GENSCAN 1.0	Date run:  8-Nov-116	Time: 12:23:05

Sequence gi568815578f:31414552_31669216 : 254665 bp : 48.45% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5118   5272  155  0  2   45   74   120 0.565   6.02
 1.02 Term +  16677  16702   26  1  2  122   49     4 0.125  -1.71
 1.03 PlyA +  17321  17326    6                               1.05

 2.06 PlyA -  17377  17372    6                               1.05
 2.05 Term -  25624  25566   59  2  2   93   43    73 0.817   1.15
 2.04 Intr -  25923  25819  105  1  0   85   76    18 0.490   0.49
 2.03 Intr -  26444  26336  109  2  1   79   81    45 0.973   2.76
 2.02 Intr -  29272  29039  234  1  0   69   97    77 0.821   4.59
 2.01 Init -  34647  34426  222  0  0   63   98   108 0.759   7.86
 2.00 Prom -  42541  42502   40                              -5.46

 3.00 Prom +  49159  49198   40                              -3.86
 3.01 Init +  61895  62234  340  1  1   73   75   183 0.635  12.94
 3.02 Intr +  63277  63359   83  2  2   83   60   122 0.658   8.26
 3.03 Intr +  67736  67937  202  1  1   95  105   254 0.997  26.66
 3.04 Term +  69608  69879  272  0  2   69   48   355 0.999  25.25
 3.05 PlyA +  70182  70187    6                               1.05

 4.00 Prom +  73608  73647   40                              -3.26
 4.01 Init +  82598  82891  294  1  0   48   86   145 0.392   7.49
 4.02 Intr +  90844  90946  103  0  1   61   32   108 0.394   2.25
 4.03 Intr +  93340  93392   53  2  2  128   45    16 0.407  -0.07
 4.04 Intr +  99908 100183  276  1  0   63   97   426 0.801  38.71
 4.05 Intr + 112933 113031   99  0  0  115  106   137 0.920  18.51
 4.06 Intr + 123628 123710   83  0  2   95   71   106 0.899   8.04
 4.07 Intr + 127877 128032  156  2  0   98   70    43 0.809   2.63
 4.08 Intr + 130396 130484   89  1  2  134   86    65 0.993  10.51
 4.09 Intr + 132888 133141  254  1  2   68  103   111 0.502   7.75
 4.10 Intr + 134414 134563  150  1  0   81  113   108 0.128  12.96
 4.11 Intr + 134656 134781  126  0  0   63   92   207 0.999  19.48
 4.12 Intr + 135513 135570   58  2  1  146  101    98 0.999  15.36
 4.13 Intr + 138988 139005   18  2  0  102  111     1 0.566   0.38
 4.14 Intr + 140195 140278   84  0  0  104   99    91 0.977  11.59
 4.15 Intr + 145060 145096   37  2  1  113  109    92 0.998  11.12
 4.16 Intr + 147083 147185  103  2  1   88   80   200 0.991  19.38
 4.17 Intr + 151659 151744   86  2  2   76  110    73 0.857   6.92
 4.18 Term + 153527 153677  151  2  1  101   38    64 0.565   0.08
 4.19 PlyA + 157628 157633    6                               1.05

 5.02 PlyA - 158976 158971    6                               1.05
 5.01 Sngl - 164325 163900  426  0  0   81   37   296 0.959  18.10
 5.00 Prom - 168483 168444   40                              -6.76

 6.03 PlyA - 171745 171740    6                               1.05
 6.02 Term - 180384 180194  191  1  2   61   41    98 0.185   0.01
 6.01 Init - 190381 190123  259  1  1   30   94   252 0.954  17.30
 6.00 Prom - 190457 190418   40                             -10.94

 7.00 Prom + 190699 190738   40                              -5.76
 7.01 Init + 190837 191262  426  0  0   63   78   822 0.971  73.00
 7.02 Term + 192033 192113   81  2  0   93   39    75 0.788   0.79
 7.03 PlyA + 193323 193328    6                               1.05

