GENSCAN 1.0	Date run:  5-Nov-116	Time: 20:36:06

Sequence gi568815591f:129089152_129312448 : 223297 bp : 43.83% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2508   2643  136  2  1   57   64    90 0.528   3.64
 1.02 Intr +  14063  14219  157  0  1   53   44    57 0.070  -3.13
 1.03 Intr +  18812  18944  133  2  1  125   46    51 0.146   5.25
 1.04 Intr +  29080  29208  129  0  0   65   99    44 0.363   4.09
 1.05 Term +  37166  38509 1344  1  0   56   33  2285 0.809 211.30
 1.06 PlyA +  39282  39287    6                               1.05

 2.00 Prom +  41979  42018   40                              -5.06
 2.01 Init +  55830  55931  102  2  0  112   92   183 0.999  19.52
 2.02 Intr +  58436  58498   63  1  0  100   49    40 0.504   0.21
 2.03 Intr +  59233  59335  103  0  1  111  101    24 0.984   5.75
 2.04 Intr +  60550  60749  200  2  2   28   47   138 0.578   2.77
 2.05 Intr +  72528  72585   58  2  1  131   99    24 0.731   6.26
 2.06 Intr +  73243  73370  128  2  2   67  113   159 0.990  16.70
 2.07 Intr +  73682  73756   75  1  0   93   87   135 0.953  13.61
 2.08 Intr +  75323  75520  198  1  0  103   95   207 0.954  22.45
 2.09 Intr +  77250  77402  153  2  0   62  103    12 0.554   0.37
 2.10 Intr +  77627  77755  129  1  0   75   99    52 0.979   5.89
 2.11 Intr +  78248  78409  162  1  0   66   93   170 0.976  15.47
 2.12 Term +  78622  78723  102  0  0   91   54   126 0.807   7.78
 2.13 PlyA +  79659  79664    6                               1.05

 3.00 Prom +  80922  80961   40                              -6.16
 3.01 Init + 100001 100331  331  1  1   87  114   530 0.999  50.97
 3.02 Intr + 114233 114438  206  0  2   84  113   226 0.277  23.62
 3.03 Intr + 116052 116261  210  2  0   67   53   473 0.999  40.81
 3.04 Intr + 116459 116631  173  1  2  100   63   282 0.999  25.64
 3.05 Intr + 116999 117218  220  2  1   74   80   288 0.999  24.90
 3.06 Intr + 117313 117436  124  0  1  116  105   234 0.997  28.06
 3.07 Intr + 119608 119700   93  2  0   87   92   157 0.997  15.94
 3.08 Intr + 120138 120246  109  1  1  133   68   229 0.999  24.74
 3.09 Intr + 121212 121397  186  0  0   72   80   333 0.974  29.70
 3.10 Intr + 121814 121962  149  2  2  116   80   247 0.999  26.58
 3.11 Intr + 122485 122619  135  2  0   97   80    91 0.999   9.74
 3.12 Term + 122873 123300  428  0  2   90   52   358 0.986  27.87
 3.13 PlyA + 124374 124379    6                               1.05

 4.00 Prom + 132900 132939   40                              -7.76
 4.01 Init + 135836 136288  453  1  0  100   79   573 0.693  52.76
 4.02 Intr + 161675 161699   25  1  1   92   95    -3 0.012  -1.60
 4.03 Intr + 171299 171400  102  0  0   97   52    93 0.454   6.75
 4.04 Intr + 194039 194130   92  0  2   84   66    58 0.007   2.91
 4.05 Term + 199067 199114   48  1  0  109   47    36 0.523  -1.10
 4.06 PlyA + 200941 200946    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 193981 194130  150  0  0   88   66    90 0.942   7.04
S.002 Sngl - 212335 212057  279  1  0   38   38   163 0.811   1.73


