GENSCAN 1.0	Date run:  6-Nov-116	Time: 23:04:52

Sequence gi568815593f:176989603_177197673 : 208071 bp : 47.25% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    116    111    6                               1.05
 1.02 Term -    801    743   59  1  2   83   42    73 0.155   0.05
 1.01 Init -   3414   3366   49  0  1   86   58    53 0.264   1.22
 1.00 Prom -   5091   5052   40                               0.74

 2.03 PlyA -   9255   9250    6                               1.05
 2.02 Term -  16353  16147  207  0  0   85   48   110 0.599   4.04
 2.01 Init -  17227  16937  291  1  0   52  102   130 0.739   5.95
 2.00 Prom -  25280  25241   40                              -5.76

 3.00 Prom +  30321  30360   40                              -4.16
 3.01 Init +  33137  33295  159  1  0   95   80   203 0.973  18.98
 3.02 Intr +  33558  33632   75  2  0   90  119    50 0.969   8.01
 3.03 Term +  34105  34263  159  0  0  119   42    91 0.899   5.54
 3.04 PlyA +  41155  41160    6                               1.05

 4.00 Prom +  41251  41290   40                              -5.36
 4.01 Init +  50278  50347   70  0  1   74   98    36 0.919   2.41
 4.02 Intr +  51524  51627  104  0  2  105   85    80 0.993   9.29
 4.03 Intr +  52176  52268   93  2  0   88   90    55 0.980   5.86
 4.04 Intr +  54718  54931  214  0  1   51   79   210 0.802  14.69
 4.05 Intr +  61101  61334  234  1  0   84   94   184 0.605  16.26
 4.06 Intr +  72456  72549   94  1  1   65  100   101 0.706   8.02
 4.07 Intr +  75904  76007  104  1  2   91   51    73 0.165   3.72
 4.08 Intr +  99948 100091  144  1  0   64   52   141 0.164   8.35
 4.09 Intr + 100788 101051  264  1  0  124   83   181 0.921  18.68
 4.10 Intr + 101143 101223   81  2  0   46   86    54 0.576   0.61
 4.11 Intr + 101336 101502  167  0  2   52  100   268 0.941  24.08
 4.12 Intr + 102083 102206  124  1  1   77   80   178 0.963  16.06
 4.13 Intr + 102719 102909  191  0  2   77   93   398 0.999  38.50
 4.14 Intr + 103044 103182  139  2  1   71   99   219 0.778  21.34
 4.15 Intr + 103536 103729  194  1  2   -7   84   228 0.846  12.11
 4.16 Intr + 103804 103949  146  0  2   20   85    63 0.972  -1.72
 4.17 Intr + 104052 104173  122  0  2   91  113   133 0.875  16.24
 4.18 Intr + 105728 105838  111  0  0   96   81   228 0.776  23.25
 4.19 Intr + 105931 106121  191  2  2  125   87   249 0.988  27.80
 4.20 Intr + 106455 106577  123  2  0   76   64   218 0.841  18.98
 4.21 Term + 106685 106759   75  1  0  120   47    81 0.999   5.04
 4.22 PlyA + 106788 106793    6                              -5.32

 5.06 PlyA - 106862 106857    6                              -8.24
 5.05 Term - 107089 106945  145  0  1   54   48    83 0.696  -1.72
 5.04 Intr - 107536 107241  296  1  2  -44    5   903 0.682  64.61
 5.03 Intr - 108472 108403   70  0  1  105   48    96 0.604   6.48
 5.02 Intr - 127477 127316  162  0  0   60   40   162 0.133   7.69
 5.01 Init - 142791 142475  317  0  2   31  -38   345 0.026  11.01
 5.00 Prom - 145344 145305   40                             -11.63

 6.00 Prom + 145417 145456   40                              -8.66
 6.01 Init + 145502 146428  927  1  0   81   52   555 0.662  45.09
 6.02 Intr + 179724 179826  103  2  1   15  106    93 0.184   3.55

