GENSCAN 1.0	Date run:  8-Nov-116	Time: 11:20:43

Sequence gi568815577r:36360979_36561695 : 200717 bp : 46.58% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3178   3281  104  0  2   84   82    38 0.544   1.77
 1.02 Intr +   8010   8898  889  0  1   42  105   541 0.972  42.52
 1.03 Intr +  11396  11553  158  1  2   44   85   125 0.964   6.61
 1.04 Term +  14165  14318  154  2  1   71   39   136 0.990   4.39
 1.05 PlyA +  14983  14988    6                              -0.45

 2.00 Prom +  15333  15372   40                              -4.26
 2.01 Init +  24374  24473  100  1  1   41   96   196 0.719  14.12
 2.02 Intr +  25184  25284  101  0  2    1   59   150 0.676   3.23
 2.03 Intr +  26620  26752  133  0  1   38  101    82 0.995   4.72
 2.04 Intr +  30573  30690  118  1  1   59   35   157 0.923   7.02
 2.05 Intr +  33569  33672  104  2  2   76   94    69 0.887   6.12
 2.06 Intr +  36437  36533   97  0  1   86   99    -7 0.492  -0.73
 2.07 Intr +  38543  38627   85  2  1   49   60    76 0.451   0.72
 2.08 Intr +  41780  41873   94  1  1   48   89    68 0.369   2.44
 2.09 Intr +  50485  50626  142  2  1   89  101   170 0.999  17.81
 2.10 Intr +  51852  52337  486  0  0   35  111   214 0.307  10.53
 2.11 Intr +  54317  54411   95  2  2   39  111    34 0.730   0.41
 2.12 Term +  55545  55675  131  1  2   68   47    83 0.489   0.54
 2.13 PlyA +  58016  58021    6                               1.05

 3.02 PlyA -  60242  60237    6                              -0.45
 3.01 Sngl -  61789  61412  378  1  0   46   49   268 0.822  14.88
 3.00 Prom -  65817  65778   40                              -4.26

 4.04 PlyA -  67083  67078    6                               1.05
 4.03 Term -  72242  72157   86  0  2   62   35    95 0.253  -0.58
 4.02 Intr -  83463  83305  159  1  0   70   72   115 0.407   8.06
 4.01 Init -  85065  85044   22  0  1   97   87    12 0.641   1.86
 4.00 Prom -  97534  97495   40                              -3.56

 5.02 PlyA -  97541  97536    6                               1.05
 5.01 Sngl - 100717  99998  720  1  0  110   47  1170 0.998 109.33
 5.00 Prom - 116748 116709   40                               1.14

 6.04 PlyA - 117129 117124    6                               1.05
 6.03 Term - 125920 125341  580  0  1   68   49   297 0.108  17.76
 6.02 Intr - 132619 132514  106  2  1  122   18    42 0.001  -0.13
 6.01 Init - 148277 148247   31  2  1  105   80    50 0.555   5.84
 6.00 Prom - 160953 160914   40                              -3.66

 7.00 Prom + 161196 161235   40                              -7.86
 7.01 Init + 162927 163026  100  2  1   69   60    71 0.503   2.83
 7.02 Term + 167880 168022  143  1  2  136   39    66 0.807   4.59
 7.03 PlyA + 168856 168861    6                               1.05

 8.00 Prom + 170594 170633   40                              -3.06
 8.01 Init + 188391 188464   74  2  2   52   90   141 0.926  11.24
 8.02 Intr + 190307 190383   77  2  2   -9   79    76 0.499  -3.84
 8.03 Intr + 192671 192994  324  0  0   63   22   211 0.374   7.75
 8.04 Intr + 193352 193460  109  0  1   74   96    50 0.503   3.74

