GENSCAN 1.0	Date run:  7-Nov-116	Time: 19:52:25

Sequence gi568815578f:37084179_37336709 : 252531 bp : 46.02% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.23 Intr -  11061  10923  139  2  1   98   27    79 0.513   3.27
 1.22 Intr -  11847  11581  267  2  0   24   75   353 0.132  24.25
 1.21 Intr -  18657  18522  136  1  1   67   28   112 0.167   2.73
 1.20 Intr -  24486  24421   66  1  0   91  127    38 0.970   6.88
 1.19 Intr -  28268  28142  127  2  1   88   47    64 0.792   2.55
 1.18 Intr -  29967  29812  156  0  0   95   94   140 0.999  15.51
 1.17 Intr -  31159  30995  165  1  0   38   58   132 0.469   5.36
 1.16 Intr -  36440  36326  115  1  1   92   94    30 0.730   4.45
 1.15 Intr -  39621  39431  191  0  2  104   29   156 0.476   9.68
 1.14 Intr -  44989  44854  136  0  1   58   61    82 0.874   3.07
 1.13 Intr -  53792  53632  161  2  2  111   92    12 0.539   2.69
 1.12 Intr -  57136  56984  153  1  0   62   92    50 0.842   3.07
 1.11 Intr -  59663  59539  125  0  2   84   90    96 0.996   9.70
 1.10 Intr -  63731  63596  136  2  1   84   56    36 0.931   0.14
 1.09 Intr -  70989  70885  105  0  0   98  105    83 0.910  11.41
 1.08 Intr -  73777  73682   96  1  0   81   92    15 0.709   1.41
 1.07 Intr -  74858  74714  145  1  1   52   78    83 0.956   3.98
 1.06 Intr -  75998  75919   80  2  2  136   64    78 0.978   8.55
 1.05 Intr -  77488  77451   38  2  2   83  100    29 0.698   1.58
 1.04 Intr -  83362  83279   84  2  0   50   70    77 0.568   1.89
 1.03 Intr -  87879  87745  135  1  0   28   89   124 0.843   7.04
 1.02 Intr -  89938  89817  122  0  2  112   98    88 0.994  12.34
 1.01 Init -  90108  90092   17  0  2   53   88   -26 0.076  -6.22
 1.00 Prom -  93649  93610   40                              -5.66

 2.00 Prom +  93779  93818   40                              -8.16
 2.01 Init +  94060  94073   14  0  2   72   66    12 0.086  -4.19
 2.02 Intr +  95074  95191  118  1  1   73   76   139 0.121  11.67
 2.03 Intr +  95297  95387   91  1  1   44   -5    94 0.085  -4.73
 2.04 Intr + 100002 100195  194  1  2   47  116   216 0.869  19.51
 2.05 Intr + 114219 114314   96  2  0   53  105    71 0.957   5.51
 2.06 Intr + 114872 115047  176  1  2   99   69   124 0.987  10.34
 2.07 Intr + 119707 119782   76  1  1   90   48    76 0.996   3.32
 2.08 Intr + 120589 120723  135  0  0   79   67   135 0.942  11.26
 2.09 Intr + 123095 123271  177  1  0   53   94   261 0.885  23.32
 2.10 Intr + 125869 125987  119  0  2   80  110    44 0.937   5.06
 2.11 Intr + 129582 129687  106  0  1   77   92   131 0.989  12.62
 2.12 Intr + 139700 139791   92  1  2   98   94    97 0.995  10.09
 2.13 Intr + 141510 141624  115  0  1   81   71   145 0.986  12.55
 2.14 Intr + 144372 144566  195  2  0   39   68   201 0.914  12.81
 2.15 Intr + 145795 145881   87  0  0   98   76    75 0.954   7.47
 2.16 Intr + 148118 148213   96  1  0   72  105    85 0.935   8.81
 2.17 Intr + 149842 149917   76  0  1   67  119    60 0.999   6.09
 2.18 Intr + 152402 152531  130  0  1   81   94   184 0.914  18.05
 2.19 Term + 155435 155516   82  2  1  117   38    13 0.278  -3.63
 2.20 PlyA + 157419 157424    6                               1.05

