Result of FASTA (ccds) for pF1KB5329
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5329, 166 aa
  1>>>pF1KB5329 166 - 166 aa - 166 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.9242+/-0.000617; mu= 14.1317+/- 0.037
 mean_var=56.1401+/-11.296, 0's: 0 Z-trim(109.6): 37  B-trim: 0 in 0/51
 Lambda= 0.171174
 statistics sampled from 10946 (10983) to 10946 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.723), E-opt: 0.2 (0.337), width:  16
 Scan time:  1.440

The best scores are:                                      opt bits E(32554)
CCDS4826.1 PPIL1 gene_id:51645|Hs108|chr6          ( 166) 1153 292.2   1e-79
CCDS64162.1 PPWD1 gene_id:23398|Hs108|chr5         ( 490)  544 142.0 4.6e-34
CCDS64161.1 PPWD1 gene_id:23398|Hs108|chr5         ( 616)  544 142.1 5.6e-34
CCDS3985.1 PPWD1 gene_id:23398|Hs108|chr5          ( 646)  544 142.1 5.9e-34
CCDS13793.1 PPIL2 gene_id:23759|Hs108|chr22        ( 520)  514 134.6 8.3e-32
CCDS46670.1 PPIL2 gene_id:23759|Hs108|chr22        ( 527)  514 134.6 8.4e-32
CCDS4133.1 PPIC gene_id:5480|Hs108|chr5            ( 212)  505 132.2 1.8e-31
CCDS10191.1 PPIB gene_id:5479|Hs108|chr15          ( 216)  485 127.3 5.7e-30
CCDS2333.1 PPIL3 gene_id:53938|Hs108|chr2          ( 161)  478 125.5 1.5e-29
CCDS75252.1 CWC27 gene_id:10283|Hs108|chr5         ( 381)  477 125.4 3.6e-29
CCDS3982.2 CWC27 gene_id:10283|Hs108|chr5          ( 472)  477 125.5 4.3e-29
CCDS5494.1 PPIA gene_id:5478|Hs108|chr7            ( 165)  432 114.1 3.9e-26
CCDS7358.1 PPIF gene_id:10105|Hs108|chr10          ( 207)  414 109.7   1e-24
CCDS34550.1 PPIL4 gene_id:85313|Hs108|chr6         ( 492)  402 107.0 1.7e-23
CCDS443.1 PPIE gene_id:10450|Hs108|chr1            ( 301)  396 105.4 3.1e-23
CCDS72898.1 PPIAL4C gene_id:653598|Hs108|chr1      ( 164)  393 104.5 3.1e-23
CCDS59199.1 PPIAL4D gene_id:645142|Hs108|chr1      ( 164)  392 104.2 3.7e-23
CCDS76202.1 PPIAL4F gene_id:728945|Hs108|chr1      ( 164)  392 104.2 3.7e-23
CCDS76201.1 PPIAL4E gene_id:730262|Hs108|chr1      ( 164)  392 104.2 3.7e-23
CCDS442.1 PPIE gene_id:10450|Hs108|chr1            ( 296)  394 104.9 4.3e-23
CCDS53299.1 PPIE gene_id:10450|Hs108|chr1          ( 314)  394 104.9 4.5e-23
CCDS41375.2 PPIAL4G gene_id:644591|Hs108|chr1      ( 164)  386 102.8   1e-22
CCDS469.1 PPIH gene_id:10465|Hs108|chr1            ( 177)  386 102.8 1.1e-22
CCDS76197.1 PPIAL4A gene_id:653505|Hs108|chr1      ( 164)  378 100.8   4e-22
CCDS81308.1 PPIH gene_id:10465|Hs108|chr1          ( 134)  360 96.3 7.4e-21
CCDS3801.1 PPID gene_id:5481|Hs108|chr4            ( 370)  356 95.5 3.5e-20
CCDS2702.1 NKTR gene_id:4820|Hs108|chr3            (1462)  361 97.1 4.7e-20
CCDS2235.1 PPIG gene_id:9360|Hs108|chr2            ( 754)  356 95.7 6.3e-20
CCDS2079.1 RANBP2 gene_id:5903|Hs108|chr2          (3224)  352 95.0 4.3e-19
CCDS75592.1 PPIA gene_id:5478|Hs108|chr7           ( 105)  325 87.6 2.4e-18
CCDS2332.1 PPIL3 gene_id:53938|Hs108|chr2          ( 165)  289 78.8 1.7e-15
CCDS69169.1 PPIL6 gene_id:285755|Hs108|chr6        ( 279)  288 78.7 3.1e-15
CCDS5074.1 PPIL6 gene_id:285755|Hs108|chr6         ( 311)  288 78.7 3.4e-15


>>CCDS4826.1 PPIL1 gene_id:51645|Hs108|chr6               (166 aa)
 initn: 1153 init1: 1153 opt: 1153  Z-score: 1544.9  bits: 292.2 E(32554): 1e-79
Smith-Waterman score: 1153; 100.0% identity (100.0% similar) in 166 aa overlap (1-166:1-166)

