GENSCAN 1.0	Date run:  5-Nov-116	Time: 02:48:56

Sequence gi568815591r:23405745_23621840 : 216096 bp : 42.24% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    490    681  192  2  0   63  113    88 0.436   7.34
 1.02 Intr +    732    854  123  1  0   41   44   102 0.016   0.74
 1.03 Intr +   2959   3046   88  2  1   63   70    48 0.017  -1.39
 1.04 Term +   9080   9866  787  2  1   78   36   872 0.029  72.81
 1.05 PlyA +  10486  10491    6                               1.05

 2.05 PlyA -  16567  16562    6                               1.05
 2.04 Term -  50707  50640   68  2  2   56   48    89 0.634  -1.18
 2.03 Intr -  55881  55664  218  2  2   49   96   155 0.642   9.62
 2.02 Intr -  62798  62738   61  0  1  134  105    70 0.989  10.17
 2.01 Init -  64366  64192  175  1  1   68   80   407 0.989  37.46
 2.00 Prom -  67667  67628   40                              -7.05

 3.03 PlyA -  68100  68095    6                               1.05
 3.02 Term -  68925  68192  734  1  2   66   55   337 0.533  20.84
 3.01 Init -  69053  68984   70  2  1   86   49    75 0.930   4.60
 3.00 Prom -  70339  70300   40                              -5.15

 4.00 Prom +  71308  71347   40                              -4.45
 4.01 Sngl +  84667  85470  804  0  0   56   38   709 0.921  56.26
 4.02 PlyA +  85638  85643    6                               1.05

 5.10 PlyA -  85801  85796    6                               1.05
 5.09 Term - 100069  99994   76  0  1   59   43   100 0.571  -1.07
 5.08 Intr - 100522 100394  129  0  0   18   95   169 0.825   9.49
 5.07 Intr - 101791 101676  116  1  2  107   52    98 0.999   6.43
 5.06 Intr - 107338 107150  189  1  0   37   84   176 0.491  10.96
 5.05 Intr - 110784 110619  166  2  1   58   83   109 0.207   6.44
 5.04 Intr - 116096 115963  134  2  2   58  111   104 0.265   8.22
 5.03 Intr - 126102 125976  127  2  1   44    0   192 0.236   5.76
 5.02 Intr - 126535 126447   89  1  2   47  105    48 0.712   0.25
 5.01 Init - 131900 131832   69  2  0   41   63    81 0.380   2.00
 5.00 Prom - 132854 132815   40                              -3.35

 6.03 PlyA - 134817 134812    6                               1.05
 6.02 Term - 157461 156834  628  2  1   33   34   693 0.040  51.24
 6.01 Init - 165656 165592   65  2  2   91   76    88 0.976   8.57
 6.00 Prom - 165811 165772   40                              -5.75

 7.04 PlyA - 167037 167032    6                               1.05
 7.03 Term - 180830 179318 1513  1  1   15   47  1526 0.873 130.19
 7.02 Intr - 191566 191373  194  1  2  -39   93   191 0.403   4.27
 7.01 Init - 208553 208419  135  2  0   44   53   151 0.081   7.39
 7.00 Prom - 214322 214283   40                              -3.25

 8.02 PlyA - 215082 215077    6                               1.05
 8.01 Term - 215867 215182  686  0  2   74   42   280 0.874  14.80

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +    732    880  149  1  2   41   49   135 0.823   1.98
S.002 Init - 208553 208415  139  2  1   44   66   169 0.902  10.65


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:23405745_23621840|GENSCAN_predicted_peptide_1|396_aa
XLDMYTVTGSAQPRKVSKVLAFLIGESKREASGKQNTNQIVSGIGFFQWVLGLADFKNEA
VDSHDVQMCPEFLPSSGFVVLLTSGVKPQTFAVSVTALKGSVDPKSTYPKELKAESQRDI
YSPTFTVALITIAKRSRPSVDISRPCPSVGIPTSAGPCPSVGITTSASPSPSVSITASIG
PHPSVSITASAGPVLQLVSPHHQVPSVSQHHPTRRSPSVSRLYHISRSRPSVGFTALPGP
VCQSASPHQQVPSVSRLHCNTRSRPSVGINASPGPYPSVGITASPSPCTSVSITTSAGPR
SSASPHPQVPSISRHHRIARSPSISRHHRIRRSPSVSRHHRIRRSPSVSRHHRIRRSPSV
SRHHCIRRSRPSVGITASAGPCLSAGVTESAVGYSL

