GENSCAN 1.0	Date run:  6-Nov-116	Time: 23:21:23

Sequence gi568815582f:14544347_14767824 : 223478 bp : 45.46% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.21 PlyA -   2090   2085    6                               1.05
 1.20 Term -   4297   4290    8  2  2  114   46     0 0.234  -3.57
 1.19 Intr -   7749   7675   75  1  0   90  111    38 0.624   5.79
 1.18 Intr -   9805   9719   87  2  0   66  111    20 0.471   2.04
 1.17 Intr -  11363  11308   56  1  2  109   93    28 0.219   4.02
 1.16 Intr -  36597  36528   70  1  1  111  108   -26 0.128  -0.06
 1.15 Intr -  37945  37835  111  2  0   73   73   180 0.999  15.35
 1.14 Intr -  40076  40001   76  2  1  111   91    78 0.983   9.49
 1.13 Intr -  49032  48955   78  0  0   50  115    64 0.409   5.05
 1.12 Intr -  55614  55558   57  0  0   43  123    25 0.224   0.58
 1.11 Intr -  59880  59800   81  0  0   52   91    83 0.360   4.83
 1.10 Intr -  62180  62138   43  1  1  122   86    16 0.256   3.04
 1.09 Intr -  66463  66298  166  2  1   55   78   115 0.548   6.22
 1.08 Intr -  73304  73244   61  2  1   92   95    22 0.133   1.61
 1.07 Intr -  81450  81418   33  0  0  117   61    28 0.258   1.42
 1.06 Intr -  82841  82760   82  1  1  109  111   -10 0.378   3.04
 1.05 Intr -  83905  83845   61  2  1   47   54    40 0.308  -5.71
 1.04 Intr -  85373  85251  123  0  0  104   68   154 0.480  15.56
 1.03 Intr -  85580  85454  127  2  1   23   12    91 0.246  -4.75
 1.02 Intr -  85989  85810  180  0  0   63   39   105 0.176   3.16
 1.01 Init -  86193  86146   48  0  0   84   58    14 0.413  -1.04
 1.00 Prom -  91072  91033   40                              -2.66

 2.00 Prom +  95901  95940   40                              -5.56
 2.01 Init + 100001 100263  263  1  2   68   95    65 0.350   1.74
 2.02 Intr + 104042 104246  205  2  1  114   92    59 0.997   8.10
 2.03 Intr + 105458 105627  170  1  2  101  100   130 0.984  14.24
 2.04 Intr + 110720 110864  145  2  1   93   61   129 0.998  10.98
 2.05 Intr + 117546 117719  174  2  0  112   82   191 0.998  21.04
 2.06 Intr + 120523 120725  203  0  2   74  100    99 0.907   7.78
 2.07 Term + 123289 123481  193  1  1  116   42    52 0.469   0.29
 2.08 PlyA + 124516 124521    6                               1.05

 3.05 PlyA - 124588 124583    6                               1.05
 3.04 Term - 128403 128261  143  1  2  107   42   131 0.961   8.49
 3.03 Intr - 143925 143819  107  2  2   93  101   162 0.981  17.86
 3.02 Intr - 146299 146149  151  2  1   99  105   103 0.905  12.32
 3.01 Init - 149883 149787   97  0  1   51   96   243 0.569  19.87
 3.00 Prom - 152289 152250   40                              -7.16

 4.02 PlyA - 154241 154236    6                               1.05
 4.01 Sngl - 159211 158651  561  1  0   84   40   351 0.273  26.04
 4.00 Prom - 161574 161535   40                              -4.16

 5.00 Prom + 162087 162126   40                              -5.46
 5.01 Init + 164598 164717  120  2  0   39  113   143 0.936  11.19
 5.02 Intr + 171722 171850  129  1  0   82   56    48 0.765   1.89
 5.03 Intr + 175481 175580  100  1  1   95   86    37 0.977   3.88
 5.04 Intr + 175744 175888  145  2  1   49   61   140 0.918   6.74
 5.05 Intr + 178846 178953  108  1  0  100   84    84 0.401   8.60
 5.06 Intr + 180142 180177   36  1  0   88  114     7 0.200   0.68
 5.07 Term + 181537 181612   76  1  1   88   42    45 0.169  -2.79
 5.08 PlyA + 181953 181958    6                               1.05

