GENSCAN 1.0	Date run:  7-Nov-116	Time: 18:52:17

Sequence gi568815597f:111655925_111866896 : 210972 bp : 44.24% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  25764  25983  220  2  1   43    9   146 0.135   0.99
 1.02 Term +  27577  28007  431  2  2   19   41   188 0.141   2.66
 1.03 PlyA +  28094  28099    6                               1.05

 2.00 Prom +  29875  29914   40                              -2.26
 2.01 Init +  35437  35493   57  0  0   66  119    40 0.991   6.24
 2.02 Intr +  39417  39485   69  2  0  132   93    55 0.996   9.78
 2.03 Intr +  41517  41573   57  2  0  123   70    35 0.947   4.28
 2.04 Intr +  45091  45130   40  0  1  110  101    -6 0.407   0.70
 2.05 Intr +  47485  47552   68  2  2   34   95   100 0.403   3.92
 2.06 Intr +  48419  48562  144  1  0  133   76    85 0.993  12.28
 2.07 Term +  53225  53311   87  1  0   57   47    69 0.544  -2.64
 2.08 PlyA +  54318  54323    6                               1.05

 3.04 PlyA -  54557  54552    6                               1.05
 3.03 Term -  71880  71044  837  0  0  126   41   501 0.909  42.16
 3.02 Intr -  83504  83262  243  2  0   97   99    50 0.327   4.69
 3.01 Init -  83696  83610   87  2  0   94   17   110 0.342   3.16
 3.00 Prom -  87175  87136   40                              -5.46

 4.00 Prom +  88957  88996   40                              -5.86
 4.01 Init + 100001 100301  301  1  1  108   89   447 0.998  42.21
 4.02 Intr + 100722 100816   95  1  2  112  109    47 0.994   8.88
 4.03 Intr + 103476 103644  169  2  1   71   99     2 0.855  -0.88
 4.04 Intr + 104550 104664  115  1  1   73   69    68 0.790   2.91
 4.05 Intr + 104782 104924  143  1  2   82   75    18 0.557  -0.10
 4.06 Intr + 106982 107083  102  0  0  114   88    53 0.994   8.05
 4.07 Term + 109813 110975 1163  2  2   77   38   446 0.963  30.53
 4.08 PlyA + 111313 111318    6                               1.05

 5.08 PlyA - 112297 112292    6                               1.05
 5.07 Term - 120354 120153  202  2  1   66   41   172 0.720   7.16
 5.06 Intr - 121349 121102  248  2  2  131   94   182 0.997  19.36
 5.05 Intr - 122568 122512   57  0  0   69   70    56 0.663   0.98
 5.04 Intr - 124390 124301   90  1  0  113   74   110 0.999  12.29
 5.03 Intr - 124867 124766  102  1  0   64   90   178 0.992  15.97
 5.02 Intr - 131182 131020  163  0  1  130  121   169 0.814  24.38
 5.01 Init - 131842 131835    8  1  2   46   95     0 0.293  -3.19
 5.00 Prom - 135306 135267   40                              -0.66

 6.00 Prom + 143919 143958   40                              -2.96
 6.01 Init + 143992 144036   45  0  0   47   78    38 0.190  -1.89
 6.02 Intr + 149241 149312   72  2  0  121  116     0 0.632   5.70
 6.03 Intr + 152752 152957  206  0  2   85   36    94 0.345   1.90
 6.04 Intr + 157528 157712  185  1  2   92   80    28 0.163   1.83
 6.05 Intr + 174356 174474  119  0  2   97   91    28 0.618   4.18
 6.06 Intr + 175214 175234   21  1  0  114  116    -6 0.558   2.54
 6.07 Intr + 176982 177042   61  2  1   83   75    34 0.213  -0.09
 6.08 Intr + 184072 184171  100  2  1   65   -1   144 0.443   2.37
 6.09 Intr + 188515 188628  114  1  0   85   32    95 0.667   3.16
 6.10 Intr + 190856 190994  139  2  1   78   19    74 0.093  -0.03
 6.11 Intr + 200101 200246  146  0  2  120   75    43 0.205   5.28
 6.12 Intr + 200638 200827  190  1  1   91   75    35 0.087   2.09
 6.13 Intr + 201296 201452  157  1  1   71   74    15 0.041  -2.02
 6.14 Term + 202090 202205  116  2  2   30   54   108 0.082   0.33
 6.15 PlyA + 204396 204401    6                               1.05

