GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:50:55

Sequence gi568815597r:23458963_23659426 : 200464 bp : 49.29% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5964   6037   74  2  2   71   82    79 0.851   6.14
 1.02 Term +   9247   9298   52  1  1  100   48    52 0.759  -0.70
 1.03 PlyA +  10365  10370    6                               1.05

 2.06 PlyA -  10440  10435    6                               1.05
 2.05 Term -  16698  16615   84  0  0   72   54    42 0.171  -3.15
 2.04 Intr -  25190  25043  148  1  1   76   78   325 0.082  30.54
 2.03 Intr -  40758  40728   31  1  1   63   95    29 0.004  -1.71
 2.02 Intr -  47223  47123  101  2  2  125   45    59 0.968   5.05
 2.01 Init -  47697  47660   38  0  2   98   80   111 0.982   8.79
 2.00 Prom -  48248  48209   40                              -7.96

 3.09 PlyA -  49907  49902    6                              -0.45
 3.08 Term -  51186  50918  269  1  2   82   48   299 0.934  20.96
 3.07 Intr -  57565  57373  193  1  1  138   96   160 0.995  20.87
 3.06 Intr -  60146  60054   93  2  0   61   78   140 0.913  10.46
 3.05 Intr -  62109  61926  184  2  1   64  -24   189 0.784   5.09
 3.04 Intr -  63094  62875  220  2  1  137   59   473 0.938  46.66
 3.03 Intr -  65526  65421  106  0  1   98   80    29 0.894   2.89
 3.02 Intr -  71234  71168   67  1  1   47   91    32 0.343  -1.69
 3.01 Init -  71831  71488  344  2  2   56   80   242 0.461  14.93
 3.00 Prom -  73402  73363   40                              -3.06

 4.03 PlyA -  73554  73549    6                               1.05
 4.02 Term - 100057  99998   60  1  0   99   41    64 0.494   0.60
 4.01 Init - 100464 100165  300  0  0   90  115   426 0.928  42.75
 4.00 Prom - 105200 105161   40                              -4.26

 5.00 Prom + 123866 123905   40                              -3.56
 5.01 Init + 130102 130166   65  0  2   62   61    57 0.018   1.02
 5.02 Intr + 148470 148539   70  0  1  106   73    72 0.076   6.68
 5.03 Term + 154080 154247  168  2  0   59   47   139 0.939   4.78
 5.04 PlyA + 157058 157063    6                               1.05

 6.03 PlyA - 158572 158567    6                               1.05
 6.02 Term - 160728 160508  221  1  2   37   43   191 0.963   6.70
 6.01 Init - 162169 162106   64  1  1   60   89    19 0.940   0.52
 6.00 Prom - 164544 164505   40                              -8.16

 7.03 PlyA - 164673 164668    6                               1.05
 7.02 Term - 167443 166948  496  0  1   64   38  1605 0.838 147.14
 7.01 Init - 168230 168163   68  2  2   79   84    68 0.543   4.06
 7.00 Prom - 168287 168248   40                              -4.76

 8.05 PlyA - 169530 169525    6                               1.05
 8.04 Term - 175833 175771   63  0  0   84   42    70 0.249  -0.11
 8.03 Intr - 185548 185432  117  1  0   70   90    47 0.735   3.76
 8.02 Intr - 188543 188370  174  2  0   48   59   205 0.718  13.74
 8.01 Init - 189624 189553   72  0  0   68   90    20 0.806  -0.73
 8.00 Prom - 191325 191286   40                              -0.06


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:23458963_23659426|GENSCAN_predicted_peptide_1|41_aa
MQYIIIAKSMGLSPNYLDLNSSSTRQWTQTLKVHGVTSRTL

>gi568815597r:23458963_23659426|GENSCAN_predicted_CDS_1|126_bp
atgcagtacatcatcattgctaaaagtatggggctgtccccaaactacctggatttgaat
tccagctccaccaggcaatggacccagaccctgaaggtccatggtgttactagcaggaca
ctgtga

>gi568815597r:23458963_23659426|GENSCAN_predicted_peptide_2|133_aa
MVATRLASLLAPGFLKGLAAHTLPPTLYISGSNCSPQTSSSSITWKYPSTDPGRENSSTL
APAMPEQFSVAEFLAVTAEDLSSPAGAAAFAAKMPRYRGAALAREEVLRHPSGDVKKAVC
EFGIQRSGLEIHI

>gi568815597r:23458963_23659426|GENSCAN_predicted_CDS_2|402_bp
atggtggccacacgcctggccagcctgctggctcctggcttcctgaaaggtcttgctgcc
cacactctccctcccaccctctacatcagtgggtccaactgtagtcctcagaccagcagc
agcagtatcacctggaaatatccttccacagatcctggaagagagaacagctccacgctc
gcgcccgccatgccggagcagttcagcgtcgccgagttcctggccgtcaccgcggaggac
ctcagctccccggctggggccgccgccttcgccgccaagatgccccggtaccgaggggcg
gcgctggcgcgggaggaggtcttgagacatccaagtggagatgtcaagaaggcagtatgt
gagtttggaattcaaaggagcgggctggagatacacatttga

