctgggacaaagatttgcacgcaggtgttt
actggggagtgctgtggcgaaacaacatctgtaaaagggcagatgtcggttagcaggtgt
gctctgccctctcctcaccaaggcagagctttgcaggtgcttgtgattatggagccagca
agagttaggtcttctgggagcctttcagcggtactaatgtcagttacttgtgggttccta
tttttttacagtcaattaactggagtttcacacagtgttacgaaaaacatggatccatta
aacttacttaggcagatcttccctctgcactggaaggcctgcagatctgagaaggtgagg
acaatttgggaagaaggtgtgggaagctcatttggggtggctcagaaaggtaactttggg
ctacttcatgatggcccagatgtctctgatcctgtagtgtggtgccctagcctggtcaac
gcttggagttttataaccctccatagcttcagtttcttcatctataaaataatcatggag
cgtctactaggtcttgcaattaatctgtctttgcaacccatataccaggagattcccttg
ggtacctataccaccagggccctgggtttcaagcacaaaaactgggcagccatttgggca
gacactgagctagctgcaggagtttttttcacaccccagcagcacctggaaccccagcaa
gaaggaaccgttcactcccctggaaaggggtctgaagccagggagccaagtggtctagct
cagcagatcccaccccaacggagaccagatcacaactccttgccagcaagggaacaaaac
tggatggagaatgagtttgatgaattgacagaagtaagcttcagaaagtgggtaataaca
aactcttccgagctaaaggagcatgttctaacccaatgcaaggaagctgagaaccttgat
aaaaggttagaggaattgttaactagactaaccagtttagagaagaacataaatgacctg
atggagctgaaaaacacagcacaagaacttcctgaagcatacacaagtatcaatagctga

>gi568815588r:90812869_91020349|GENSCAN_predicted_peptide_8|239_aa
MWECLEFPRDLEGSEDRKMWESLELPRDLLNGFDQNADSDRDNKVWAEVVSDGDEELVGN
WSKGRSCYAKRLVAFCPCPRDLWNFELQRDNVGYLVEEISKQQSIQEVAGHKSSKILQPD
DAVEKKKPFSREKFKLATEICRTAVAVPTDYCTDSGTAELQNKTKCSAKFLLATWSKDGL
SSSVFAELTINHGYLSLFELSLATMGQDPSESLFQVGLPNQHRGTSTPPVIETIFDFSV

>gi568815588r:90812869_91020349|GENSCAN_predicted_CDS_8|720_bp
atgtgggaatgtttggaatttcctagagacttggagggctcagaagataggaagatgtgg
gaaagtttggaacttcctagggacttgttgaatggctttgaccaaaatgctgacagtgat
agggacaataaagtctgggctgaggtggtctcagatggagatgaggagcttgttgggaac
tggagtaaaggtcgttcttgctatgcaaagagactggtggcattttgcccctgccctaga
gatctgtggaactttgaacttcagagagataacgtggggtatctggtggaagaaatttct
aagcaacaaagcattcaagaggtggcagggcataaaagttcgaaaattttgcagcctgat
gatgcagtagaaaagaaaaaaccattttctagggagaaattcaagctagctacagaaatt
tgcagaactgctgtagctgtccctactgactactgcacagactcaggcactgctgagctc
caaaacaaaacaaaatgttccgcaaaattcctgctggccacttggtcaaaggatggtctc
tcttcatccgtctttgctgagctcactataaatcatggatatctgtctctctttgagctg
tctctggctacgatgggccaggacccttcagagagcctctttcaggttggacttcctaat
cagcatcgtggaacatccactcctccagtaatagaaaccatatttgatttttctgtttaa