>gi568815591r:23405745_23621840|GENSCAN_predicted_CDS_1|1191_bp
nccctggacatgtatacagttacaggaagtgcacaaccacgcaaggtatctaaggtcctt
gcttttctgattggagaatcaaaaagggaagcctcagggaaacaaaatactaatcaaatt
gtgtccggaattggtttcttccagtgggttctcggtctcgctgacttcaagaatgaagcc
gtggactcccacgatgttcagatgtgtccagagtttcttccttccagtgggttcgtggtc
ttgctgacttcaggagtgaagccgcagacctttgcagtgagtgttacagctcttaaaggt
agtgtggacccaaagagtacatacccaaaagaattgaaagcagagtctcaaagagatatt
tattcacctacattcacggtggcattgatcacaatagccaaaaggtcccgtccatcagtc
gacatcagcaggccctgtccgtcagtcggcatccccacatccgcaggtccctgtccatca
gtcggcatcaccacatctgcaagtccctctccgtcagtcagcatcactgcatccataggt
ccccatccgtcagtcagcatcactgcatctgcaggtcccgtccttcagttggtatcaccg
catcaccaggtcccatccgtcagtcagcatcaccccacccgcaggtccccatctgtcagt
cggctttaccacattagcaggtcccgtccgtcagtcggcttcactgcattaccaggtcct
gtctgtcagtcagcttcaccacatcagcaggtcccgtccgtcagtcggcttcactgcaac
accaggtcccgtccgtcagtcggcatcaacgcatcaccaggtccctacccatcagtcggc
atcaccgcatcaccaagtccctgtacgtcagtcagcatcaccacatccgcaggtccccgt
tcatcggcttcaccgcatccgcaggtcccgtccatcagtcggcatcaccgcatcgccagg
tccccctccatcagtcggcatcaccgcatccgcaggtccccctccgtcagccggcatcac
cgcatccgcaggtccccctccgtcagtcggcatcaccgcatccgcaggtccccctccgtc
agtcggcatcactgcatccgcaggtcccgtccgtcagtcggcatcaccgcatccgcaggt
ccctgtctgtcagccggcgtcactgaatcagcagttggttacagcctctag

>gi568815591r:23405745_23621840|GENSCAN_predicted_peptide_2|173_aa
MNKLYIGNLSENAAPSDLESIFKDAKIPVSGPFLVKTGYAFVDCPDESWALKAIEALSGK
IELHGKPIEVEHSVPKRQSCKEQPTGFADGLAEEYQKSEELQDFLARATGWKMVPFTKME
NIGRGADSWVENRNFGFDMVFLILTRNLSEEETNSSFLRRKLQEGPHFEEEFD

>gi568815591r:23405745_23621840|GENSCAN_predicted_CDS_2|522_bp
atgaacaaactgtatatcggaaacctcagcgagaacgccgccccctcggacctagaaagt
atcttcaaggacgccaagatcccggtgtcgggacccttcctggtgaagactggctacgcg
ttcgtggactgcccggacgagagctgggccctcaaggccatcgaggcgctttcaggtaaa
atagaactgcacgggaaacccatagaagttgagcactcggtcccaaaaaggcaaagctgt
aaggaacagccaacaggatttgctgatggattagctgaggagtatcagaaaagtgaagaa
ttgcaagattttttggccagagcaactgggtggaagatggtgccatttaccaaaatggag
aatattgggagaggagcagattcttgggtagaaaataggaactttggttttgatatggtg
tttctaatacttactagaaatttaagtgaagaagaaactaacagtagtttcttgcggagg
aaacttcaagaaggtccacattttgaggaggaatttgattaa

>gi568815591r:23405745_23621840|GENSCAN_predicted_peptide_3|267_aa
MAQIQNLRALDAGGREGTVRAPCALPPSFFLGGWGWGRAVKGQEKRERAEGNTVPPLNLN
KTNEGAKGYFRATKDGNPGAAPGPMNENQQTALAEAADGDRFPPSANRKRGEAPARSRGG
VSLDAGCSTWTRQAGPGERGSPALEPLLRASLAARPADPQGSARDSPPWVPSIPGPYGTP
RAHTQLRPEVREGRQTHAARCVPALAGGLRWGGAATARPHAPRIRTQPQEEPEARGPAAG
PRGRAVQWSRPSEASRRPTKDPPHCEP