 8.00 Prom + 195289 195328   40                              -4.26
 8.01 Init + 196130 196151   22  1  1   76  105    21 0.124   2.69
 8.02 Intr + 218658 218885  228  1  0   78   58    69 0.386   0.74
 8.03 Intr + 225382 225546  165  2  0  109   95   267 0.926  29.43
 8.04 Intr + 228853 228984  132  2  0   47  113   163 0.998  15.32
 8.05 Term + 230217 230353  137  1  2   81   38   257 0.998  18.18
 8.06 PlyA + 232050 232055    6                               1.05

 9.02 PlyA - 233148 233143    6                               1.05
 9.01 Term - 251535 251398  138  0  0  150   47   254 0.999  25.46

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  51112  50955  158  2  2  103   37    69 0.848   1.40
S.002 Intr - 205236 205128  109  2  1   71  103    40 0.903   4.09


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:31414552_31669216|GENSCAN_predicted_peptide_1|60_aa
XEFAQDLMVFESVWQFPLVPSLSPAAVEDVPCFLFIFCPDYKFPEASPAMQNYVYGATRF

>gi568815578f:31414552_31669216|GENSCAN_predicted_CDS_1|183_bp
nntgagttcgcacaagatctgatggtttttgaaagtgtttggcagttccccctggtgccc
tctctctcacctgctgccgtggaagatgtgccttgcttcctcttcatcttctgccctgat
tataagtttcctgaggcctccccagccatgcagaactatgtttatggtgccactagattc
tga

>gi568815578f:31414552_31669216|GENSCAN_predicted_peptide_2|242_aa
MTHNQEKNKSTNTEMTMMMKLADKDDKTAMINMLQVVKKVEEAMSMMRRNKDVKNIHGRA
RWVKPMIPALWEAKEVEGKYSAHNFWGSWKFKSSSRSSSSGPESPARTHASFCQPDGGPT
NKLGTKAFRVSPASSLLVDLNTQEVEIINVRKATPTCSLELGRKRRDGAAERAALDVVVV
IYQLAPAAAPNCLNPVTSRRRHKHRLRKVREDGRVLKNKYKATGSSFRFLRDLRTNHSES
FF

>gi568815578f:31414552_31669216|GENSCAN_predicted_CDS_2|729_bp
atgacccataaccaggagaaaaacaaatcaaccaacacagaaatgacaatgatgatgaaa
ctagcagacaaggatgataaaacagctatgataaatatgctccaagtagtaaaaaaggtg
gaggaagccatgagcatgatgagaagaaataaagatgtaaaaaatattcatggccgggca
cgatgggtcaagcctatgatcccagcactttgggaggccaaggaagtagaggggaaatac
tctgcccataatttctggggaagctggaagtttaaatccagctcccgcagcagcagcagt
gggcctgagagccctgctagaacccatgcctcattctgccagcctgatggtggacccacc
aacaagctagggacaaaggcctttcgtgtgtctcctgctagcagtctactggttgacctg
aacactcaggaagtagagataattaatgtgagaaaggccacccccacatgctccctggag
ctgggcaggaagaggagggatggagccgctgagagagcagctctggatgttgtagttgtc
atctatcagctggcacctgctgctgctccaaactgcctgaacccagtgaccagcaggagg
cgccacaaacaccggctccggaaggtcagggaagacggcagagttttgaagaataaatac
aaagcaacagggtcatccttccgcttcctcagagatctgagaaccaaccactcagaatcc
ttcttctga

>gi568815578f:31414552_31669216|GENSCAN_predicted_peptide_3|298_aa
MTLNTEQEAKTPLHRRASTPLPLSPRGHQPGRLSTVPSTQSQHPRLGQSASLNPPTQKPS
PAPDDWSSESSDSEGSWEALYRVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERT
LTVDGEDTTLVVVDTWEAEKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLR
RTHQADHVPIILVGNKADLARCREVSVEEGRACAVVFDCKFIETSATLQHNVAELFEGVV
RQLRLRRRDSAAKEPPAPRRPASLAQRARRFLARLTARSARRRALKARSKSCHNLAVL