>gi568815597r:23458963_23659426|GENSCAN_predicted_peptide_3|491_aa
MLQGPRALASAAGQTPKVVPAMSPTELWPSGLSSPQLCPATATYYTPLYPQTAPPAAAPG
TCLDATPHGPEGQVVRCLPAGRLPVMLGAPTASPYAFPGVGKEGGVPEIQFEWSRNQYWV
PAIVQAKSMAWGHCGTLAKRKLDLEGIGRPVVPEFPTPKGKCIRVDGLPSPKTPKSPGEK
TRYDTSLGLLTKKFIYLLSESEDGVLDLNWAAEVLDVQKRRIYDITNVLEGIQLIRKKAK
NNIQWVGRGMFEDPTRPGKQQQLGQELKELMNTEQALDQLIQSCSLSFKHLTEDKANKRY
PPWLGEGDIRAVGNFKEQTVIAVKAPPQTRLEVPDRTEDNLQIYLKSTQGPIEVYLCPEE
VQEPDSPSEEPLPSTSTLCPSPDSAQPSSSTDPSIMEPTASSVPAPAPTPQQAPPPPSLV
PLEATDSLLELPHPLLQQTEDQFLSPTLACSSPLISFSPSLDQDDYLWGLEAGEGISDLF
DSYDLGDLLIN

>gi568815597r:23458963_23659426|GENSCAN_predicted_CDS_3|1476_bp
atgctgcaagggccccgggccttggcttcggccgctgggcagaccccgaaggtggtgccc
gcgatgagccccacagagctgtggccatccggcctcagcagcccccagctctgcccagct
actgctacctactacacaccgctgtacccgcagacggcgcctcccgcagcggcgccaggc
acctgcctcgacgccactccccacggacccgagggccaagttgtgcgatgcctgccggca
ggccggctgccggtaatgctgggggcccccaccgcttccccctatgcttttccaggtgtg
ggaaaggagggaggggtgcctgagatccagtttgagtggagcagaaaccagtactgggtg
cctgctattgtccaggcaaagagtatggcctggggacactgtgggactttggccaaaagg
aagctggatctggaggggattgggaggcccgtcgtccctgagttcccaacccccaagggg
aagtgcatcagagtggatggcctccccagccccaaaacccccaaatcccccggggagaag
actcggtatgacacttcgctggggctgctcaccaagaagttcatttacctcctgagcgag
tcagaggatggggtcctggacctgaactgggccgctgaggtgctggacgtgcagaagcgg
cgcatctatgacatcaccaacgtgctggaaggcatccagctcatccgcaagaaggccaag
aacaacatccagtgggtaggcaggggaatgtttgaagaccccaccagacctgggaagcag
caacagctggggcaggagctgaaggagctgatgaacacggagcaggccttggaccagctc
atccagagctgctctctgagcttcaagcacctgactgaggacaaggccaacaagagatat
cctccttggttgggggaaggtgatatccgtgctgttggcaactttaaggagcagacagtg
attgccgtcaaggcccctccgcagacgagactggaagtgcccgacaggactgaggacaac
ctgcagatatatctcaagagcacccaagggcccatcgaagtctacctgtgcccagaggag
gtgcaggagccggacagtccttccgaggagcctctcccctctacctccaccctctgcccc
agccctgactctgcccagcccagcagcagcaccgaccctagcatcatggagcccacagca
tcctcagtgccagcaccagcgccaaccccccagcaggccccaccgcctccatccctggtc
cccttggaggctactgacagcctgctggagctgccgcacccactcctgcagcagactgag
gaccagttcctgtccccgaccctggcgtgcagctcccctctgatcagcttctccccatcc
ttggaccaggacgactacctgtggggcttggaggcgggtgagggcatcagcgatctcttc
gactcctacgaccttggggacctgttgattaattga

>gi568815597r:23458963_23659426|GENSCAN_predicted_peptide_4|119_aa
MKALSPVRGCYEAVCCLSERSLAIARGRGKGPAAEEPLSLLDDMNHCYSRLRELVPGVPR
GTQLSQVEILQRVIDYILDLQVVLAEPAPGPPDGPHLPIQTAELTPELVISNDKRSFCH

>gi568815597r:23458963_23659426|GENSCAN_predicted_CDS_4|360_bp
atgaaggcgctgagcccggtgcgcggctgctacgaggcggtgtgctgcctgtcggaacgc
agtctggccatcgcccggggccgagggaagggcccggcagctgaggagccgctgagcttg
ctggacgacatgaaccactgctactcccgcctgcgggaactggtacccggagtcccgaga
ggcactcagcttagccaggtggaaatcctacagcgcgtcatcgactacattctcgacctg
caggtagtcctggccgagccagcccctggaccccctgatggcccccaccttcccatccag
acagccgagctcactccggaacttgtcatctccaacgacaaaaggagcttttgccactga