 3.12 PlyA - 158690 158685    6                               1.05
 3.11 Term - 158831 158802   30  2  0  103   39    37 0.264  -1.85
 3.10 Intr - 159553 159415  139  0  1   97   19    96 0.227   4.07
 3.09 Intr - 170151 170032  120  2  0   54   80    95 0.635   4.91
 3.08 Intr - 172320 172216  105  2  0  106   86   218 0.990  22.73
 3.07 Intr - 172491 172436   56  0  2   73   84   -27 0.421  -6.82
 3.06 Intr - 172730 172629  102  2  0  129  115     8 0.513   7.97
 3.05 Intr - 177494 177446   49  1  1   13  105    60 0.205  -1.12
 3.04 Intr - 177677 177565  113  2  2   18   94   125 0.479   5.28
 3.03 Intr - 192063 191980   84  0  0    7  111    66 0.086   0.82
 3.02 Intr - 195935 195913   23  0  2   46  102    36 0.030  -1.94
 3.01 Init - 202492 202339  154  1  1  101   45   113 0.437   8.44
 3.00 Prom - 207605 207566   40                              -4.26

 4.00 Prom + 209314 209353   40                              -3.26
 4.01 Init + 217086 217235  150  2  0   92  101   233 0.996  25.04
 4.02 Intr + 229658 229751   94  1  1   19   37   134 0.019   0.94
 4.03 Intr + 232327 232492  166  2  1   77   58    45 0.047  -0.58
 4.04 Intr + 244039 244175  137  1  2   85   94    38 0.360   4.31
 4.05 Intr + 249631 249711   81  2  0   72   96    45 0.792   3.31
 4.06 Term + 249829 249971  143  2  2   52   47   117 0.863   2.09
 4.07 PlyA + 251055 251060    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:37084179_37336709|GENSCAN_predicted_peptide_1|965_aa
MKKIRRICSQEEVVIPCAYDSDSESVDLELSNLEIIKKGSSSIELTDLDIPDIPGLHCEP
LSHSPRHLTQQDPLSEAIVEKLIQSIQKVFNVPDSSRNCLGNLGYKDKEDKIPIYAAKQG
KRNPLEAAETQKVLVQEERPHSLSSSMRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTI
KSIITLPSVRTLTQIQEIMPNGTCNTECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKH
LVPWLQSVKDHERERATASMAQVLKCLSKHLNLKLPLRFQRLGHLVALMALLCGDPQEKV
AEEAAEGIHSLLHITLRLKYITHDKKDQQNLKRALTKCREFLELHSSAAKCFYNCPFRIA
QVFEGFLDSNELCQFIMTTFDTLKTLKHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVI
CAQLSIISQPRVRQQIINTVSLFISRPKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELP
STTWILWRLLRKLQKCHNEPAQEKMAYVAVAATDALYEVFLGNRLRAATFRLFPQLLMTL
LIQIHHSIGLTMSDVDIPSGLYTEQEVPSEVTPLCALLERNQLLAQKVMYLLVPLLNRGN
DKHKLTSAGFFVEREDIKSLLPYIVDSLRETDEKIVLSAIQILLQLVRTMDFTTLAAMMR
TLFSLFGDVRSDVHRFSVTLFGAAIKSVKNPDKKSIENQVLDSLVPLLLYSQDENDAVAE
ESRQVLTICAQFLKWKLPQEVYSKDPWHIKPTEAGTICRFFVCLLSKYMDHNELRRMGTD
WIEDDLRDLLCDPEPSLCIIASQTLLLVQMARAEPKPKQRVNWLQKLMGRFSRALAQVVV
GSAPGREKEVGGRGAQPAGPEGMFEDKPHAEGAAVVAAAGEALQALCQELNLDEGSAAEA
LDDFTAIRGNYSLEVSGSRVELPVAVQQFDQSQCAHEADLSPTFPPPSEHRPDALHQCLA
LNKTN