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:129089152_129312448|GENSCAN_predicted_peptide_1|632_aa
LSVAISPSCGRKRDSAWLGEQTPGADCNKDRKLFLDPRQVQGGKKAKEGESEPLFHGIRF
PGSGFDLCANFQGGLSIMMLSTSSDALGGGLTEMVDLWTPVILESGPILISGPHPNLTNY
IFKDTVSKPGYILRFRMDTNFELFEAIYCYIQSSYSGIEQGSPAPEPWSHNNGLWPVRNR
ATQQERRRLARLSPSAPRLPSDQARSAARPRPPRRRPGPRSQPRARVGAERSRPAHYGPR
LEAPPPPARGARMLARRKPMLPALTINPTIAEGPSPTSEGASEANLVDLQKKLEELELDE
QQKRLEAFLTQKAKVGELKDDDFERTSELDAGNGGVVTKVQHRPSGLIMARKLIHLEIKP
AIRNQIIREHQVLHECNSPYIVGFYGAFYCDREISICMEHMDGGSLDQGLKEAKRIPEDI
LGKVSIAVLRGLAYLREKHQIMHRNVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG
TRSYMAPERLQGTHYSVQSVIWSMDLSLVELAIERYPIPPPDAKELEAIFGQPVVDREEG
EPHSISSWPGSPGRPNSGYGMDSLPAMAIFELLDYIVKEPPPKLPNGVFTPDFQEFVNKC
LIKNPTERADLKMLTNHAFIKRSEVKEADFAC

>gi568815591f:129089152_129312448|GENSCAN_predicted_CDS_1|1899_bp
ctcagtgtggccatatcgccctcttgcggtagaaagcgggactccgcctggctaggggaa
cagacgccaggggctgactgtaacaaagaccggaagctcttcttggatccaaggcaggtg
caaggagggaaaaaagctaaggaaggagagagtgagcctctctttcatggcattcggttt
cctggctctggatttgacctatgcgcaaacttccagggtggcttgagcataatgatgcta
tcaaccagctcagatgccctaggaggtggccttacagaaatggtagacttgtggacacct
gtcatattggagtcaggacccatcctgatctcaggacctcatcctaacttaactaattat
atcttcaaagacactgtttccaaaccgggctacattctgaggttccgcatggacacgaat
tttgagctatttgaagctatatattgttacatccagtcatcctacagtggtatagaacag
gggtccccagcccctgagccatggtcgcataacaacggtctatggcctgttaggaaccgg
gccacacagcaggagcggcggcggctcgctcgcctcagccccagcgcccctcggctaccc
tcggaccaggcccgcagcgccgcccgccctcggccgccccgacgccggcctgggccgcgg
tcgcagccccgggctcgcgtaggcgccgaacgctcccggcccgcccactacgggcccagg
ctagaggcgccgccgccaccggcccgcggagcccggatgctggcccggaggaagccgatg
ctgccggcgctcaccatcaaccctaccatcgccgagggcccgtccccaaccagcgagggc
gcctccgaggcaaacctggtggacctgcagaagaagctggaggagctggaacttgacgag
cagcagaagcggctggaagcctttctcacccagaaagccaaggtcggcgaactcaaagac
gatgacttcgaaaggacctcagagctggacgcgggcaacggcggggtggtcaccaaagtc
cagcacagaccctcgggcctcatcatggccaggaagctgatccaccttgagatcaagccg
gccatccggaaccagatcatccgcgagcaccaggtcctgcacgagtgcaactcaccgtac
atcgtgggcttctacggggccttctactgtgacagggagatcagcatctgcatggagcac
atggatggcggctccctggaccaggggctgaaagaggccaagaggattcccgaggacatc
ctggggaaagtcagcattgcggttctccggggcttggcgtacctccgagagaagcaccag
atcatgcaccgaaatgtgaagccctccaacatcctcgtgaactctagaggggagatcaag
ctgtgtgacttcggggtgagcggccagctcatcgactccatggccaactccttcgtgggc
acgcgctcctacatggctccggagcggttgcagggcacacattactcggtgcagtcggtc
atctggagcatggacctgtccctggtggagctggccatcgaaaggtaccccatccccccg
cccgacgccaaggagctggaggccatctttggccagcccgtggtcgacagggaagaagga
gagcctcacagcatctcctcttggccagggtcccccgggcgccccaacagcggttacggg
atggacagcctgcccgccatggccatcttcgaactgctggactatattgtgaaagagccg
cctcctaagctgcccaacggtgtgttcacccccgacttccaggagtttgtcaataaatgc
ctcatcaaaaacccaacggagcgggcggacctaaagatgctcacaaaccacgccttcatc
aagcggtccgaggtgaaagaagcggattttgcctgctag