>gi568815591r:23405745_23621840|GENSCAN_predicted_CDS_3|804_bp
atggcgcaaatccagaacctccgggcgctggacgctgggggaagggaagggaccgtgcgg
gcaccatgcgcgttacctccctctttcttccttgggggttggggctgggggcgagctgtt
aaagggcaggaaaaacgagagcgagcagaggggaacacagtcccacccctcaacctcaac
aaaaccaacgagggagcaaagggttattttcgcgccacaaaagatggaaatccaggggcg
gctccggggccaatgaatgaaaaccagcaaaccgctctggcggaggcggccgacggcgat
aggttccccccgtcagccaatcggaagcgaggagaggcccccgcccgcagcaggggcggt
gtctctctcgacgccggttgctcaacttggactcggcaagccggccccggggagcgcggg
agccccgccttggagccgcttttgcgcgccagtctcgcggcccgccccgcagacccgcag
ggttcggcgagggattctcccccgtgggtaccaagcatccctgggccctatggaacccct
cgtgcacacacgcaactgagaccagaggtgcgggagggtcgccaaacacacgctgcccgg
tgcgtccccgcgctggccggcggactcaggtggggtggcgcggcgacggcccggccacac
gctccgcgcatacggacgcagccccaggaggagccagaagcccgcggtcccgcggcaggg
ccccggggaagggcggtccagtggtccaggccctccgaggcgagccggcggccgacgaaa
gaccctccccactgtgagccgtga

>gi568815591r:23405745_23621840|GENSCAN_predicted_peptide_4|267_aa
MADDASAEGGGGRARAGGRVVWAPEAPGALGRGTDVTSAEGFSSGIRVRGHGRGWGRGRG
RGRGWGRGQDRGVRGGKAQDKERMPVTKLDGLAKDMKIKSLEEIYLFSLPIKESEIIDFF
LGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAGRVEVLQGGGRRHPRGHHPD
QALHCHRAQRLLGEQDRQAPHRPLQGDRPLRLCAGALHPRAQGHWHRLSSCAQEAAHDSW
YLRLLHLSQGLHCHPGQLRQRHLGCCL

>gi568815591r:23405745_23621840|GENSCAN_predicted_CDS_4|804_bp
atggcggatgacgccagtgcagagggcgggggcgggcgggcgcgggcgggcgggcgggtg
gtgtgggcgccggaggccccgggggccctgggaaggggaactgatgtgacttccgctgag
ggtttcagcagtggcatccgggtccggggtcacggccgtggatggggccggggccggggt
cgcggccgtggatggggccggggccaagaccgcggagttcgcggaggcaaggcccaggat
aaggagcggatgcccgtcaccaagctggacggcctggccaaggacatgaagatcaagtcc
ctagaggagatttatctcttctcgctgcccatcaaggaatctgagatcattgactttttc
ctgggggcctctctcaaggacgaggttttgaagattatgcctgtgcggaaggagacccgc
gccggccagcgcaccaggttcaaggcgtttgttgccatcagggactacaatggctacgct
ggtcgggttgaagtgctccaaggaggtggccgccgccatccgcggggccatcatcctgac
caagctctccattgtcaccgtgcgcagaggctactgggggaacaagatcggcaagctcca
caccgtcccttgcaaggtgacaggccgctgcggctctgtgctggtgcccttcatccccgc
gcccaggggcactggcatcgtctcagctcctgtgcccaagaagctgctcatgatagctgg
tatctacgactgctacacctcagccaggggctgcactgccaccctgggcaacttcgccaa
cgccaccttggatgctgtctctaa

>gi568815591r:23405745_23621840|GENSCAN_predicted_peptide_5|364_aa
MRELETPPISNIAPHAGSSPKLPNPLGQYLKGLRSYKAHLATEKSSKRLTRPSSGERLVD
MSDVEENNFEGRVSTKPREPSRRRPNARGFTGTSAESRSQSKSPTGTPARVKSESRSGSR
SPSRVSKHSESHSRSRSKSRSRSRRHSHRRYTRSRSHSHSHRRRSRSRSYTPEYRRRRSR
SHSPMSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTG
RSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGG
GGGGGGGGGGGGGGRRRDSYYDRGYDRGYDRYEDYDYRYRRRSPSPYYSRYRSRSRSRSY
SPSM