>gi568815578f:37084179_37336709|GENSCAN_predicted_CDS_1|2895_bp
atgaaaaaaataagaaggatctgtagtcaggaagaagtagtgatcccctgtgcctatgac
agtgattcagaaagtgtggatttggagctgagcaacttagagattattaaaaaaggctca
agtagcattgaactgacagacttggacatccctgacatccctggactccattgtgagccc
ctgtcacatagccccagacacctgacccaacaggacccgctcagtgaggccattgttgag
aaactgatccagtccatccagaaggttttcaatgtgcctgacagttccaggaactgtctt
gggaatttgggctacaaagacaaagaagacaaaatccctatttatgcagccaagcaaggt
aagagaaatcctctagaagcagctgaaacacaaaaggtactggtacaagaggaacgcccg
cattctctgtccagttccatgcgccaggaggtctttgtcaccatcgctgatctcagttac
caagatgtccatttgctgttgggctctgaagatcgagctgagttgttcagtcttaccatc
aagagtataatcactctgccctctgtaaggacccttacccagatacaggaaatcatgccc
aatgggacctgcaacacagagtgtctttacaggcagacgtttcaggcattctctgagatg
ctccagagtttggtggtaaaagacccacatttggaaaatcttgacaccattattaagcac
ttggtcccctggttacagtcagtcaaagaccatgagcgggaacgggccacggccagcatg
gctcaagttctgaagtgcctatccaaacatctcaacttgaagcttccactgcgattccaa
agacttggacacctagtggctctgatggcactgctctgtggggacccacaggaaaaggtg
gctgaggaggctgcagagggcattcactccctgctgcatatcaccctgaggctgaagtat
atcactcatgacaagaaagatcagcaaaacttgaaaagagcattgacaaaatgtcgagaa
ttcctggagctccacagctctgccgctaaatgcttctacaactgtcccttcagaattgcc
caggtctttgaaggttttcttgattcaaatgagctctgccagtttataatgactacattt
gataccctgaaaaccctgaaacatccctgcatccagcgatcagcaggagaattactgcta
actttggcaaaaaatacagagtcccaatttgagaaggtgccagaaattatgggagttatc
tgtgcccagttatccataatcagccagcctagagtccgccaacaaatcataaataccgtg
agtttatttatatccagacccaagtacacagatatagtgctcagcttccttctgtgtcat
ccagtgccgtataacaggcacctggctgaggtgtggagaatgctgtcggtggagcttccc
agcacgacctggattctgtggaggctcctgaggaagctgcagaaatgccataatgagcct
gcacaggagaagatggcatatgtggctgtggctgcaacagatgccctttatgaggtgttt
ttgggaaacaggcttcgagcagctacgttccgactctttcctcagcttctcatgacactg
cttatccagattcatcacagcatcggcctcaccatgtctgatgtcgacatcccaagtggc
ctgtacacagaacaggaagtgccttcagaggtcacccctttgtgcgcattgctggaaaga
aatcagctccttgcacagaaggtcatgtacttattagtccctcttcttaaccgagggaat
gataaacataaactcacatctgcaggcttttttgtggagagagaagacatcaagagcctg
ttgccatacattgtagacagcttgcgtgaaaccgatgagaagatcgttctgtcagccatc
cagatactcctgcaacttgttagaacaatggatttcactaccctggctgccatgatgagg
accctgttctccttatttggtgatgtgagatctgatgttcatcgtttctccgtgactctc
tttggagccgccataaagtctgtaaaaaacccagataagaagagtatagagaaccaagtc
ctggacagcttggtcccactacttctgtattctcaggatgaaaatgatgcagtagctgag
gagagcaggcaagtcctaactatatgtgcccagttcctgaagtggaagctgccccaagaa
gtgtactccaaagatccctggcacatcaaacctactgaagcaggaacaatctgcagattc
tttgtatgccttttatcgaagtacatggatcacaatgagctcaggaggatgggtactgac
tggatagaggacgatctgagagacctgctgtgtgaccctgagccctcgctgtgcatcatc
gcttcccagactctgttactagtccagatggcgagggccgaaccaaaacctaagcagaga
gtgaactggttgcagaagctcatgggcagattttcgcgcgctttggcgcaggtggttgtg
ggtagcgcgcctgggagggagaaagaagtcgggggccgtggcgcgcagcccgcggggcct
gaagggatgttcgaggacaagccccacgctgagggggcggcggtggtcgccgcagccggg
gaggcgctacaggccctgtgccaggagctgaacctggacgaggggagcgcggccgaagcc
ctggacgactttactgccatccgaggcaactacagcctagaggtgagcggcagcagggtg
gagctgccggtcgctgtgcagcagtttgatcaaagccaatgtgcacacgaagctgatctc
agccctacgtttcctcctccgtcagagcatcgtcctgatgctttgcatcagtgtctggct
ctgaataaaacaaat

>gi568815578f:37084179_37336709|GENSCAN_predicted_peptide_2|724_aa
MSRLQACRESLASPVAGSWSHFPERKSARGSDSGGTCSEEWRRRGHGHKLWLGRSRIEGP
KEGCELVGVPATWRGSSTVFLLALTIIASTWALTPTHYLTKHDVERLKASLDRPFTNLES
AFYSIVGLSSLGAQVPDAKKACTYIRSNLDPSNVDSLFYAAQASQALSGCEISISNETKD
LLLAAVSEDSSVTQIYHAVAALSGFGLPLASQEALSALTARLSKEETVLATVQALQTASH
LSQQADLRSIVEEIEDLVARLDELGGVYLQFEEGLETTALFVAATYKLMDHVGTEPSIKE
DQVIQLMNAIFSKKNFESLSEAFSVASAAAVLSHNRYHVPVVVVPEGSASDTHEQAILRL
QVTNVLSQPLTQATVKLEHAKSVASRATVLQKTSFTPVGDVFELNFMNVKFSSGYYDFLV
EVEGDNRYIANTVELRVKISTEVGITNVDLSTVDKDQSIAPKTTRVTYPAKAKGTFIADS
HQNFALFFQLVDVNTGAELTPHQTFVRLHNQKTGQEVVFVAEPDNKNVYKFELDTSERKI
EFDSASGTYTLYLIIGDATLKNPILWNVADVVIKFPEEEAPSTVLSQNLFTPKQEIQHLF
REPEKRPPTVVSNTFTALILSPLLLLFALWIRIGANVSNFTFAPSTIIFHLGHAAMLGLM
YVYWTQLNMFQTLKYLAILGSVTFLAGNRMLAQQAVKRFNGVVIYLQKNVPFLVYNSVNP
EKPL