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815577r:36360979_36561695|GENSCAN_predicted_peptide_1|434_aa
ESVPRRHLSEGTNSYATRLLNNHQVPPQSEPESNSLKRRLSTRSSILNAKNRRLSSQFEN
SVYKGDDDDEDVIILEENSTPKPAVDHDIDMKSEQSHVEQGGVQVEFVGDSEPCGQTGST
STSSSRCDQGNTAATQTEVPSLVVKKEETVEDEIDVRNDAVILPSCVEAEAKIHETQETT
DKSADDAGCQLQELRNQLLLVTEEKENYKRQCHMFTDQIKVLQQRILEMNDKYVKKETCH
QSTETDAVFLLESINGKSESPDHMVSQYQQALEEIERLKKQCSALQHVKAECSQCSNNES
KSEMDEMAVQLDDVFRQLDKCSIERDQYKSEVELLEMEKSQIRSQCEELKTEVEQLKSTN
QQTATDVSTSSNIEESVNHMDGESLKLRSLRVNVGQLLAMIVPDLDLQQVNYDVDVVDEI
LGQVVEQMSEISST

>gi568815577r:36360979_36561695|GENSCAN_predicted_CDS_1|1305_bp
gaaagtgttccaagaagacatctttcagaaggaacaaattcttatgcgacaagacttcta
aataatcatcaagttccacctcagtctgaacctgagagcaacagcttgaaacggagactt
tctactcgttcctcaattttgaatgcaaagaatcggagattgagtagtcagtttgaaaat
tcagtttataaaggtgatgatgatgatgaagatgtcatcatcttagaagaaaacagtacc
cccaaacctgcagtagatcatgatattgacatgaaatcagaacagagtcacgttgagcaa
ggtggtgttcaggttgagtttgtgggtgacagtgaaccttgtggccagactggttcaaca
agcacctcatcatcccgatgcgaccagggaaatactgcagctacccagactgaagtacca
agtttagttgttaaaaaagaagaaactgttgaagacgagatagacgtaagaaatgatgca
gtgattctgccctcctgtgtagaagctgaagcaaagatacatgaaacccaggaaaccacc
gataaatctgcagatgatgcaggctgccaattacaagaactgagaaaccagctactcctt
gtcactgaggaaaaagagaattataaaagacagtgtcatatgtttactgatcaaatcaaa
gtgttacaacagaggatactagaaatgaatgacaagtatgttaagaaagaaacttgccat
cagtccactgaaaccgatgctgtatttttacttgaaagtattaatggcaaatctgaaagt
ccagaccatatggtatctcagtatcagcaagctttggaagaaatagaaaggctgaaaaaa
caatgtagtgctttgcaacatgtaaaggctgaatgcagccagtgttccaataatgagagt
aaaagtgaaatggatgagatggctgtgcagcttgacgatgtgtttagacaactggacaaa
tgcagtattgagagggaccagtataaaagtgaggttgaattgctggaaatggaaaagtca
caaatccgttcacagtgtgaagaactcaaaactgaagtagaacagttaaaatctacaaat
caacagacggcaacagatgtttcaacatcaagtaacattgaggagtctgtaaatcatatg
gatggagaaagcctcaaactccgatctcttcgagttaacgtaggacaactgctggctatg
attgtgcctgatcttgatcttcagcaagtgaattacgatgttgatgtagttgatgagatt
ttaggacaagttgttgaacaaatgagtgaaatcagtagtacttaa