>gi568815597r:23458963_23659426|GENSCAN_predicted_peptide_5|100_aa
MQREHGPEPLVRFLRKGMGEVGTYLSTVPDFNGTGSIGGQNIQGYETQIVMITGIVVQNN
TGDDDNTTIMEGAYFHWLNNYPNAHMEGAWGFKKRLLEAG

>gi568815597r:23458963_23659426|GENSCAN_predicted_CDS_5|303_bp
atgcaaagagagcatggcccagagcctttagtgcggtttttgcggaaaggaatgggcgag
gtaggaacatacctgtccacagtccctgacttcaatggcacagggtccattgggggccag
aacattcaaggctatgaaacccagattgttatgattactggtattgttgtccaaaacaat
actggagacgatgacaatacaacaatcatggagggtgcttatttccactggctcaacaat
tatcccaacgcccatatggagggggcctggggcttcaagaagaggcttctcgaggcagga
tga

>gi568815597r:23458963_23659426|GENSCAN_predicted_peptide_6|94_aa
MDWIGKLDEELRSRPHLGQYPGPSPTPTRAHPPRRRRHRLRTCRACCGEARLCCGGGGGG
GGWRGGDADSHSRPYRLLPASPPELRHQALGALP

>gi568815597r:23458963_23659426|GENSCAN_predicted_CDS_6|285_bp
atggattggattggaaagctggatgaggagctgaggagcagacctcacctgggacaatat
ccaggtccctcgcccacgcccacgcgggcgcacccgccgcgccgacgccgccaccggctg
cgcacctgccgcgcttgctgcggggaagccaggctctgctgtggcggcggcggcggcggc
ggcggctggcggggaggagacgcggactcccactcgcggccctatcgcttgctccccgcc
tccccgccagagctgcgccaccaggctctgggcgcgctcccatga

>gi568815597r:23458963_23659426|GENSCAN_predicted_peptide_7|187_aa
MRLEVQELGPAGGTWQVTFPLKGILIIPIIIPIIIIPIIIITITIIPIIIIPITIIPITI
IPTIIIPIITIIPIIIIPITIIPITIIPTIIIPIIIITIIIIPIIITITTIIIIPNITII
IIPIIITITITIIIIPITIITITINITIITITIIPIITIIITITIIPIIIILLLITIIVI
CMEASLY

>gi568815597r:23458963_23659426|GENSCAN_predicted_CDS_7|564_bp
atgaggctggaagtgcaggaacttggaccggcggggggaacctggcaggtcacattccct
ctcaagggaatcctcatcatccccatcatcatccccatcatcatcatccccatcatcatc
atcaccatcaccatcatccccatcatcatcatccccatcaccatcatccccatcaccatc
atccccaccatcatcatccccatcatcaccatcatccccatcatcatcatccccatcacc
atcatccccatcaccatcatccccaccatcatcatccccatcatcatcatcaccatcatc
atcatccccatcatcatcaccatcaccaccatcatcatcatccccaacatcaccatcatc
atcatccccatcatcatcaccatcaccatcaccatcatcatcatccccatcaccatcatc
accatcaccatcaacatcaccatcatcaccatcaccatcatccccatcatcaccatcatc
atcaccatcaccatcatccctatcattatcatcctcctcctgatcaccataattgtcatc
tgcatggaagctagcctatattga

>gi568815597r:23458963_23659426|GENSCAN_predicted_peptide_8|141_aa
MQENRHSRRAWWLMPVIPALWEAELSTDAGAALQVGSYLQDQQQDKVTRVQHSGCGHQKA
QQGRYQKPYVQGSLPAKIMAVKAPFPNTVAMGLKAATCDSGEDTIQSTAGAMEGFKQGGP
RCSIQNGQLSSLSFPEAFTGS

>gi568815597r:23458963_23659426|GENSCAN_predicted_CDS_8|426_bp
atgcaggaaaacaggcactctcgccgggcgtggtggctcatgcctgtaatccccgcactt
tgggaggctgagttgagcacagatgcaggggctgcactccaggtgggctcctatctgcag
gaccagcagcaggacaaggtcaccagggtccagcacagcggctgtggacaccagaaggca
cagcaaggaagataccagaagccctatgtccagggctcgcttccagccaaaatcatggca
gtcaaggccccttttccaaacacagttgcaatgggacttaaagctgcaacatgtgattct
ggggaggacacaattcagtccacagcaggggccatggaaggttttaagcagggaggtcct
aggtgttccatccagaatggacagctgtcctcactgtccttccctgaagccttcactggc
tcctaa