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  89780  89902  123  1  0   97   48    75 0.820   2.78
S.002 Sngl - 142791 142258  534  0  0   31   42   332 0.967  16.97


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:176989603_177197673|GENSCAN_predicted_peptide_1|35_aa
MGFRHVGHAGLQLLISVLKSGKCKIKVPDEGLHCA

>gi568815593f:176989603_177197673|GENSCAN_predicted_CDS_1|108_bp
atggggtttcgccatgttggccatgctggtctccaactcctgatctcagttctgaagtct
ggtaaatgtaagatcaaggtgcctgatgagggcttgcactgtgcttaa

>gi568815593f:176989603_177197673|GENSCAN_predicted_peptide_2|165_aa
MAPPRRGLVKSPRAAPAPAPRACLWHRTRAPLPLPPRSQRVAARDPRQPGEGLQSGLRQR
VSTRRLRTAPPTPPCLLFFLSGSAARYSPGGALPDAKGRRVSRCLGSAAGFSSATAGGLV
PCRSVNGARVPGSSGAGFESQQLDSSVLSFNHYIAPRYRNDTRKK

>gi568815593f:176989603_177197673|GENSCAN_predicted_CDS_2|498_bp
atggctcccccgcggcgggggttggttaagtctccgcgcgctgcgcctgcgcccgccccg
agagcgtgtctctggcatcggacgcgcgcgcccctccccctccccccgcgctcccaacgt
gtggcggctcgcgacccccggcaacccggagaaggtctacagagcggcctgcgccagcga
gtgagtacccgccgcctgcgcacagctccgcccacccctccctgcctccttttcttcctc
agcgggtccgcggcccgctactctccgggaggggcgcttcccgacgccaagggccggcgc
gtttccaggtgcttaggcagcgccgcaggcttctcgagcgccacagccggcgggctggtg
ccctgccgctcagttaacggggcgcgagtcccgggcagtagtggagctggatttgaatcc
cagcagctggactccagtgttctttcatttaatcactacatcgcaccgagatatagaaat
gacacccggaaaaagtga

>gi568815593f:176989603_177197673|GENSCAN_predicted_peptide_3|130_aa
MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPRSFSHIR
GLSSLYSSCRRPTVFAIPSQLLDANPDVQELYLGFSANLVRYLEGNQISPVICLLAEQTC
LRKFNMLFVN

>gi568815593f:176989603_177197673|GENSCAN_predicted_CDS_3|393_bp
atggagtatcccgcgccggccacggtgcaggccgcggacggcggagcggccgggccttac
agcagctcggagttgctggagggccaggagccggacggggtgcgctttgaccgcgagagg
gcgcgccgcctgtgggaagccgtgtccggtgcccagccgcgcagtttttcccacattcga
ggactgtcatccctatactcgtcctgtcggagacctacagtctttgccatcccgagccag
ctgcttgatgctaacccagatgtacaagaactctatctgggcttctctgctaaccttgtc
aggtatctggagggaaatcagatttctccagtgatttgtttgcttgctgagcagacttgt
cttcgaaagtttaatatgctatttgtgaactga