>gi568815577r:36360979_36561695|GENSCAN_predicted_peptide_2|561_aa
MRSRPCGGGACGAREAARAAREVTVPLTVRVPPAWHNKEPVYSLDFQHGTAGRIHRLASA
GVDTNVRIWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPTGEILASGGDDAVILLWKV
NDNKEPEQIAFQDEDEAQLNKENWTVVKTLRGHLEDVYDICWATDGNLMASASVDNTAII
WDVSKGQKISIFNEHKSYVQGVTWDPLGQYVATLSCDRVLRVYSIQKKRVAFNVSKMLSG
IGAEGEARSYRMFHDDSMKSFFRRLSFTPDGSLLLTPGVELMSLPYRLVFAVASEDSVLL
YDTQQSFPFGYVSNIHYHTLSDISCRCESVGKVCNFSLFWGRRSSDGAFLAISSTDGYCS
FVTFEKDELGIPLKEKPVLNMRTPDTAKKTKSQTHRGSSPGPRPVEGTPASRTQDPSSPG
TTPPQARQAPAPTVIRDPPSITPAVKSPLPGPSEEKTLQPSSQNTKAHPSRRVTLNTLQA
WSKTTPRRINLTPLKTDTPPSSVPTSVISTPSTEEIQSEIWMLLYSVSIFNLGHERFNVV
NPLFDEFLKLERFNVIQCENQ

>gi568815577r:36360979_36561695|GENSCAN_predicted_CDS_2|1686_bp
atgaggtcccgcccatgcgggggcggggcctgcggcgcgcgggaagcggcgcgcgctgcg
cgggaggtgacggtgcctctgactgtccgggtccctccagcctggcacaacaaggagccc
gtgtacagcctggacttccagcatgggacggctgggaggatccacagactggcgtctgcc
ggcgtggacaccaatgtcaggatctggaaggtagaaaagggaccagatggaaaagccatc
gtggaatttttgtccaatcttgctcgtcataccaaagccgtcaatgttgtgcgtttttct
ccaactggggaaattttagcatcgggaggagatgatgctgtcatcctattgtggaaggtg
aatgataacaaggagccggagcagatcgcttttcaggatgaggacgaggcccagctgaac
aaggagaactggacggttgtgaagactctgcggggccacttagaagatgtgtatgatatt
tgctgggcaactgatgggaatttaatggcttctgcctctgtggataacacagccatcata
tgggatgtcagcaaaggacaaaagatatcaatttttaatgaacataaaagttatgtccaa
ggagtaacctgggaccctttgggtcaatatgttgctactctgagctgtgacagggtgctg
cgagtatacagtatacagaagaagcgtgtggctttcaatgtttcgaagatgctgtctgga
ataggggctgaaggagaggcaagaagctaccggatgtttcacgacgacagcatgaagtct
ttcttccgtagactgagtttcactcccgacggatctttgcttctcacgccaggtgtggag
ctgatgagtctgccctaccgcctggtgtttgctgtggcctcggaggattccgtgcttctg
tatgacacccagcagtccttcccttttggttacgtgtctaatatacattaccacaccctc
agtgacatttcatgtagatgtgagagtgttggtaaggtctgtaacttttccctgttttgg
ggacgaaggtccagcgatggtgccttcctggccatttcttccacggacggttactgctca
tttgtgacatttgagaaagatgaacttggaattcctttgaaagagaagccagttttgaac
atgagaactcctgatacagcaaagaaaaccaagagtcagacacatcgagggtcttcgcca
ggacccagaccggtagagggaacccctgccagcagaacccaagaccccagcagccccggc
acgactccccctcaggccagacaggccccagccccaacagtcatcagggaccctccctcc
atcactcctgctgtcaaaagccccttgccggggccttcggaggagaagaccctgcagccc
agtagtcaaaacacaaaagcccacccatcccggagggtcactctgaacacactgcaagcc
tggagcaagacaacaccccggagaataaacttaacacccttaaagacggacactccacca
agttctgtaccaaccagtgtgatttccaccccttctacagaagaaattcagtcagaaata
tggatgctgttgtattcagtatccatttttaacttgggacatgaacgttttaacgtagta
aatcctctttttgatgagtttctgaaactggagcggttcaacgttatccagtgtgaaaat
cagtga

>gi568815577r:36360979_36561695|GENSCAN_predicted_peptide_3|125_aa
MWRGSGPVTSRIRRQATSKAALNIEDSVEIKRTNNSNASGVNDNQQTCQSWRHGRTLDGT
VTGTAAYLIRGRQGIHSSFQQQSPTESRDKRPGPGKETGTGLFGASRREGLAIPPPSGFR
KCPAC