 6.05 PlyA - 182380 182375    6                               1.05
 6.04 Term - 182744 182740    5  0  2   65   40     0 0.346 -10.03
 6.03 Intr - 183042 182936  107  2  2   93  101   162 0.961  17.86
 6.02 Intr - 185416 185266  151  2  1   99  105   103 0.905  12.32
 6.01 Init - 189001 188905   97  1  1   51   96   243 0.569  19.87
 6.00 Prom - 191407 191368   40                              -7.16

 7.02 PlyA - 193359 193354    6                               1.05
 7.01 Sngl - 198333 197773  561  0  0   84   40   351 0.273  26.04
 7.00 Prom - 200696 200657   40                              -4.16

 8.00 Prom + 201209 201248   40                              -5.46
 8.01 Init + 203720 203839  120  1  0   39  113   143 0.936  11.19
 8.02 Intr + 210846 210974  129  2  0   82   56    48 0.765   1.89
 8.03 Intr + 214601 214700  100  1  1   95   86    37 0.976   3.88
 8.04 Intr + 214864 215008  145  2  1   49   61   140 0.915   6.74
 8.05 Intr + 217966 218073  108  1  0  100   84    84 0.412   8.60
 8.06 Intr + 219262 219297   36  1  0   88  114     7 0.208   0.68
 8.07 Term + 220657 220732   76  1  1   88   42    45 0.169  -2.79
 8.08 PlyA + 221073 221078    6                               1.05

 9.03 PlyA - 221500 221495    6                               1.05
 9.02 Term - 221864 221860    5  0  2   65   40     0 0.350 -10.03
 9.01 Intr - 222162 222056  107  2  2   93  101   162 0.925  17.86

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:14544347_14767824|GENSCAN_predicted_peptide_1|540_aa
MGQGARLPVHHCISTPEGKEPSLGPAPAAAQALTQAQQARAVSGSRGRRHRCGCLSYCRS
RRGIRRVEPLRRARAREPCTYSSNPGTIRGLVLLRAGHPPGLVPPDPCTPRGLDSPRPGI
QATGSEPLFGFSADFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEER
YITKSFNFYVFPKPFNRSSPDVKFVCQINGNAVMKASRSSSIDFLASQGFDFNKVFRNGI
PYLNQEEERQLREQYDEKRSQANGAGALSYVSPNTSKCPVTIPEDQKKFIDQVVYPKGIH
VETLETEKKERYIVISKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIG
HNMLLDVMHTVHQFYCPLPADIINNTSLAELEKRLKETPFNPPKVESAEGFPSYDTASEQ
LHEAGYDAYITGLCFISMANYLGSFLSPPKIHVSARSKLIEPFFNKLFLMRVMDIPYLNL
EGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVKIGY

>gi568815582f:14544347_14767824|GENSCAN_predicted_CDS_1|1623_bp
atggggcagggagcacgtcttcctgttcatcactgtatctccacccctgagggaaaggag
cccagccttggccccgcccccgccgccgcgcaggcgctgacgcaagcgcagcaggcgcgc
gctgtttccggaagtcgcggccggcgtcaccgctgcggctgcctcagctactgccgcagt
cgccgcggaattcggcgagtagaaccgctgaggcgggcgcgggcccgggagccttgtact
tactcctccaaccccggcaccatccggggccttgtccttctccgggccgggcaccccccg
gggcttgtcccccctgacccatgcacccctcgaggacttgattcccctcgccccggaatt
caggccactggttctgagcctcttttcggtttctccgcagattttaagagtaatcttcac
aaagtgtaccaggccatagaggaggccgacttcttcgccatcgatggggagttttcagga
atcagtgatggaccttcagtctctgcattaacaaatggttttgacactccagaagagagg
tatataacgaagtcatttaacttctatgttttcccgaaacccttcaatagatcctcacca
gatgtcaaatttgtttgtcagattaatggtaatgcagttatgaaagcctcgaggagctcc
agcattgactttctagcaagccagggatttgattttaataaagtttttcgaaatggaatt
ccatatttaaatcaggaagaagaaagacagttaagagagcagtatgatgaaaaacgttca
caggcgaatggtgcaggagctctgtcctatgtatctcctaacacttcaaaatgtcctgtc
acgattcctgaggatcaaaagaagtttattgaccaagtggtgtatccgaaaggcattcat
gttgagactttagaaactgaaaagaaggagcgatatatagttatcagcaaagtagatgaa
gaagaacgcaaaagaagagagcagcagaaacatgccaaagaacaggaggagctgaatgat
gctgtgggattttctagagtcattcacgccattgctaattcgggaaaacttgttattgga
cacaatatgctcttggacgtcatgcacacagttcatcagttctactgccctctgcctgcg
gatatcattaacaacacatcccttgcggaattggaaaagcggttaaaagagacacctttc
aaccctcctaaagttgaaagtgccgaaggttttccaagttatgacacagcctctgaacaa
ctccacgaggcaggctacgatgcctacatcacagggctgtgcttcatctccatggccaat
tacctaggttcttttctcagccctccaaaaattcatgtgtctgccagatcaaaactcatt
gaacctttttttaacaagttatttcttatgagggtcatggatatcccctatctaaacttg
gaaggaccagacttgcagcctaaacgtgatcatgttctccatgtgacattccccaaagaa
tggaaaaccagcgacctttaccagcttttcagtgcctttggtaacattcagatatcctgg
attgatgacacatcagcatttgtttcccttagccagcccgagcaagtaaagattgggtat
tga