>gi568815593f:176989603_177197673|GENSCAN_predicted_peptide_4|994_aa
MIELMPWPGAVAHACNPSTLEGQVEHMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSK
KHANKVKRYLAIHGMETLKGETKKLDSDQWGTIEDFLVGQWYDQTCVLSSNQKSSRSKDK
NQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALSKRLTNPFLVASTLALHQ
NREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAG
KGYPCKTCKIVLNSIEQYQAHVSGFKHKNHGPLAQFAVVLAFPIIHRVISGSQGKKERAD
AGFYRRQLVGSPAWVPESCEKEMRLLLALLGVLLSVPGPPVLSLEASEEVELEPCLAPSL
EQQEQELTVALGQPVRLCCGRAERGGHWYKEGSRLAPAGRVRGWRGRLEIASFLPEDAGR
YLCLARGSMIVLQNLTLITGDSLTSSNDDEDPKSHRDPSNRHSYPQQAPYWTHPQRMEKK
LHAVPAGNTVKFRCPAAGNPTPTIRWLKDGQAFHGENRIGGIRLRHQHWSLVMESVVPSD
RGTYTCLVENAVGSIRYNYLLDVLERSPHRPILQAGLPANTTAVVGSDVELLCKVYSDAQ
PHIQWLKHIVINGSSFGADGFPYVQVLKTADINSSEVEVLYLRNVSAEDAGEYTCLAGNS
IGLSYQSAWLTVLPEEDPTWTAAAPEARYTDIILYASGSLALAVLLLLAGLYRGQALHGR
HPRPPATVQKLSRFPLARQFSLESGSSGKSSSSLVRGVRLSSSGPALLAGLVSLDLPLDP
LWEFPRDRLVLGKPLGEGCFGQVVRAEAFGMDPARPDQASTVAVKMLKDNASDKDLADLV
SEMEVMKLIGRHKNIINLLGVCTQEGPLYVIVECAAKGNLREFLRARRPPGPDLSPDGPR
SSEGPLSFPVLVSCAYQVARGMQYLESRKCIHRDLAARNVLVTEDNVMKIADFGLARGVH
HIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDV

>gi568815593f:176989603_177197673|GENSCAN_predicted_CDS_4|2985_bp
atgatagaactcatgccttggccgggcgcggtggctcacgcctgtaatcccagcactttg
gaaggccaagtggagcacatgatccagaagaaccaatgtctcttcaccaacacccagtgt
aaggtttgctgcgccttgcttatttctgagtcccagaagctggcacattaccagagcaaa
aaacatgccaacaaagtgaagagatacctagcaatccatggaatggagacattaaagggg
gaaacgaagaagctagactcagatcagtggggaaccattgaagattttctggtggggcag
tggtatgatcagacctgtgttctttcttccaaccagaagagcagcagaagcaaagacaag
aaccagtgctgccccatctgtaacatgaccttttcctcccctgtcgtggcccagtcgcac
tacctggggaagacccacgcaaagaacttaaagctgaagcagcagtccactaaggtggaa
gctctgtcaaaacgccttacaaatcctttccttgtggcctccaccttagccttgcaccag
aatagagagatgatagacccagacaagttctgcagcctctgccatgcaactttcaacgac
cctgtcatggctcaacaacattatgtgggcaagaaacacagaaaacaggagaccaagctc
aaactaatggcacgctatgggcggctggcggaccctgctgtcactgactttccagctgga
aagggctacccctgcaaaacatgtaagatagtgctgaactccatagaacagtaccaagct
catgtcagcggcttcaaacacaagaaccacggaccacttgcccagtttgctgtggtgcta
gccttccccatcatccaccgggtgatttctgggtcccagggaaagaaagagagagctgat