>gi568815591f:129089152_129312448|GENSCAN_predicted_peptide_2|490_aa
MARRPRAPAASGEEFSFVSPLVKYLLFFFNMLFWTSTILIKFCSSAQEAPMDEMMTSGSR
GWARPYSLLDPQCPAVFGINWVLTECLLDEQSQPWPEEDAKGLAPDIVEEGALWTPPLQG
DSVPQSRGRALTASLPWTAATSDTHNSSAMESTERPVISMVMVAVGVYARLMKHAEAALA
CLAVDPAILLIVVGVLMFLLTFCGCIGSLRENICLLQTFSLCLTAVFLLQLAAGILGFVF
SDKARGKVSEIINNAIVHYRDDLDLQNLIDFGQKKVWVSQWSGGLWVKVNVIPRDASPSM
PVGLFITCQEKFFSTDTVIISANTFDHFHLPAKPETSLKKIIAEYVKQNICTTVIPTSTV
FSCCGGISYKDWSQNMYFNCSEDNPSRERCSVPYSCCLPTPDQAVINTMCGQGMQAFDYL
EASKVIYTNGCIDKLVNWIHSNLFLLGGVALGLAIPQLVGILLSQILVNQIKDQIKLQLY
NQQHRADPWY

>gi568815591f:129089152_129312448|GENSCAN_predicted_CDS_2|1473_bp
atggcgcggagaccccgggcgccggccgcctccggggaggagttctccttcgtcagcccg
ctggtgaaatacctgctcttcttcttcaacatgctcttctggacttccaccatcctaatc
aaattctgctcttctgcccaggaagcacctatggatgagatgatgacttcgggctctcga
gggtgggcacggccctattcacttctggatccccagtgcccagctgtgtttggcataaat
tgggtgcttactgaatgtttattggatgaacaaagccagccgtggcctgaggaagatgcc
aaaggcttggccccggacattgttgaggaaggagccctgtggactcctccactccagggg
gacagtgtcccccaatccagagggagagcgctgacagccagcctcccatggacagccgcc
acctcagacacccataacagcagcgccatggagagcacagaaagaccagtgatttccatg
gtgatggtggctgtgggtgtctacgctcggctaatgaagcatgcagaagcagccctagcc
tgcctggcagtggaccctgccatcctgctgatcgtggtgggtgtcctcatgttcctgctc
accttctgtggctgcattgggtccctccgcgagaacatctgcctcctgcagacgttctcc
ctctgcctcaccgctgtgttcctgctgcagctggccgctgggatcctgggcttcgtcttc
tcagacaaggctcgagggaaagtgagtgagatcatcaacaatgccattgtgcactaccga
gatgacttggatctgcagaacctcattgattttggccagaaaaaggtatgggtcagccag
tggtctgggggactgtgggtaaaagtgaatgtcatcccaagagatgcctcaccctctatg
cctgtggggctcttcattacctgccaggagaagtttttcagcactgatactgtaattatt
tcagccaatacttttgatcacttccatttgcctgcaaagccagaaacttctctcaagaag
attatagctgagtatgtaaaacaaaatatatgtacaactgtaataccaacaagcacagtg
tttagctgctgtggagggatttcctacaaggactggtctcagaacatgtatttcaactgc
tcagaagacaaccccagtcgagagcgctgctctgtgccttactcctgttgcttgcctact
cctgaccaggcagtgatcaacactatgtgtggccaaggtatgcaggcctttgactacttg
gaagctagcaaagtcatctacaccaatggctgtattgacaagttggtcaactggatacac
agcaacctattcttacttggtggtgtggctctaggcctggccatcccccagctggtggga
attctgctgtcccagatcctagtgaatcagatcaaagatcagatcaagctacagctctac
aaccagcagcaccgggctgacccatggtactga