>gi568815577r:36360979_36561695|GENSCAN_predicted_CDS_3|378_bp
atgtggcggggcagtggcccagtgacatcaaggattaggagacaggccacgtctaaggcg
gccttgaatatcgaggattctgtggaaatcaaaaggacaaacaactcaaatgcctctggt
gtcaacgacaaccagcagacatgtcagtcctggaggcatggtcggactctggatgggaca
gtcacgggaacagctgcctatctgataaggggccgccagggaattcacagcagtttccaa
cagcagagccccacagagagcagggacaagagacctgggcccgggaaggagacagggaca
ggactctttggggcaagtaggagagaaggattagcaataccgccccctagtggcttccgc
aagtgcccggcctgttag

>gi568815577r:36360979_36561695|GENSCAN_predicted_peptide_4|88_aa
MGNRSIERTWMKLEAIILSRQTQEQKTKRLMYSLISGSRTMRTRGHREGNITHRGLSGVE
ECGSSDKFDQFPAVICTATRQCLSYHYE

>gi568815577r:36360979_36561695|GENSCAN_predicted_CDS_4|267_bp
atggggaacagaagtattgaaaggacatggatgaagctggaagccatcatcctcagcaga
caaacacaggaacagaaaaccaaacgcctcatgtactcactcataagtggaagtcgaaca
atgagaacacgtggacacagggaggggaacatcacacaccggggcctgtcgggggtggag
gaatgtggatcttcagacaagtttgatcagttcccagctgtcatctgtacagccacacga
cagtgcctttcttaccattatgagtaa

>gi568815577r:36360979_36561695|GENSCAN_predicted_peptide_5|239_aa
MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG
IYQCQIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPAKTTFAIL
GGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGTL
LCLSCQDEAPYRPYQAPPRATTTTANTAPAYQPPAAYKDNRAPSVTSATHSGYRLNDYV

>gi568815577r:36360979_36561695|GENSCAN_predicted_CDS_5|720_bp
atggccagcacggccgtgcagcttctgggcttcctgctcagcttcctgggcatggtgggc
acgttgatcaccaccatcctgccgcactggcggaggacagcgcacgtgggcaccaacatc
ctcacggccgtgtcctacctgaaagggctctggatggagtgtgtgtggcacagcacaggc
atctaccagtgccagatctaccgatccctgctggcgctgccccaagacctccaggctgcc
cgcgccctcatggtcatctcctgcctgctctcgggcatagcctgcgcctgcgccgtcatc
gggatgaagtgcacgcgctgcgccaagggcacacccgccaagaccacctttgccatcctc
ggcggcaccctcttcatcctggccggcctcctgtgcatggtggccgtctcctggaccacc
aacgacgtggtgcagaacttctacaacccgctgctgcccagcggcatgaagtttgagatt
ggccaggccctgtacctgggcttcatctcctcgtccctctcgctcattggtggcaccctg
ctttgcctgtcctgccaggacgaggcaccctacaggccctaccaggccccgcccagggcc
accacgaccactgcaaacaccgcacctgcctaccagccaccagctgcctacaaagacaat
cgggccccctcagtgacctcggccacgcacagcgggtacaggctgaacgactacgtgtga

>gi568815577r:36360979_36561695|GENSCAN_predicted_peptide_6|238_aa
MADTGSAFTAGLEELSFPCSLKLTLACSVLSFLDYKNLKDQTCRPRHRPHPVQATHRPTQ
GQDHLLHWHPHGPSGSEALTGQESQDAYHCLRGKPKGNEKDLVKLAKFLKKEKVNVDMIN
LGEEEVNREKLTAFVNTLNGKDGSGSHLVAVPPGPSLADALISSPILAGEGGAMLGLGAS
DFEFGVDPSADPQLALALGFLWRSSSSGRMRSPDEQLQPLLLRPGLLQLGLKAQTRSC