>gi568815578f:31414552_31669216|GENSCAN_predicted_CDS_3|897_bp
atgacactcaacaccgagcaggaagcaaagacccctctgcaccggcgagccagcacccca
ctgcccctgtccccacggggccaccagcctggccgcctgagcacagtgccttccactcaa
tcccagcatccccggctgggccaatcagcctccctcaaccctcccacccagaaaccttca
cctgccccagatgattggtcttctgaatccagcgactctgaaggctcctgggaggctctc
taccgtgtggtgctacttggagatcctggagtggggaagaccagcttggccagcctcttt
gcagggaagcaagagagggacctccatgaacagctgggagaagatgtatatgagaggacc
ctcacggtggatggagaagacaccacactggtggtcgtggacacctgggaggccgagaaa
ctggataaaagctggagccaggagtcatgcctgcaggggggcagtgcctatgtcatcgta
tactccatcgcagaccgaggcagctttgagagtgcctctgagctccgcatccagctgcgg
cgcacacatcaggcagaccatgtgcccatcatcctcgtgggcaacaaggcagacttggcc
cgctgccgagaagtctctgtggaagagggccgcgcctgcgctgtggtgttcgactgtaaa
ttcatcgagacatccgccacgctgcagcacaatgtggccgagctcttcgagggcgtggtg
cgccaactgcgcttgcgccgccgggacagtgcggccaaggaacccccagcaccccgacgg
ccggccagcctagcccagcgcgctcgtcgcttcctggcacgcctgacagcccgcagcgca
cgccgccgggcactcaaggcccgctccaagtcctgccacaatctggccgtgctctga

>gi568815578f:31414552_31669216|GENSCAN_predicted_peptide_4|739_aa
MNLGINHSWNGDAGKLDSLGMRTADSGRVRWPGRRIDPILRDLRQGWLRSESHQPHQMHP
DLYDISAVPLPGKSPLATHNAHNSTIMDTTKALVQYTKQAWFSVKENEDKADKNRKEMQR
EDPGSMDILASRDYNLNKVSRALASFLDHEGNVAFPAEPVSPPASLLQQPELESDPERTL
AMDSALSDPHNGSAEAGGPTNSTTRPPSTPEGIALAYGSLLLMALLPIFFGALRSVRCAR
GKNASDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSH
TIRGEGHQDVACQWEAMTFTFDMSHQGPGRISACYKSLHSESFSKHFSRCLAGTSPFMNK
FFPASFPNRQYQLLFTQGSGENKEGDSTGALPIPFVSLLSPASPWIMFKKFDEKESVSNC
IQLKTSVIKGIKSQLVEQFPGIEPWLNQIMPKKDPVKIVRCHEHTEILTGLTGGRGSPAS
GSGLTWPLCSEIINYEFDTKDLVCLGLSSIVGVWYLLRKHWIANNLFGLAFSLNGVELLH
LNNVSTGCILLGGLFIYDVFWVFGTNVMVTVAKSFEAPIKCDKTKAVVFPQDLLEKGLEA
NNFAMLGLGDVVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHA
QPALLYLVPACIGFPVLVALAKGEVTEMFSYESSAEILPHTPRLTHFPTVSGSPASLADS
MQQKLAGPRRRRPQNPSAM