>gi568815591r:23405745_23621840|GENSCAN_predicted_CDS_5|1095_bp
atgagggaactggagacacctcctatttctaatattgctcctcatgcaggatcctctcct
aaactcccaaatccacttggacaatatttaaaggggctaaggtcatataaggctcatctg
gcgactgaaaagtcttcaaagaggttgacgcgtccgagttctggggagcgcctcgtcgac
atgagtgatgtggaggaaaacaacttcgagggcagagtgagtacaaagccgcgggagccg
tctaggcggcggcccaatgctcggggtttcacgggaacaagcgcggagtctcgctctcag
tcaaaatctccaacgggaactcctgctcgtgtaaaatcggagagcaggtcaggatctcgt
agtccatcaagggtttccaaacactctgaatcccattctcgatcaagatcaaaatccagg
tcgaggtcaaggagacattctcatagacgttacactcgatccagatcccactctcactct
cataggagacgatctcgaagtagatcatatacaccagaataccggcggcgaaggagccga
agccattctccaatgtctaaccggagaagacatactggcagcagggcaaatccagatccc
aacacttgccttggagtgtttggcctcagtttgtacacaacagagagggatcttcgtgaa
gtattttctcgatatggaccattgagtggtgtcaatgtggtttatgatcagcgaactggg
cgatctcgaggatttgcttttgtgtattttgagagaatagatgactcaaaggaggctatg
gaaagggcaaatggaatggagctggatggtagaagaattcgggtggattattctataacc
aagagagcgcacacaccaacaccaggcatctacatgggcagaccaactcatagtggtggg
ggtggtggaggaggcggcggcggtggaggtggaggtggtggcagacgtcgagattcttac
tatgatagaggatatgatcgtgggtatgacagatatgaagactatgattaccgatacaga
agacgatcaccttctccttattatagtcgatatagatcacgatcaagatctcgttcctac
agcccaagtatgtga

>gi568815591r:23405745_23621840|GENSCAN_predicted_peptide_6|230_aa
MAEKNPPAIVPAQEPPIGQISTNELKMGEFELAIVAGEFTDSEIMVMMLGENGMGKTTFI
RMLAGRLEPDEEGEVPVLNVSYKLQKISPKSTGSVRQLLREKIRDAYTHPQFVTNVMKPL
QIENIIDQEVQTLSGGELQRVALALCLGKPADVYLIDEPSAYLDSEQRLMAARVVKRFIL
HAKKTAFVVEHDFIMATYLADHVIIFDGVPSTKNTVANSPQTLLAGMNTF

>gi568815591r:23405745_23621840|GENSCAN_predicted_CDS_6|693_bp
atggctgaaaagaaccctccagcaatcgtccctgcacaggaacctccaattggacaaatc
tccacgaatgaattaaaaatgggagagtttgagctagcaattgtagctggagagtttaca
gattctgaaatcatggtgatgatgctaggggaaaatggaatgggtaaaacgacatttatc
agaatgcttgctggaagacttgaacctgatgaagaaggagaagtaccagttctaaatgtc
agttataagttacagaaaattagtcctaaatcaactggaagtgttcgccagttactacgt
gaaaagataagagatgcttatacacatccacaatttgtgactaatgtaatgaagcctctg
caaattgaaaacatcatcgatcaagaggtgcagacattatcgggtggtgaactacagcga
gtagctttagccctttgtttgggcaaacctgctgatgtctatttaattgatgaaccatct
gcatatttggattctgagcaaagactgatggcagctcgagttgtcaaacgtttcatactt
catgcaaaaaagacagcctttgttgtggaacatgacttcatcatggccacctatctagcg
gatcatgtcatcattttcgatggtgttccatctactaagaacacagttgcaaacagtcct
caaacccttttggctggcatgaatacattttag

>gi568815591r:23405745_23621840|GENSCAN_predicted_peptide_7|613_aa
MESTGEDVVDTVEMTTKDLEYYVNFIDKAAVGFVWTDSNFERSSTNEEAAARASSRPAPT
LGQNDAAARQPERAAGSSVLEDEPARGIPSALTRCRRWKKGSGVLFPTLRVFENANTGNR
PTVKERRAGLKQSPRTGLEVPGSRVGGGGAALHRRGGAGTPAAVPPPSWTSCGTSARAWP
PERCLILEGTIPQSEAAGGVTVNTIGAENKQRRSRSWSSSSDRTRRRRREDSYHVRRRCS
RTFSRSSSQHSSRKAKSVEDDTEGHLIYHVGDWLQERYEIVSTLGKGTFGRVVQCVDHRR
RGARVALKIIKNVEKYKEAARLEIKVLEKINEKDPGKNLCVQMFDWFDYHGHMCISLELL
GLSTFDFLKDNNHLPYPIHQVHHMASQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELT
YNLEKKRHERSVKSTAVRVGDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWS
IGCIIFEYYVGFTLFQTHDNRQHLATMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTS
AGRYVRENCKPLRQYLTSEAEEDHQLFDLIESMLEYEPAQRLTLGEALQHPFFSRLWAEP
PNKLWDSSQDISP