>gi568815582f:14544347_14767824|GENSCAN_predicted_peptide_2|450_aa
MEEPQKSYVNTMDLERDEPLKSTGPQISVSEFSCHCCYDILVNPTTLNCGHSFCRHCLAL
WWASSKKTECPECREKWEGFPKVSILLRDAIEKLFPDAIRLRFEDIQQNNDIVQSLAAFQ
KYGNDQIPLAPNTGRANQQMGGGFFSGVLTALTGVAVVLLVYHWSSRESEHDLLVHKAVA
KWTAEEVVLWLEQLGPWASLYRERFLSERVNGRLLLTLTEEEFSKTPYTIENSSHRRAIL
MELERVKALGVKPPQNLWEYKAVNPGRSLFLLYALKSSPRLSLLYLYLFDYTDTFLPFIH
TICPLQEDSSGEDIVTKLLDLKEPTWKQWREFLVKYSFLPYQLIAEFAWDWLEVHYWTSR
FLIINAMLLSVLELFSFWRIWSRSELKTVPQRMWSHFWKVSTQGLFVAMFWPLIPQFVCN
CLFYWALYFNPIINIDLVVKELRRLETQVL

>gi568815582f:14544347_14767824|GENSCAN_predicted_CDS_2|1353_bp
atggaggaacctcagaaaagctatgtgaacacaatggaccttgagagagatgaacctctc
aaaagcaccggccctcagatttctgttagtgaattttcttgccactgctgctacgacatc
ctggttaaccccaccaccttgaactgtgggcacagcttctgccgtcactgccttgcttta
tggtgggcatcttcaaagaaaacagaatgtccagaatgcagagaaaaatgggaaggtttc
cccaaagtcagtattctcctcagggatgccattgaaaagttatttcctgatgccattaga
ctgagatttgaagacattcagcagaataatgacatagtccaaagtcttgcagcctttcag
aaatatgggaatgatcagattcctttagctcctaacacaggccgagcgaatcagcagatg
ggagggggattcttttccggtgtgctcacagctttaactggagtggcagtggtcctgctc
gtctatcactggagcagcagggaatctgaacacgacctcctggtccacaaggctgtggcc
aaatggacggcggaagaagttgtcctctggctggagcagctgggcccttgggcatctctt
tacagggaaaggtttttatctgaacgagtaaatggaaggttgcttttaactttgacagag
gaagaattttccaagacgccctataccatagaaaacagcagccacaggagagccatcctc
atggagctagaacgtgtcaaagcattaggcgtgaagcccccccagaatctctgggaatat
aaggctgtgaacccaggcaggtccctgttcctgctatacgccctcaagagctcccccagg
ctgagtctgctctacctgtacctgtttgactacaccgacaccttcctacctttcatccac
accatctgccctctgcaagaagacagctctggggaggacatcgtcaccaagcttctggat
cttaaggagcctacgtggaagcagtggagagagttcctggtcaaatactccttccttcca
taccagctgattgctgagtttgcttgggactggttggaggtccattactggacatcacgg
tttctcatcatcaatgctatgttactctcagttctggaattattctccttttggagaatc
tggtcgagaagtgaactgaagaccgtgcctcagaggatgtggagccatttctggaaagta
tcaacgcaggggctttttgtggccatgttctggcccctcatccctcagtttgtttgcaac
tgtttgttttactgggccctgtactttaacccaattattaacattgatcttgtggtcaag
gaactccggcggctggaaacccaggtgttgtga