>gi568815578f:37084179_37336709|GENSCAN_predicted_CDS_2|2175_bp
atgtcgaggctgcaagcctgccgcgagtccctggcgtcccctgtggcgggctcttggagc
cactttcccgagcggaagtcagcccgcggctcggactccggcgggacctgctcggaggaa
tggcgccgccgggggcatgggcacaagctctggctggggcgctctcggatcgagggtccg
aaggagggctgcgagctggtgggagtgcccgcgacctggcggggttcaagcactgtcttc
ctgttggccctgacaatcatagccagcacctgggctctgacgcccactcactacctcacc
aagcatgacgtggagagactaaaagcctcgctggatcgccctttcacaaatttggaatct
gccttctactccatcgtgggactcagcagccttggtgctcaggtgccagatgcaaagaaa
gcatgtacctacatcagatctaaccttgatcccagcaatgtggattccctcttctacgct
gcccaggccagccaggccctctcaggatgtgagatctctatttcaaatgagaccaaagat
ctgcttctggcagctgtcagtgaggactcatctgttacccagatctaccatgcagttgca
gctctaagtggctttggccttcccttggcatcccaagaagcactcagtgcccttactgct
cgtctcagcaaggaggagactgtgctggcaacagtccaggctctgcagacagcatcccac
ctgtcccagcaggctgacctgaggagcatcgtggaggagattgaggaccttgttgctcgc
ctggatgaactcgggggcgtgtatctccagtttgaagaaggactggaaacaacagcgtta
tttgtggctgccacctacaagctcatggatcatgtggggactgagccatccattaaggag
gatcaggtcatccagctgatgaacgcgatcttcagcaagaagaactttgagtccctctcc
gaagccttcagcgtggcctctgcagctgctgtgctctcgcataatcgctaccacgtgcca
gttgtggttgtgcctgagggctctgcttccgacactcatgaacaggctatcttgcggttg
caagtcaccaatgttctgtctcagcctctgactcaggccactgttaaactagaacatgct
aaatctgttgcttccagagccactgtcctccagaagacatccttcacccctgtaggggat
gtttttgaactaaatttcatgaacgtcaaattttccagtggttattatgacttccttgtc
gaagttgaaggtgacaaccggtatattgcaaataccgtagagctcagagtcaagatctcc
actgaagttggcatcacaaatgttgatctttccaccgtggataaggatcagagcattgca
cccaaaactacccgggtgacatacccagccaaagccaagggcacattcatcgcagacagc
caccagaacttcgccttgttcttccagctggtagatgtgaacactggtgctgaactcact
cctcaccagacatttgtccgactccataaccagaagactggccaggaagtggtgtttgtt
gccgagccagacaacaagaacgtgtacaagtttgaactggatacctctgaaagaaagatt
gaatttgactctgcctctggcacctacactctctacttaatcattggagatgccactttg
aagaacccaatcctctggaatgtggctgatgtggtcatcaagttccctgaggaagaagct
ccctcgactgtcttgtcccagaaccttttcactccaaaacaggaaattcagcacctgttc
cgcgagcctgagaagaggccccccaccgtggtgtccaatacattcactgccctgatcctc
tcgccgttgcttctgctcttcgctctgtggatccggattggtgccaatgtctccaacttc
acttttgctcctagcacgattatatttcacctgggacatgctgctatgctgggactcatg
tatgtctactggactcagctcaacatgttccagaccttgaagtacctggccatcctgggc
agtgtgacgtttctggctggcaatcggatgctggcccagcaggcagtcaagaggtttaat
ggagttgtaatttatctgcagaaaaatgtaccctttttagtgtacaattctgtgaatcct
gaaaaacctctgtag