>gi568815591r:23405745_23621840|GENSCAN_predicted_CDS_7|1842_bp
atggaatctactggtgaagatgttgtggacactgttgaaatgacaacaaaggatttagaa
tattatgtaaactttattgacaaggcagcagtaggatttgtgtggactgactccaatttt
gaaagaagttctaccaatgaggaagcggcggcacgtgcttccagccgccctgcacctacc
ctgggtcagaacgacgcagctgcgcggcaaccagagagggcggcggggtcttctgtgttg
gaagatgagcccgccagaggcataccctcggccttaactcgctgcaggcgctggaagaag
ggctctggcgtcttgttcccgaccctccgagtttttgaaaacgccaatactggaaacagg
ccgacagttaaggagaggcgggcgggactgaagcagagcccgagaacggggctggaggtc
ccagggtcccgggttggtgggggtggagcagcacttcatcgccgcgggggtgctgggact
ccggccgcagtgccgccgccatcatggacttcctgtgggacaagcgcacgggcctggccg
ccagaaagatgcctcatcctcgaaggtaccattcctcagagcgaggcagccgggggagtt
actgtgaacactatcggagccgaaaacaagcaacgaagaagccgttcctggtcaagtagt
agtgaccggacacgacggcgccggcgagaggacagctaccatgtccggaggaggtgcagc
cggacatttagccgctcgtcttcgcagcacagcagccggaaagccaagagtgtagaggac
gacactgagggccacctcatctaccatgtcggggactggctacaagagcgatatgaaatc
gtcagcaccttaggaaaggggaccttcggccgagttgtacaatgtgttgaccatcgcagg
cgtggggctcgagttgccctgaagatcattaagaatgtggagaagtataaggaagcagct
cgacttgagatcaaagtgctggagaaaatcaacgagaaagaccctggcaagaacctctgt
gtccagatgtttgactggttcgactaccatggccacatgtgtatctccttggagcttctg
ggccttagcaccttcgatttcctcaaagacaacaaccacctgccctaccccatccaccaa
gtgcaccacatggcctcccagctgtgccaggctgtcaagttcctccatgataacaagctg
acacatacagacctcaagcctgaaaatattctgtttgtgaattcagactatgagctcacc
tacaacctagagaagaagcgacatgagcgcagtgtgaagagcacagctgtgcgggtggga
gactttggcagtgccacctttgaccatgagcaccatagcaccattgtctccactcgccat
taccgagcaccagaagtcatccttgagttgggttggtcacagccttgtgatgtgtggagt
ataggctgcatcatctttgagtactatgtgggcttcaccctcttccagacccatgacaac
agacagcatctagccacgatggaaaggatcttgggtcctatcccttcccggatgatccga
aagacaagaaaacagaaatatttttaccggggtcgcctggattgggatgagaacacatca
gctggacgctatgttcgtgagaactgcaaaccgctgcggcagtatctgacctcagaggca
gaggaagaccaccagctcttcgatctgattgaaagcatgctagagtatgaaccagctcag
cggctgaccttgggtgaagcccttcagcatcctttcttctcccgcctttgggctgagcca
cccaacaagttgtgggactccagtcaggatatcagtccgtga

>gi568815591r:23405745_23621840|GENSCAN_predicted_peptide_8|228_aa
XLEVLARAIRQEKEIKSIQLGKEEVQLSLFADDMIVYLENPIISAQNLLKVISNFSKVSG
YNINVQKSQAFLYTNNTQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLN
EIKEDTNKWKNIPCSWIGRINIVKMAILAKVIYRLNAIPIKLPMTFFTELEKTTLKFIWN
QKRARIAKSVLSQKNKAGGITLPDFKLYYKATVTKTAWDWYQNRDTYQ

>gi568815591r:23405745_23621840|GENSCAN_predicted_CDS_8|687_bp
ntgttggaagttctggccagggcaatcaggcaggagaaagaaataaagagtattcaatta
ggaaaagaggaagtccaattgtccctgtttgcagatgacatgattgtatatctagaaaac
cccatcatctcagcccaaaatctccttaaggtgataagcaacttcagcaaagtctcagga
tacaatatcaatgtgcaaaaatcacaagcattcttatacaccaataacacacaaacagag
agccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacttagga
atccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaac
gaaataaaagaggatacaaacaaatggaagaacattccatgctcatggataggaagaatc
aatatcgtgaaaatggccatactggccaaggtaatttatagattgaatgccatccccatc
aagctaccaatgactttcttcacagaattggaaaaaactactttaaagttcatatggaac
caaaaaagagcccgcattgccaagtcagtcctaagccaaaagaacaaagctggaggcatc
acactacctgacttcaaactatactacaaggctacagtaaccaaaacagcatgggactgg
taccaaaacagagatacataccaatag