>gi568815591f:129089152_129312448|GENSCAN_predicted_peptide_3|787_aa
MAAARPARGPELPLLGLLLLLLLGDPGRGAASSGNATGPGPRSAGGSARRSAAVTGPPPP
LSHCGRAAPCEPLRYNVCLGSVLPYGATSTLLAGDSDSQEEAHGKLVLWSGLRNAPRCWA
VIQPLLCAVYMPKCENDRVELPSRTLCQATRGPCAIVERERGWPDFLRCTPDRFPEGCTN
EVQNIKFNSSGQCEVPLVRTDNPKSWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAAFGAV
TGLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCRADGT
MRLGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTTYQPLSGKTSYF
HLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLI
RGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEW
ERSFRDYVLCQANVTIGLPTKQPIPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKA
TLLIWRRTWCRLTGQSDDEPKRIKKSKMIAKAFSKRHELLQNPGQELSFSMHTVSHDGPV
AGLAFDLNEPSADVSSAWAQHVTKMVARRGAILPQDISVTPVATPVPPEEQANLWLVEAE
ISPELQKRLGRKKKRRKRKKEVCPLAPPPELHPPAPAPSTIPRLPQLPRQKCLVAAGAWG
AGDSCRQGAWTLVSNPFCPEPSPPQDPFLPSAPAPVAWAHGRRQGLGPIHSRTNLMDTEL
MDADSDF

>gi568815591f:129089152_129312448|GENSCAN_predicted_CDS_3|2364_bp
atggccgctgcccgcccagcgcgggggccggagctcccgctcctggggctgctgctgctg
ctgctgctgggggacccgggccggggggcggcctcgagcgggaacgcgaccgggcctggg
cctcggagcgcgggcgggagcgcgaggaggagcgcggcggtgactggccctccgccgccg
ctgagccactgcggccgggctgccccctgcgagccgctgcgctacaacgtgtgcctgggc
tcggtgctgccctacggggccacctccacactgctggccggagactcggactcccaggag
gaagcgcacggcaagctcgtgctctggtcgggcctccggaatgccccccgctgctgggca
gtgatccagcccctgctgtgtgccgtatacatgcccaagtgtgagaatgaccgggtggag
ctgcccagccgtaccctctgccaggccacccgaggcccctgtgccatcgtggagagggag
cggggctggcctgacttcctgcgctgcactcctgaccgcttccctgaaggctgcacgaat
gaggtgcagaacatcaagttcaacagttcaggccagtgcgaagtgcccttggttcggaca
gacaaccccaagagctggtacgaggacgtggagggctgcggcatccagtgccagaacccg
ctcttcacagaggctgagcaccaggacatgcacagctacatcgcggccttcggggccgtc
acgggcctctgcacgctcttcaccctggccacattcgtggctgactggcggaactcgaat
cgctaccctgctgttattctcttctacgtcaatgcgtgcttctttgtgggcagcattggc
tggctggcccagttcatggatggtgcccgccgagagatcgtctgccgtgcagatggcacc
atgaggcttggggagcccacctccaatgagactctgtcctgcgtcatcatctttgtcatc
gtgtactacgccctgatggctggtgtggtttggtttgtggtcctcacctatgcctggcac
acttccttcaaagccctgggcaccacctaccagcctctctcgggcaagacctcctacttc
cacctgctcacctggtcactcccctttgtcctcactgtggcaatccttgctgtggcgcag
gtggatggggactctgtgagtgggatttgttttgtgggctacaagaactaccgataccgt
gcgggcttcgtgctggccccaatcggcctggtgctcatcgtgggaggctacttcctcatc
cgaggagtcatgactctgttctccatcaagagcaaccaccccgggctgctgagtgagaag
gctgccagcaagatcaacgagaccatgctgcgcctgggcatttttggcttcctggccttt
ggctttgtgctcattaccttcagctgccacttctacgacttcttcaaccaggctgagtgg
gagcgcagcttccgggactatgtgctatgtcaggccaatgtgaccatcgggctgcccacc
aagcagcccatccctgactgtgagatcaagaatcgcccgagccttctggtggagaagatc
aacctgtttgccatgtttggaactggcatcgccatgagcacctgggtctggaccaaggcc
acgctgctcatctggaggcgtacctggtgcaggttgactgggcagagtgacgatgagcca
aagcggatcaagaagagcaagatgattgccaaggccttctctaagcggcacgagctcctg
cagaacccaggccaggagctgtccttcagcatgcacactgtgtcccacgacgggcccgtg
gcgggcttggcctttgacctcaatgagccctcagctgatgtctcctctgcctgggcccag
catgtcaccaagatggtggctcggagaggagccatactgccccaggatatttctgtcacc
cctgtggcaactccagtgcccccagaggaacaagccaacctgtggctggttgaggcagag
atctccccagagctgcagaagcgcctgggccggaagaagaagaggaggaagaggaagaag
gaggtgtgcccgctggcgccgccccctgagcttcacccccctgcccctgcccccagtacc
attcctcgactgcctcagctgccccggcagaaatgcctggtggctgcaggtgcctgggga
gctggggactcttgccgacagggagcgtggaccctggtctccaacccattctgcccagag
cccagtccccctcaggatccatttctgcccagtgcaccggcccccgtggcatgggctcat
ggccgccgacagggcctggggcctattcactcccgcaccaacctgatggacacagaactc
atggatgcagactcggacttctga