 7.00 Prom + 207841 207880   40                              -4.26
 7.01 Init + 209086 209188  103  0  1   65   90    95 0.275   7.80

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:111655925_111866896|GENSCAN_predicted_peptide_1|216_aa
MWDYVKRPNLRLIGIPESDGENGTKLENAPGYYPELPQPSKTDQHSNSGNTENITKILLK
KSNPKTHNRQIHQVIQTTTREYKHLYANKLEKLEEMDKFLDTYTLPRLNHKEVNSLNRPI
TSSEIEAVNNSLPTKKSPGPDRFTAEFYQRYKEELVPFLLKLFQTTEEERLLPNSFYEAS
VILIPKPGRDTTKKENFRPISLMTIDAKILNKILAN

>gi568815597f:111655925_111866896|GENSCAN_predicted_CDS_1|651_bp
atgtgggactatgtgaaaagaccaaacctacgattgattggtatacctgaaagtgacggg
gagaatggaaccaagttggaaaatgctccaggatattatccagaacttccccaacctagc
aagacagaccaacattcaaattcaggaaatacagagaacatcactaagatactcctcaag
aagagcaaccctaaaacacataatcgtcagattcaccaagtaatacaaactaccaccaga
gaatataaacacctctatgcaaataaactagaaaagctagaagaaatggataaattcctg
gatacatataccctcccaagactaaaccacaaagaagtcaactccttgaatagaccaata
acaagttctgaaattgaggcagtaaataatagcctaccaaccaaaaaaagtccaggacca
gacagattcacagccgaattctaccagaggtacaaagaggagctggtaccattccttctg
aaactattccaaacaacagaagaagagcgactgctccctaactcattttatgaggccagt
gtcatcctgatacccaaacctggcagagacacaacaaaaaaggaaaatttcaggccaata
tccctgatgaccatcgatgcaaaaatcctcaataaaatactggcaaactga

>gi568815597f:111655925_111866896|GENSCAN_predicted_peptide_2|173_aa
MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAG
TIVLHTVTIIIPFKSQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQG
QNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTPVEKKKPKKKSCLLL

>gi568815597f:111655925_111866896|GENSCAN_predicted_CDS_2|522_bp
atgcgtgagtacaagctagtggtccttggttcaggaggcgttgggaagtctgctctgaca
gttcagtttgttcagggaatttttgttgaaaaatatgacccaacgatagaagattcctac
agaaagcaagttgaagtcgattgccaacagtgtatgctcgaaatcctggatactgcaggg
acaattgttctccacacagtaaccatcataattccatttaaatctcagtccacgtttaac
gacttacaggacctgagggaacagattttacgggttaaggacacggaagatgttccaatg
attttggttggcaataaatgtgacctggaagatgagcgagtagttggcaaagagcagggc
cagaatttagcaagacagtggtgtaactgtgcctttttagaatcttctgcaaagtcaaag
atcaatgttaatgagatattttatgacctggtcagacagataaataggaaaacaccagtg
gaaaagaagaagcctaaaaagaaatcatgtctgctgctctag

>gi568815597f:111655925_111866896|GENSCAN_predicted_peptide_3|388_aa
MPSAALAGTRCVLASPSGCARVLCKHCGRHRPRAASRWGSDSESRARSAGSAPRCERYGR
RGGEPARSAVSSGAGVSPGPSLFEPNPTNGRMTMESREMDCYLRRLKQELMSMKEVGDGL
QDQMNCMMGALQELKLLQVQTALEQLEISGGGPVPGSPEGPRTQCEHPCWEGGRGPARPT
VCSPSSQPSLGSSTKFPSHRSVCGRDLAPLPRTQPHQSCAQQGPERVEPDDWTSTLMSRG
RNRQPLVLGDNVFADLVGNWLDLPELEKGGEKGETGGAREPKGEKGQPQELGRRFALTAN
IFKKFLRSVRPDRDRLLKEKPGWVTPMVPESRTGRSQKVKKRSLSKGSGHFPFPGTGEHR
RGENPPTSCPKALEHSPSGFDINTAVWV