>gi568815577r:36360979_36561695|GENSCAN_predicted_CDS_6|717_bp
atggcggacaccggaagtgccttcacagcaggactggaagaactgagcttcccttgctcc
ttgaagctgacactggcatgcagtgtcctgagttttctggattataagaacctcaaagat
cagacctgcaggcccagacaccggccgcatcctgtccaagctacacaccgtccaacccaa
gggcaagatcaccttctacactggcatccacatggcccatctggctctgaagcgctgacg
gggcaagaatcacaagacgcatatcattgccttcgtgggaagcccaaaggcaatgagaag
gatctggtgaaactggctaaattcctcaagaaggagaaagtaaatgttgacatgataaat
ttgggggaagaggaggtgaacagagaaaagctgacagcctttgtaaacacgttgaatggc
aaagatggaagcggttctcatctggtggcagtgcctcctgggcccagcttggctgatgct
ctcatcagttctccgattttggctggggaagggggtgccatgctgggtctcggtgccagt
gactttgaatttggagtagatcccagtgctgatcctcagctggccttggccctcgggttt
ctatggaggagcagcagcagcggcaggatgaggagcccagacgagcagctgcagcctctg
ctgctgaggccaggattgctacaactgggactgaaggctcagacgaggtcctgctga

>gi568815577r:36360979_36561695|GENSCAN_predicted_peptide_7|80_aa
MLQPCRLLECDLRDTKQHSYHPECQFQTLNGDTGSICCSVSRNPAWPSTKPEEDASSAAA
DSIQQQNSKQGGHLPRRLPP

>gi568815577r:36360979_36561695|GENSCAN_predicted_CDS_7|243_bp
atgctccagccctgccggctcctggagtgtgacctgagggacacaaagcagcactcttac
caccctgaatgccagttccaaacactgaatggggacacaggcagcatctgctgtagtgtg
agccgcaaccctgcctggccctccaccaagcctgaggaggacgcgagctcggctgcggct
gacagcattcagcagcagaactccaagcaagggggtcacctgcccaggagactaccccct
tag

>gi568815577r:36360979_36561695|GENSCAN_predicted_peptide_8|195_aa
MLQNEKDVFGVEKEIDEEKERVAPGEDPSEISEQMHCSLRTGFIPGASASPKQKTAKLLT
LAVSLLAPRRTCYSQQDLLQSAAPAKKIFLLPFMVRTTVCEMRDEAWPAHIIPSVETKVT
PSWMLIAMLTLFSHRPENVDVIVHIIGYGEYSVLDSPGGLVPGAPGTQTQSQKKGLSRYN
HNTGLQVPREESRGS

>gi568815577r:36360979_36561695|GENSCAN_predicted_CDS_8|585_bp
atgctgcaaaatgagaaagatgtatttggtgttgaaaaggaaattgatgaggagaaggag
cgtgtggcccccggggaggaccccagtgagatctccgagcagatgcactgttccctgcgg
acaggatttattcctggagcctctgcctcccccaagcagaagacagctaaacttctgaca
ttggcggtctcactgctagcccctagaaggacctgctacagtcagcaggacctgctacag
tcagcagcacctgccaagaagatattcttactcccctttatggtgaggacaactgtgtgt
gagatgagggatgaggcatggccggcccacatcattccatctgtggagacaaaagtgact
ccatcttggatgctaatcgccatgttgactctgtttagccaccgccctgagaatgttgat
gtcatcgtgcatatcattggctatggcgaatatagcgtcctcgacagtcctggaggcctg
gtccctggcgctccaggaacacagacccagtctcaaaagaagggcttgtccaggtacaac
cacaacacagggttacaggtgccccgtgaggaaagcagaggcagn