>gi568815578f:37084179_37336709|GENSCAN_predicted_peptide_3|324_aa
MDTDAHIERTSCEDEGRYRDDASTAKEHHRLPAGHQKLVKRHGTGSSQPSEGEHNVGGKV
FTESENSTLKGNDEVLWSNTLTLQTAQENEEINDGNARRLPEQTPSPGPLDLSSASEQRD
ICRIRNTESKRPTAILFAHGLVPPRVKDATLGVLLCDPHPQQQLPLLPTSPFDPQRRQTQ
LHRGHSEGSESLLGMRRYADAIFTNSYRKVLGQLSARKLLQDIMSRQQGESNQERGARAR
LGRQVDSMWAEQKQMELESILVALLQKHSHWLSFVPSDQDTQQPLYFHPQALLPLLHTTV
HQPRTQSVFQARTGLDPIQNGIEF

>gi568815578f:37084179_37336709|GENSCAN_predicted_CDS_3|975_bp
atggacacagatgcacacatagagagaacgtcatgtgaagatgaaggcagatatcgggac
gatgcctctacagccaaggaacaccacagattgccagcaggccaccagaagctagtcaag
aggcatgggacaggctcctcacagccctcagaaggagagcacaacgtgggcggtaaggta
ttcactgaatcagagaactcgactcttaaaggaaatgatgaggtcttatggtctaatacc
ctcactttacagacagctcaggaaaatgaagagataaatgatgggaacgccaggcggctg
ccagagcaaacacccagcccagggcccctggatttgagcagtgcctcggagcagagggat
atctgccgcatcagaaacactgagtccaagaggcccaccgccatcctctttgcccatgga
ctggtgccaccccgggtgaaggatgccactctgggtgttcttctttgtgatcctcaccct
cagcaacagctcccactgctccccacctccccctttgaccctcagaggaggcagacacag
cttcacagaggtcactcagaggggtctgagtctctcttggggatgcggcggtatgcagat
gccatcttcaccaacagctaccggaaggtgctgggccagctgtccgcccgcaagctgctc
caggacatcatgagcaggcagcagggagagagcaaccaagagcgaggagcaagggcacgg
cttggtcgtcaggtagacagcatgtgggcagaacaaaagcaaatggaattggagagcatc
ctggtggccctgctgcagaagcacagccactggctgtcctttgttcccagtgaccaggac
acccagcagcctttgtacttccaccctcaggccctactacccctgctccacaccactgtc
caccagccccgcacccagtctgtcttccaggcccgcacaggtctggatcccattcagaac
ggcatagagttctag

>gi568815578f:37084179_37336709|GENSCAN_predicted_peptide_4|256_aa
MASDLDFSPPEVPEPTFLENLLRYGLFLGAIFQLICVLAIIVPIPKSHEAGQTMGAVCRV
AKETGIPVDEGDQRKLWGLTQCSGSEEAVTPYDRRDLDSRNSPQAPAGQSTTSSSFCFCD
GLESRGLKHTVSIDCIRDPESLLLCSHLVETPNLKCGTLLLKPEKDPGLWPLAKAQAVQF
SSAQAQCKGASLPHYPLLPYPGNVCGRRKGAKCTTDVTEHPQQVPPEGPAQSGCGKAKCM
TSRLEDFGPQEPWAVD

>gi568815578f:37084179_37336709|GENSCAN_predicted_CDS_4|771_bp
atggcctctgacctagacttctcacctccggaggtgcccgagcccactttcctggagaac
ctgctacggtacggactcttcctgggagccatcttccagctcatctgtgtgctggccatc
atcgtacccattcccaagtcccacgaggcgggccaaaccatgggagcagtttgccgggtg
gccaaggaaacaggtattcctgttgatgaaggtgaccagcggaagctctggggcctgact
cagtgctcagggtctgaggaggctgtgacgccctatgaccgcagagatctagacagtcgt
aacagtccccaggctccagctgggcaatccaccacttcctcttccttctgcttctgtgac
ggtttagagtcaagggggctgaaacacactgtgagcatagactgtattagggatcctgag
tctttgctcctatgtagtcacttggtagaaacgccgaacctgaaatgtggcactttgctt
ctcaagccagagaaggatccaggcttatggcccttagcaaaagcccaagcggttcagttc
agctcagcccaggcccagtgcaaaggagcctcccttcctcattacccgcttctgccctac
cccgggaacgtgtgtggacgtagaaagggtgcaaaatgcacaacggatgtcacagagcat
ccccagcaggtgcccccagagggaccagcccagagcgggtgcggaaaggccaagtgcatg
accagccgccttgaggactttggcccccaggaaccttgggctgtggactag