>gi568815597f:111655925_111866896|GENSCAN_predicted_CDS_3|1167_bp
atgccctccgccgcgctggccgggaccaggtgtgtcctcgccagccccagtggctgcgcc
cgggtcctgtgcaaacactgcggtaggcaccgaccgcgcgcggctagccgctggggaagc
gactctgagtcccgggctcggagcgcaggctcagctccgcgctgcgagcgctacgggcgc
aggggcggggagccggcccggagcgcagtttccagtggggccggggtttcacccgggccc
tctctgtttgaaccgaacccgacaaatgggcgcatgacgatggagagcagggaaatggac
tgctatctccgtcgcctcaaacaggagctgatgtccatgaaggaggtgggtgatggctta
caggatcagatgaactgcatgatgggtgcactgcaagaactgaagctcctccaggtgcag
acagcactggaacagctggagatctctggagggggtcctgtgccaggcagccctgaaggt
cccaggacccagtgcgagcacccttgttgggagggtggcagaggtcctgccaggcccaca
gtctgttccccctccagtcaaccttctcttggcagcagcaccaagtttccatcccatagg
agtgtctgtggaagggatttagcccccttgcccaggacacagccacatcaaagctgtgct
cagcaggggccagagcgagtggaaccggatgactggacctccacgttgatgtcccggggc
cggaatcgacagcctctggtgttaggggacaacgtttttgcagacctggtgggcaattgg
ctagacttgccagaactggagaagggtggggagaagggtgagactgggggggcacgtgaa
cccaaaggagagaaaggccagccccaggagctgggccgcaggttcgccctgacagcaaac
atctttaagaagttcttgcgtagtgtgcggcctgaccgtgaccggctgctgaaggagaag
ccaggctgggtgacacccatggtccctgagtcccgaaccggccgctcacagaaggtcaag
aagcggagcctttccaagggctctggacatttccccttcccaggcaccggggagcacagg
cgaggggagaatccccccacaagctgccccaaggccctggagcactcaccctcaggattt
gatattaacacagctgtttgggtctga

>gi568815597f:111655925_111866896|GENSCAN_predicted_peptide_4|695_aa
MAAAFEASGALAAVATAMPAEHVAVQVPAPEPTPGPVRILRTAQDLSSPRTRTGDVLLAE
PADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIA
LDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK
CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML
AVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGTLGLTVTYCCRGEEENMMMRIAQKC
NINLLPLPDPIPSGLMEECVDWDVEVKAAVHTYGIASVPNQPLKKQIQKIERTLQIQKAH
GDHMASSRNNSVSGLSVKSKNNTKQKLPVKSHSECGIIEKATSPKELGCDRQSEEQMKNS
VQTPVENSTNSQHQVKEALPVSLPQIPCLSSFKIHQPYTLTFAELVEDYEHYIKEGLEKP
VEIIRHYTGPGDQTVNPQNGFVRNKVIEQRVPVLASSSQSGDSESDSDSYSSRTSSQSKG
NKSYLEGSSDNQLKDSESTPVDDRISLEQPPNGSDTPNPEKYQESPGIQMKTRLKEGASQ
RAKQSRRNLPRRSSFRLQTEAQEDDWYDCHREIRLSFSDTYQDYEEYWRAYYRAWQEYYA
AASHSYYWNAQRHPSWMAAYHMNTIYLQEMMHSNQ