>gi568815578f:31414552_31669216|GENSCAN_predicted_CDS_4|2220_bp
atgaatctgggcatcaaccactcctggaatggagatgctggcaaactcgactctctgggg
atgcgcacagctgactcagggagggtgcggtggccaggaagaaggatcgatcctattctc
agagatcttcgccagggctggttaagatctgagagccatcagccacatcaaatgcatcct
gatctctatgacatcagtgcggtccctctgcctggtaaatctcctcttgctactcacaat
gcccataattccaccattatggatacaaccaaggctcttgttcagtatacaaagcaagcc
tggttttctgtgaaagagaatgaagacaaagcagataaaaacagaaaggagatgcagaga
gaggatcctggcagcatggacatcctggcttccagggactacaatttgaacaaggtgtcc
agagctttagcatccttcttagatcatgaggggaacgtggctttccctgcagagccggtg
tctccgcctgcgtccctgctgcagcaaccggagctggagtcggatcccgaacgcaccctc
gccatggactcggccctcagcgatccgcataacggcagtgccgaggcaggcggccccacc
aacagcactacgcggccgccttccacgcccgagggcatcgcgctggcctacggcagcctc
ctgctcatggcgctgctgcccatcttcttcggcgccctgcgctccgtacgctgcgcccgc
ggcaagaatgcttcagacatgcctgaaacaatcaccagccgggatgccgcccgcttcccc
atcatcgccagctgcacactcttggggctctacctctttttcaaaatattctcccaggag
tacatcaacctcctgctgtccatgtatttcttcgtgctgggaatcctggccctgtcccac
accatcaggggagaagggcaccaggatgtggcttgtcagtgggaagcaatgacctttacg
tttgacatgagccatcaagggccaggaagaatctctgcctgctacaaaagtctgcattca
gagtcattcagcaagcattttagcagatgtctagcaggcaccagccccttcatgaataag
ttttttccagccagctttccaaatcgacagtaccagctgctcttcacacagggttctggg
gaaaacaaggaaggggactccaccggagccttgccaattccgtttgtttccctgttgtcg
cccgcttcaccctggatcatgttcaagaagtttgatgaaaaggaaagtgtgtccaactgc
atccagttgaaaacgtcagttattaagggcattaagagccaactggtagagcaatttcca
ggtattgaaccatggcttaatcaaatcatgcctaagaaagatcctgtcaaaatagtccga
tgccacgaacatacagaaatccttaccgggctgacaggtgggaggggtagccctgcctca
gggagtggacttacctggcctctctgctcagagatcatcaattatgaatttgacaccaag
gacctggtgtgcctgggcctgagcagcatcgttggcgtctggtacctgctgaggaagcac
tggattgccaacaacctttttggcctggccttctcccttaatggagtagagctcctgcac
ctcaacaatgtcagcactggctgcatcctgctgggcggactcttcatctacgatgtcttc
tgggtatttggcaccaatgtgatggtgacagtggccaagtccttcgaggcaccaataaaa
tgtgacaaaactaaggcagtggtgtttccccaggatctgctggagaaaggcctcgaagca
aacaactttgccatgctgggacttggagatgtcgtcattccagggatcttcattgccttg
ctgctgcgctttgacatcagcttgaagaagaatacccacacctacttctacaccagcttt
gcagcctacatcttcggcctgggccttaccatcttcatcatgcacatcttcaagcatgct
cagcctgccctcctatacctggtccccgcctgcatcggttttcctgtcctggtggcgctg
gccaagggagaagtgacagagatgttcagctacgagtcctcggcggaaatcctgcctcat
accccgaggctcacccacttccccacagtctcgggctccccagccagcctggccgactcc
atgcagcagaagctagctggccctcgccgccggcgcccgcagaatcccagcgccatgtaa

>gi568815578f:31414552_31669216|GENSCAN_predicted_peptide_5|141_aa
MGLAGPALGAAGRPAAPGSEGLSTRASSCRGCTGSPSSAGPPALRWISCRALAASPWDTA
GDLQPAMPPRPMGSCAAQASPTSAAPSSMAPGPIDPPRAEECGRHTAWDWQAAPPAAPVR
DPQGEASRAPESSGDLENLYV

>gi568815578f:31414552_31669216|GENSCAN_predicted_CDS_5|426_bp
atgggcttggcgggccccgcacttggagcggctggccggcccgccgccccaggcagtgag
gggcttagcacccgggccagcagctgcagagggtgcaccgggtccccaagcagtgctggc
ccaccggcgctgcgctggatttcttgccgggccttagctgcctccccgtgggacacggct
ggggacctgcagcccgccatgcccccccgccccatgggctcctgtgcagcccaagcctcc
cctacgagcgccgccccctcctccatggcgcccggtcccatcgaccccccaagggctgag
gagtgcggtcggcacacggcctgggattggcaggcagctccacctgcagcccctgtgcgg
gatccacagggtgaagccagccgggctcctgagtctagtggggacttggagaacctttat
gtctag

>gi568815578f:31414552_31669216|GENSCAN_predicted_peptide_6|149_aa
MREIEARTEKRLALDSPESLGFRTLLEDASRTLIYKYQDRNLKRALLYICSPGLSQFLNN
VAVRVPETRRAYPDPSRVGAINSGKSKQYTNAHTHTPNVAFICTTDTTDKPNSHTPIDTT
CQMHNAQQYTIIYNQHTDLRAHYRNTKSA