gcaggtttctacagaaggcagttggtgggaagtccagcttgggtccctgagagctgtgag
aaggagatgcggctgctgctggccctgttgggggtcctgctgagtgtgcctgggcctcca
gtcttgtccctggaggcctctgaggaagtggagcttgagccctgcctggctcccagcctg
gagcagcaagagcaggagctgacagtagcccttgggcagcctgtgcgtctgtgctgtggg
cgggctgagcgtggtggccactggtacaaggagggcagtcgcctggcacctgctggccgt
gtacggggctggaggggccgcctagagattgccagcttcctacctgaggatgctggccgc
tacctctgcctggcacgaggctccatgatcgtcctgcagaatctcaccttgattacaggt
gactccttgacctccagcaacgatgatgaggaccccaagtcccatagggacccctcgaat
aggcacagttacccccagcaagcaccctactggacacacccccagcgcatggagaagaaa
ctgcatgcagtacctgcggggaacaccgtcaagttccgctgtccagctgcaggcaacccc
acgcccaccatccgctggcttaaggatggacaggcctttcatggggagaaccgcattgga
ggcattcggctgcgccatcagcactggagtctcgtgatggagagcgtggtgccctcggac
cgcggcacatacacctgcctggtagagaacgctgtgggcagcatccgctataactacctg
ctagatgtgctggagcggtccccgcaccggcccatcctgcaggccgggctcccggccaac
accacagccgtggtgggcagcgacgtggagctgctgtgcaaggtgtacagcgatgcccag
ccccacatccagtggctgaagcacatcgtcatcaacggcagcagcttcggagccgacggt
ttcccctatgtgcaagtcctaaagactgcagacatcaatagctcagaggtggaggtcctg
tacctgcggaacgtgtcagccgaggacgcaggcgagtacacctgcctcgcaggcaattcc
atcggcctctcctaccagtctgcctggctcacggtgctgccagaggaggaccccacatgg
accgcagcagcgcccgaggccaggtatacggacatcatcctgtacgcgtcgggctccctg
gccttggctgtgctcctgctgctggccgggctgtatcgagggcaggcgctccacggccgg
cacccccgcccgcccgccactgtgcagaagctctcccgcttccctctggcccgacagttc
tccctggagtcaggctcttccggcaagtcaagctcatccctggtacgaggcgtgcgtctc
tcctccagcggccccgccttgctcgccggcctcgtgagtctagatctacctctcgaccca
ctatgggagttcccccgggacaggctggtgcttgggaagcccctaggcgagggctgcttt
ggccaggtagtacgtgcagaggcctttggcatggaccctgcccggcctgaccaagccagc
actgtggccgtcaagatgctcaaagacaacgcctctgacaaggacctggccgacctggtc
tcggagatggaggtgatgaagctgatcggccgacacaagaacatcatcaacctgcttggt
gtctgcacccaggaagggcccctgtacgtgatcgtggagtgcgccgccaagggaaacctg
cgggagttcctgcgggcccggcgccccccaggccccgacctcagccccgacggtcctcgg
agcagtgaggggccgctctccttcccagtcctggtctcctgcgcctaccaggtggcccga
ggcatgcagtatctggagtcccggaagtgtatccaccgggacctggctgcccgcaatgtg
ctggtgactgaggacaatgtgatgaagattgctgactttgggctggcccgcggcgtccac
cacattgactactataagaaaaccagcaacggccgcctgcctgtgaagtggatggcgccc
gaggccttgtttgaccgggtgtacacacaccagagtgacgtgtga