>gi568815582f:14544347_14767824|GENSCAN_predicted_peptide_3|165_aa
MGPLPVCLPIMLLLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPI
AYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGP
AENKCQELLCKCDQEIANCLAQTEYNLKYLFYPQFLCEPDSPKCD

>gi568815582f:14544347_14767824|GENSCAN_predicted_CDS_3|498_bp
atggggccgctacctgtgtgcctgccaatcatgctgctcctgctactgccgtcgctgctg
ctgctgctgcttctacctggccccgggtccggcgaggcctccaggatattacgtgtgcac
cggcgtgggatcctggaactggcaggaactgtgggttgtgttggtccccgaacccccatc
gcctatatgaaatatggttgcttttgtggcttgggaggccatggccagccccgcgatgcc
attgactggtgctgccatggccacgactgttgttacactcgagctgaggaggccggctgc
agccccaagacagagcgctactcctggcagtgcgtcaatcagagcgtcctgtgcggaccg
gcagagaacaaatgccaagaactgttgtgcaagtgtgaccaggagattgctaactgctta
gcccaaactgagtacaacttaaagtacctcttctacccccagttcctatgtgagccggac
tcgcccaagtgtgactga

>gi568815582f:14544347_14767824|GENSCAN_predicted_peptide_4|186_aa
MATCGELSVNCCAADFSEQRRRLERRRRQVEPGPRGPGMGQQPLQPGSPGRGAGRQRASR
QPPCGALTSLQAAPQQPPGSAHTSLQGSPLALHLPPPPRGVNCAVCRPGYADPGSPGPQQ
PDEEPRATARGYEKEQDGAPEKCKSSELGPPCQERLGAEDGEMEMEKRQVGRSGAPPVGS
ACAGGA

>gi568815582f:14544347_14767824|GENSCAN_predicted_CDS_4|561_bp
atggcgacctgcggcgagctgagcgtcaactgctgcgccgccgacttctcggagcagcga
aggcgactcgagagaagacgccgccaagtggaacccgggccccgcggccctgggatgggg
cagcagccactgcagccaggaagccctgggcggggcgctgggcgccaacgagcgtcacgg
caacctccatgcggcgccctcaccagcctacaggcggcaccgcagcagcctccaggcagc
gcccacaccagcctacaggggtcgccgctcgcactgcacctgcctccgccgccccggggt
gtgaactgcgctgtctgtcggcctggctacgctgacccgggcagcccaggcccgcagcag
ccggacgaggagcccagggccactgcccggggttacgagaaggagcaggacggtgcccca
gaaaaatgcaagagctcagagctagggcccccgtgccaggaaaggctaggagcagaagat
ggagagatggagatggagaagcggcaggtgggaaggagcggcgctccaccggtggggtca
gcatgcgctggcggggcttag

>gi568815582f:14544347_14767824|GENSCAN_predicted_peptide_5|237_aa
MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW
LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKI
VLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE
RQVSEAEENGKLDMKEIHTYISPLLQESLFATGSEWRQRSIVILQDCPTGPTSQLKL

>gi568815582f:14544347_14767824|GENSCAN_predicted_CDS_5|714_bp
atggtgaagctctctattgtcctgaccccacggttcctgtcccatgaccagggccagctc
accaaggagctgcagcagcacgtaaagtcagtgacatgcccatgcgagtacctgaggaag
gttatcaatactctggctgaccatcgtcatcgtgggactgactttggtggaagtccttgg
ttacttatcattactgtgtttctgagaagttataaatttgccatctccctctgcacaagt
tacctttgtgtgtctttcctgaagactatcttcccgtctcaaaatggacatgatggatcc
acggatgtacagcagagagccaggaggtccaaccgccgtagacaggaaggaattaaaatt
gtcctggaagacatctttactttatggagacaggtggaaaccaaagttcgagctaaaatc
tgtaagatgaaggtgacaacaaaagtcaaccgtcatgacaaaatcaatggaaagaggaag
accgccaaagaacatctgaggaaactaagcatgaaagaacgtgagcacggagaaaaggag
aggcaggtgtcagaggcagaggaaaacgggaaattggatatgaaagaaatacacacctac
atatcaccccttctgcaagaaagcctctttgcaaccgggtcagaatggcggcagcggagc
atcgtcattcttcaggattgccctactggccctacctcacagctgaaactttaa