>gi568815578f:31414552_31669216|GENSCAN_predicted_CDS_6|450_bp
atgagagaaattgaggcccgaacggagaagcggctggctctggatagcccagagagcctg
ggtttccggaccctcttggaagatgcttctcggaccctgatctacaaatatcaggaccga
aatttaaagcgggcgctcctttacatctgctcccctgggctttctcaattcctaaataat
gttgctgttcgtgttcctgagacccggagggcctacccagatccctcccgggtgggagca
attaattcgggaaagtctaagcaatatacaaatgcacacacccacacgcccaacgtggca
tttatatgtacgactgacacaacagacaaacccaacagccacacaccaatagacacaacc
tgccaaatgcacaacgcacaacagtacaccataatatacaaccaacacactgacctccgc
gcacactaccgaaacaccaaatctgcataa

>gi568815578f:31414552_31669216|GENSCAN_predicted_peptide_7|168_aa
MKVASGSTATAAAGPSCALKAGKTASGAGEVVRCLSEQSVAISRCAGGAGARLPALLDEQ
QVNVLLYDMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGTPGG
RGLPVRAPLSTLNGEISALTAELVLGGELEGYIWIVALTGLNECFRCL

>gi568815578f:31414552_31669216|GENSCAN_predicted_CDS_7|507_bp
atgaaagtcgccagtggcagcaccgccaccgccgccgcgggccccagctgcgcgctgaag
gccggcaagacagcgagcggtgcgggcgaggtggtgcgctgtctgtctgagcagagcgtg
gccatctcgcgctgcgccgggggcgccggggcgcgcctgcctgccctgctggacgagcag
caggtaaacgtgctgctctacgacatgaacggctgttactcacgcctcaaggagctggtg
cccaccctgccccagaaccgcaaggtgagcaaggtggagattctccagcacgtcatcgac
tacatcagggaccttcagttggagctgaactcggaatccgaagttggaacccccgggggc
cgagggctgccggtccgggctccgctcagcaccctcaacggcgagatcagcgccctgacg
gccgagctggttctgggaggagaattggagggctacatctggattgttgctcttaccggc
ctgaatgagtgtttccggtgtctttaa

>gi568815578f:31414552_31669216|GENSCAN_predicted_peptide_8|227_aa
MAAGKKGGLSLSQSSQHVGPVTTSGLNAVSGVPSTLGPPAVPGEDPYSSALGPRVACLKG
QSVSSQVQDLERRLRSCPAGYIHPRGGGKMSPYTNCYAQRYYPMPEEPFCTELNAEEQAL
KEKEKGSWTQLTHAEKVALYRLQFNETFAEMNRRSNEWKTVMGCVFFFIGFAALVIWWQR
VYVFPPKPITLTDERKAQQLQRMLDMKVNPVQGLASRWDYEKKQWKK

>gi568815578f:31414552_31669216|GENSCAN_predicted_CDS_8|684_bp
atggctgccggaaagaaaggaggtctcagcctatcccagagctctcagcatgtcgggcct
gtcacgacaagtggcctgaatgccgtgtccggagtcccttccacccttggaccccccgcg
gttccaggagaagacccttattcctcggctctgggaccccgagtggcctgccttaaggga
cagtccgtctcttcccaggttcaggaccttgaaaggaggctccgcagttgtcctgcaggc
tatattcacccccgtggtggggggaagatgtccccctacaccaactgctatgcccagcgc
tactaccccatgccagaagagcccttctgcacagaactcaacgctgaggagcaggccctg
aaggagaaggagaagggaagctggacccagctgacccacgccgaaaaggtggccttgtac
cggctccagttcaatgagacctttgcggagatgaaccgtcgctccaatgagtggaagaca
gtgatgggttgtgtcttcttcttcattggattcgcagctctggtgatttggtggcagcgg
gtctacgtatttcctccaaagccgatcaccttgacggacgagcggaaagcccagcagctg
cagcgcatgctggacatgaaggtgaatcctgtgcagggcctggcctcccgctgggactat
gagaagaagcagtggaagaagtga

>gi568815578f:31414552_31669216|GENSCAN_predicted_peptide_9|45_aa
DTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK

>gi568815578f:31414552_31669216|GENSCAN_predicted_CDS_9|138_bp
gatacttttgtggaactctatgggaacaatgcagcagccgagagccgaaagggccaggaa
cgcttcaaccgctggttcctgacgggcatgactgtggccggcgtggttctgctgggctca
ctcttcagtcggaaatga