>gi568815591f:129089152_129312448|GENSCAN_predicted_peptide_4|239_aa
MGEGRGREVGGGADQEQELESEPVVAAEAVMSVQVVSAAAAAKVPEVELKDLSPSEAESQ
LGLSTAAVGAMAPPAGGGDPEAPAPAAERPPVPGPGSGPAAALSPAAGKVPQASAMKRSD
PHHQHQRHRDGGEALVSPDGTVTEAPRTVKKNGATLMIPYSLFSMEIIPASLNHSSYDVV
GQAITTILAISITYSQLNLFNEDSPGLYLGSSFIKLHLGNILKAFFVVEIKSFVLAEFP

>gi568815591f:129089152_129312448|GENSCAN_predicted_CDS_4|720_bp
atgggggagggaagaggaagggaggtgggaggcggggccgaccaagagcaggagctggag
tctgagccggtggttgcagcggaggcggtgatgtcggtgcaggttgtgtcagccgcggct
gccgccaaggtgcctgaggtggagctgaaggacctgagcccctccgaggcggagtcgcaa
ctaggactgagcacggccgccgtgggcgccatggcccccccggcgggcggtggagaccct
gaggctccagctcccgccgcggagcggcccccggtccccggcccgggctcggggcccgcc
gccgctctcagccccgccgccgggaaggtgcctcaggcgtcggccatgaagcggagcgac
ccacatcaccagcaccagcggcaccgcgacggcggcgaggccctggtcagccccgacggc
accgtcaccgaggcgccgcgcacagtcaagaagaatggagcaacccttatgataccctat
agtctcttctccatggaaatcattcctgcttctcttaatcattcttcatatgatgtagtc
ggccaggccattactaccatcctggctatcagcatcacttactctcagctcaatctcttc
aacgaagatagccctgggctctacttgggttcctccttcattaaactgcaccttggaaat
attctcaaggcattttttgttgtagaaatcaagtcatttgtgttggcagaatttccctga