>gi568815597f:111655925_111866896|GENSCAN_predicted_CDS_4|2088_bp
atggcggcggcatttgaagcctcgggagccttagcagcagtggcgactgctatgccggct
gagcatgtggccgtgcaggtcccggccccagagccaacacccgggcctgtgaggatcctg
cggaccgctcaggatctcagcagcccgcggacccgcacgggggatgtgctgttggcggag
ccggccgacttcgagtcactgctgctttcgcggccggtgctggaggggctgcgggcggcc
ggcttcgagaggccctcgccggtgcagctcaaggccatcccgttggggcgctgcgggctc
gatttaattgttcaagctaaatctggcaccgggaaaacctgtgtgttctccaccatagct
ttggactctcttgttcttgaaaacttaagtacccagattttgatcttggctcctacaaga
gaaattgctgtacagatacattctgttattacagccattggaataaaaatggaaggctta
gagtgtcatgtctttattggagggaccccattatcacaagacaaaaccagacttaaaaag
tgtcatattgctgttggatctcctggcagaattaagcaactcatagaacttgactacttg
aacccaggcagtatacgcctctttattcttgatgaagcagataagcttttagaagaaggc
agcttccaggagcaaataaattggatttattcttccttgcctgccagtaaacagatgctg
gcagtatcagctacttatcccgaatttttggctaatgctttgacaaagtacatgagagat
cccacttttgtaagactgaattccagtgatccaagtctcataggtacattggggctgaca
gtgacctactgttgccggggagaggaagaaaatatgatgatgagaattgcccagaaatgt
aatatcaaccttctccctttaccagatcccattccttctggtctgatggaagaatgtgtg
gattgggatgtggaagttaaagctgctgtgcatacatatggtatagcaagtgtacctaac
caacccttaaaaaagcaaattcagaaaatagagagaacccttcaaattcagaaagctcat
ggtgaccacatggcttcctctagaaataattctgtatctggactatcagtcaaatcaaaa
aataataccaaacaaaagcttcctgtgaaaagccactcagaatgtggaatcatagaaaaa
gcaacgtcaccaaaagaactgggctgtgacaggcaatccgaagagcaaatgaagaattct
gttcagactcccgttgaaaactccaccaacagtcagcaccaggtcaaagaagctttacct
gtgtcactcccccagattccttgtctgtcttcctttaaaatccatcagccatacacgttg
acttttgctgaattggtagaggattatgaacattatattaaagaggggttagagaaacct
gtggaaatcatcaggcactacacaggccctggggatcagactgtgaatcctcaaaatggt
tttgtgagaaataaagttattgaacagagagtccctgtgttggcaagtagtagccaatct
ggagactctgagagtgacagtgattcttacagctcaagaacctcttcccagagcaaagga
aataagtcatacttggaaggctcttctgataatcagctgaaagactctgaatctacgcct
gtggatgatcgtatttctttggaacaaccaccaaatggaagtgacacccccaatccagag
aaatatcaagaatcacctggaatccagatgaagacaagacttaaagagggggctagccag
agagctaagcagagccggagaaacctacccaggcggtcttccttcagattgcagactgaa
gcccaggaagatgattggtatgactgtcatagggaaatacgtctgagtttttctgatacc
tatcaggattatgaggagtactggagagcttactacagggcatggcaagaatattatgct
gccgcttctcattcatattattggaatgctcagagacatccaagttggatggcagcttat
cacatgaataccatttatctacaagaaatgatgcatagtaaccagtga

>gi568815597f:111655925_111866896|GENSCAN_predicted_peptide_5|289_aa
MNRYGDMVPKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRRAQKKAR
LARIRVAKTGSSNAYLHSKRNGLLNEALELTGTPEEEHMGKTTSLIESQHHHLLHCLEKT
TGLSYLVDDPLLSVRTSTIKNHEFIDEQMFEQNCMESSMQNYPSTRSPSLSSHPGLTTTC
CSRRSKKTTHLPNSNLPATRLRSMQELSTIHIQGSEQPSLTTSRSSLNLKADDGLRPNCK
TSQITTAIISIPTPPALTPEGESRPPPASPGPNTNIPSIASNVVKVSAL

>gi568815597f:111655925_111866896|GENSCAN_predicted_CDS_5|870_bp
atgaatagatacggagacatggtgcctaagacgattgcagggaagatcttcggctccatc
tgctccttgagtggcgtcctggtcattgccctgccagtccctgtgattgtttccaacttt
agccggatttaccaccagaatcagagagctgataaacgcagggcacaaaagaaggcccgc
cttgccaggatccgtgtggccaaaacaggcagttcgaatgcatacctgcacagcaagcgc
aacgggctcctcaacgaggcgctggagctgacgggcaccccagaagaggagcacatgggc
aagaccacctcactcatcgagagccagcatcatcacctgctgcactgcctggaaaaaacc
actgggttgtcctatcttgtggatgatcccctgttatctgtacgaacctccaccatcaag
aaccacgagtttattgatgagcagatgtttgagcagaactgcatggagagttcaatgcag
aactacccatccacaagaagtccctcactgtccagccacccaggcctcactaccacctgc
tgctcccgtcgtagtaagaagaccacacacctgcccaattctaacctgccagctactcgc
ctgcgcagcatgcaagagctcagcacgatccacatccagggcagtgagcagccctccctc
acaaccagtcgctccagccttaatttgaaagcagacgacggactgagaccaaactgcaaa
acatcccagatcaccacagccatcatcagcatccccactcccccagcgctaaccccagag
ggggaaagtcggccaccccctgccagcccaggccccaacacgaacattccttccatagcc
agcaatgttgtcaaggtctccgccttgtaa