>gi568815593f:176989603_177197673|GENSCAN_predicted_peptide_5|329_aa
MCVRAGLGAGTGRAAPRTADAAVLGTQADGPLVPPPPRAGRLLRSPVPRGVRASPLRAGH
LDPSGAAPGHGTARLAGTSPLAQPSAWGLTACILHRARSTESSTTASGFRSRPHAGRIPG
RTPPIGPFGQVAATGQSAAAGAVGRAKGSAAVEPQKRSSLLPASLGSGANAPVKTLGQQQ
QGEAEEEEEEEEEEEQEEEEEEKEEEEKEEEEEQEEKEEEEEEEEEEEEEEEEEEKEEEE
EQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEELFSENSSSTGMPGYGEPPRV
KISHSRIPKDHLEVGPGLSVAQRPPDDRG

>gi568815593f:176989603_177197673|GENSCAN_predicted_CDS_5|990_bp
atgtgcgtgcgcgccgggctgggggccgggacgggacgggccgcgcctcgcaccgcggac
gctgcagttctcggcacccaggcagatggccctctcgtgccaccgccgcccagagcgggc
cgcctgctccgcagcccggttccccggggagtgcgcgcctcgcccctgagggccgggcat
ctggaccccagcggagctgcgccgggacacgggaccgcccggctggccgggacaagcccg
ctggcgcagccctcggcctggggcctcacggcctgcatcctgcaccgggcccgcagcacc
gaatctagcacgaccgcgtcgggcttccgctcccggccacacgcgggccgcattcctggg
agaacgcctcctattggtccgttcggtcaggtggctgccacgggccaatcagcggcggct
ggtgccgtgggccgcgcgaagggctctgcggcggtggagcctcagaaaagatcatctttg
cttccagcttctctgggctcaggggccaatgctcccgtcaagacgctggggcagcagcag
cagggggaggctgaggaggaggaagaggaggaggaggaagaggagcaggaggaggaggag
gaagagaaggaggaggaagagaaggaggaggaagaggagcaggaggagaaggaggaagag
gaggaggaggaagaggaggaggaggaagaggaggaggaggaagagaaggaggaggaagag
gagcaggaggagaaggaggaagaggaggaggaggaagaggaggaggaggaagaggaggag
gaagaggaggaggaggaagaggaggaggaggaagaggaagaggaggaggaggacgaggag
ttgttcagcgagaacagctcctccaccgggatgccaggatacggggagcccccgagggtg
aagatctcccatagcaggatcccaaaagaccacctggaggtagggccagggctcagtgtg
gctcagcgccctcccgacgaccggggctag

>gi568815593f:176989603_177197673|GENSCAN_predicted_peptide_6|344_aa
MDQTCELPRRNCLLPFSNPVNLDAPEDKDSPFGNGQSNFSEPLNGCTMQLSTVSGTSQNA
YGQDSPSCYIPLRRLQDLASMINVEYLNGSADGSESFQDPEKSDSRAQTPIVCTSLSPGG
PTALAMKQEPSCNNSPELQVKVTKTIKNGFLHFENFTCVDDADVDSEMDPEQPVTEDESI
EEIFEETQTNATCNYETKSENGVKVAMGSEQDSTPESRHGAVKSPFLPLAPQTETQKNKQ
RNEVDGSNEKAALLPAPFSLGDTNITIEEQLNSINLSFQDDPDSSTSTLGNMLELPGTSS
SSTSQELPFLMRHPLIELFHFSNLLQMLNDRRMVDVELFDNFLX

>gi568815593f:176989603_177197673|GENSCAN_predicted_CDS_6|1032_bp
atggatcagacctgtgaactacccagaagaaattgtctgctgcccttttccaatccagtg
aatttagatgcccctgaagacaaggacagccctttcggtaatggtcaatccaatttttct
gagccacttaatgggtgtactatgcagttatcgactgtcagtggaacatcccaaaatgct
tatggacaagattctccatcttgttacattccactgcggagactacaggatttggcctcc
atgatcaatgtagagtatttaaatgggtctgctgatggatcagaatcctttcaagaccct
gaaaaaagtgattcaagagctcagacgccaattgtttgcacttccttgagtcctggtggt
cctacagcacttgctatgaaacaggaaccctcttgtaataactcccctgaactccaggta
aaagtaacaaagactatcaagaatggctttctgcactttgagaattttacttgtgtggac
gatgcagatgtagattctgaaatggacccagaacagccagtcacagaggatgagagtata
gaggagatctttgaggaaactcagaccaatgccacctgcaattatgagactaaatcagag
aatggtgtaaaagtggccatgggaagtgaacaagacagcacaccagagagtagacacggt
gcagtcaaatcgccattcttgccattagctcctcagactgaaacacagaaaaataagcaa
agaaatgaagtggacggcagcaatgaaaaagcagcccttctcccagcccccttttcacta
ggagacacaaacattacaatagaagagcaattaaactcaataaatttatcttttcaggat
gatccagattccagtaccagtacattaggaaacatgctagaattacctggaacttcatca
tcatctacttcacaggaattgccatttctgatgaggcacccacttattgagctttttcac
ttttccaatttgcttcaaatgctgaacgaccgtagaatggtcgacgttgagctcttcgac
aacttcttggnn