>gi568815582f:14544347_14767824|GENSCAN_predicted_peptide_6|119_aa
MGPLPVCLPIMLLLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPI
AYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCG

>gi568815582f:14544347_14767824|GENSCAN_predicted_CDS_6|360_bp
atggggccgctacctgtgtgcctgccaatcatgctgctcctgctactgccgtcgctgctg
ctgctgctgcttctacctggccccgggtccggcgaggcctccaggatattacgtgtgcac
cggcgtgggatcctggaactggcaggaactgtgggttgtgttggtccccgaacccccatc
gcctatatgaaatatggttgcttttgtggcttgggaggccatggccagccccgcgatgcc
attgactggtgctgccatggccacgactgttgttacactcgagctgaggaggccggctgc
agccccaagacagagcgctactcctggcagtgcgtcaatcagagcgtcctgtgcggctag

>gi568815582f:14544347_14767824|GENSCAN_predicted_peptide_7|186_aa
MATCGELSVNCCAADFSEQRRRLERRRRQVEPGPRGPGMGQQPLQPGSPGRGAGRQRASR
QPPCGALTSLQAAPQQPPGSAHTSLQGSPLALHLPPPPRGVNCAVCRPGYADPGSPGPQQ
PDEEPRATARGYEKEQDGAPEKCKSSELGPPCQERLGAEDGEMEMEKRQVGRSGAPPVGS
ACAGGA

>gi568815582f:14544347_14767824|GENSCAN_predicted_CDS_7|561_bp
atggcgacctgcggcgagctgagcgtcaactgctgcgccgccgacttctcggagcagcga
aggcgactcgagagaagacgccgccaagtggaacccgggccccgcggccctgggatgggg
cagcagccactgcagccaggaagccctgggcggggcgctgggcgccaacgagcgtcacgg
caacctccatgcggcgccctcaccagcctacaggcggcaccgcagcagcctccaggcagc
gcccacaccagcctacaggggtcgccgctcgcactgcacctgcctccgccgccccggggt
gtgaactgcgctgtctgtcggcctggctacgctgacccgggcagcccaggcccgcagcag
ccggacgaggagcccagggccactgcccggggttacgagaaggagcaggacggtgcccca
gaaaaatgcaagagctcagagctagggcccccgtgccaggaaaggctaggagcagaagat
ggagagatggagatggagaagcggcaggtgggaaggagcggcgctccaccggtggggtca
gcatgcgctggcggggcttag

>gi568815582f:14544347_14767824|GENSCAN_predicted_peptide_8|237_aa
MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW
LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKI
VLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE
RQVSEAEENGKLDMKEIHTYISPLLQESLFATGSEWRQRSIVILQDCPTGPTSQLKL

>gi568815582f:14544347_14767824|GENSCAN_predicted_CDS_8|714_bp
atggtgaagctctctattgtcctgaccccacggttcctgtcccatgaccagggccagctc
accaaggagctgcagcagcacgtaaagtcagtgacatgcccatgcgagtacctgaggaag
gttatcaatactctggctgaccatcgtcatcgtgggactgactttggtggaagtccttgg
ttacttatcattactgtgtttctgagaagttataaatttgccatctccctctgcacaagt
tacctttgtgtgtctttcctgaagactatcttcccgtctcaaaatggacatgatggatcc
acggatgtacagcagagagccaggaggtccaaccgccgtagacaggaaggaattaaaatt
gtcctggaagacatctttactttatggagacaggtggaaaccaaagttcgagctaaaatc
tgtaagatgaaggtgacaacaaaagtcaaccgtcatgacaaaatcaatggaaagaggaag
accgccaaagaacatctgaggaaactaagcatgaaagaacgtgagcacggagaaaaggag
aggcaggtgtcagaggcagaggaaaacgggaaattggatatgaaagaaatacacacctac
atatcaccccttctgcaagaaagcctctttgcaaccgggtcagaatggcggcagcggagc
atcgtcattcttcaggattgccctactggccctacctcacagctgaaactttaa

>gi568815582f:14544347_14767824|GENSCAN_predicted_peptide_9|37_aa
XCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCG

>gi568815582f:14544347_14767824|GENSCAN_predicted_CDS_9|114_bp
nngtgctgccatggccacgactgttgttacactcgagctgaggaggccggctgcagcccc
aagacagagcgctactcctggcagtgcgtcaatcagagcgtcctgtgcggctag