>gi568815597f:111655925_111866896|GENSCAN_predicted_peptide_6|556_aa
MKIGPPRLASRPVREGPFKMTQQTISLNGISTPTGGKKKSFSSQLILEILMHKVGEGKWL
EMDINRTNKIPSSKRRLPTLQKALNTCALQRLFKDLENQDVPCQRGLLSEPPDPLHIIAH
VEDDNIRPGHWSQQRLPSVMRGKQLKALAVLGSPSHSRAKGSVPHTPVPAFQIKACFFMQ
HKRLAQIWAQCGSSDLALIHDFVSWPIFQGKRKLMKLTTSKQTSYWVQEVIKVSGAVLQP
GKSKFKVPADVVSSEGLIVRDGRPCCILTCFLVAENLGICCHPTLSPAIIPAGPRIHGDH
SNNSCLPSFVKQGLSSSFDNGGKLSLREAIALGNEAALGSSGFRFERRPLTHSTALARTP
TGQTQPEARMEKDGEQTWTETLPDEYPRDCLRTLHLPCRGEKRPDPPLHMVDPEPLPDLG
SAPGSLLPAPPAKGDCWLALACPSIWQSLLMSTGSKPQVTALLGVKDHHRGVTDALGSTV
PERRCSPGRGVTARAEEDRDVCTILLLCRGHGAGFADPGQETDTQKSDVTYWRLSAAGST
SQRKAPSNMWLPKLVN

>gi568815597f:111655925_111866896|GENSCAN_predicted_CDS_6|1671_bp
atgaaaattgggcccccccgcctggccagccgccccgtccgggagggcccctttaaaatg
actcaacagactattagtctcaatggaatatcaaccccaacagggggaaaaaaaaagagc
ttctcatctcagctcattctggaaattctgatgcacaaagttggtgaggggaagtggcta
gagatggacatcaataggaccaacaaaatccccagctccaagaggagactgccaactctg
caaaaagcattaaatacttgtgctctgcagcgcctgtttaaggacttggagaaccaagat
gtgccttgccaaagaggcctcttgtcagagcctcctgaccctcttcacatcatagcacat
gtggaagatgataatattcgcccaggacactggagtcaacagaggctgccatctgtaatg
agaggcaagcagctgaaggctctagctgtcttaggctcgcctagccacagccgggccaag
gggtccgtgccccacacacctgtaccagccttccagataaaggcctgtttcttcatgcag
cataaaaggcttgctcagatctgggcccagtgcggttcctcagaccttgcactcattcat
gactttgtatcttggcctatattccagggaaagagaaaattgatgaagctcaccaccagc
aaacagacatcatactgggtccaggaggtaattaaagtttcaggggcagttctgcagcct
ggaaagtccaagtttaaggtgccagcagatgtggtgtccagcgagggcctgatcgtcaga
gatggccgtccttgctgcatcctcacatgctttctggtcgctgagaaccttggcatctgc
tgtcatcctactctgagccctgccatcatcccagctggccccaggatccacggggaccac
tctaacaacagctgtctgcccagttttgtgaagcaggggttgtcatcttcatttgacaat
ggggggaaactgagtcttagagaagctattgccctaggtaatgaagcagccctgggcagt
tctggattcaggtttgaacgcaggcctctaactcacagcacggctcttgccaggaccccc
actggccaaacccagccagaagccaggatggagaaggatggcgagcagacctggacggag
accctccctgatgaatacccaagggactgcctccgcactctgcacctgccttgcagggga
gagaagaggccagacccccccttgcacatggtggatcctgagcctctgcccgacttgggg
tcagcgccaggaagcctgctgccagccccacctgccaaaggtgactgctggctagcactg
gcctgtcccagcatctggcagagcttacttatgagcactggttccaagccccaagtgact
gcattgctaggtgtcaaggatcatcatcgcggtgttacagatgctctgggctccacagtc
cctgagagaaggtgcagccctgggcgtggggtcacagcgcgtgctgaggaggacagagat
gtctgcaccattctgcttctgtgcagagggcacggggctggttttgctgacccaggacag
gaaactgatactcagaagagtgacgtgacttactggaggttgtcggctgccggttctaca
tctcagcgaaaggcaccttcaaacatgtggctgcccaagttagtgaactga

>gi568815597f:111655925_111866896|GENSCAN_predicted_peptide_7|35_aa
MFEEQPDIRQPNLHLGLKVSLAMVLNAKAPLSGRX

>gi568815597f:111655925_111866896|GENSCAN_predicted_CDS_7|105_bp
atgttcgaggaacagccagacattcggcaacccaatcttcatcttggtctgaaagtgtcc
ttggccatggtgctgaatgctaaggccccactatcaggtagagnn