               10        20        30        40        50        60
pF1KB5 MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 MIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 MIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQ
               70        80        90       100       110       120

              130       140       150       160      
pF1KB5 WLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPSG
       ::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 WLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPSG
              130       140       150       160      

>>CCDS64162.1 PPWD1 gene_id:23398|Hs108|chr5              (490 aa)
 initn: 509 init1: 509 opt: 544  Z-score: 724.9  bits: 142.0 E(32554): 4.6e-34
Smith-Waterman score: 544; 56.2% identity (76.7% similar) in 146 aa overlap (16-160:340-485)

                              10        20        30        40     
pF1KB5                MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARR
                                     ..:::: :  .:.  . ::: .::   .: 
CCDS64 RDVFNEKPSKEEVMAATQAEGPKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRN
     310       320       330       340       350       360         

          50        60        70        80        90       100     
pF1KB5 GYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGP
       :::::  :::::: :::: ::::::: :: ::.: .::::.:  :.      :.::::: 
CCDS64 GYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGS
     370       380       390       400       410       420         

         110       120       130       140       150        160    
pF1KB5 DTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQ-DRPVDDVKIIKAYP
       .:::::::.:..:: :::.:::.:::: .:. .:.:.. :..: . :.: .::.::    
CCDS64 NTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV
     430       440       450       460       470       480         

         
pF1KB5 SG
         
CCDS64 K 
     490 

>>CCDS64161.1 PPWD1 gene_id:23398|Hs108|chr5              (616 aa)
 initn: 509 init1: 509 opt: 544  Z-score: 723.4  bits: 142.1 E(32554): 5.6e-34
Smith-Waterman score: 544; 56.2% identity (76.7% similar) in 146 aa overlap (16-160:466-611)

                              10        20        30        40     
pF1KB5                MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARR
                                     ..:::: :  .:.  . ::: .::   .: 
CCDS64 RDVFNEKPSKEEVMAATQAEGPKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRN
         440       450       460       470       480       490     

          50        60        70        80        90       100     
pF1KB5 GYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGP
       :::::  :::::: :::: ::::::: :: ::.: .::::.:  :.      :.::::: 
CCDS64 GYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGS
         500       510       520       530       540       550     

         110       120       130       140       150        160    
pF1KB5 DTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQ-DRPVDDVKIIKAYP
       .:::::::.:..:: :::.:::.:::: .:. .:.:.. :..: . :.: .::.::    
CCDS64 NTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV
         560       570       580       590       600       610     

         
pF1KB5 SG
         
CCDS64 K 
         

>>CCDS3985.1 PPWD1 gene_id:23398|Hs108|chr5               (646 aa)
 initn: 509 init1: 509 opt: 544  Z-score: 723.1  bits: 142.1 E(32554): 5.9e-34
Smith-Waterman score: 544; 56.2% identity (76.7% similar) in 146 aa overlap (16-160:496-641)

                              10        20        30        40     
pF1KB5                MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARR
                                     ..:::: :  .:.  . ::: .::   .: 
CCDS39 RDVFNEKPSKEEVMAATQAEGPKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRN
         470       480       490       500       510       520     

          50        60        70        80        90       100     
pF1KB5 GYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGP
       :::::  :::::: :::: ::::::: :: ::.: .::::.:  :.      :.::::: 
CCDS39 GYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGS
         530       540       550       560       570       580     

         110       120       130       140       150        160    
pF1KB5 DTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQ-DRPVDDVKIIKAYP
       .:::::::.:..:: :::.:::.:::: .:. .:.:.. :..: . :.: .::.::    
CCDS39 NTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV
         590       600       610       620       630       640     

         
pF1KB5 SG
         
CCDS39 K 
         

>>CCDS13793.1 PPIL2 gene_id:23759|Hs108|chr22             (520 aa)
 initn: 496 init1: 472 opt: 514  Z-score: 684.5  bits: 134.6 E(32554): 8.3e-32
Smith-Waterman score: 514; 51.7% identity (77.6% similar) in 147 aa overlap (14-159:282-428)

                                10        20        30        40   
pF1KB5                  MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELA
                                     : :.:. : . :::.   .::::.:: .: 
CCDS13 STAMVPETTHEAAAIDEDVLRYQFVKKKGYVRLHTNKGDLNLELHCDLTPKTCENFIRLC
             260       270       280       290       300       310 

            50        60        70        80        90       100   
pF1KB5 RRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANA
       .. ::.:: ::: :..:.:::::::::: :: : .:: :.::..:.:. :: :::.:::.
CCDS13 KKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANS
             320       330       340       350       360       370 

           110       120       130       140       150        160  
pF1KB5 GPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQ-DRPVDDVKIIKA
       ::..: ::::.:.    .:: ::::::::  :. ... .  ::.. . ::: ....:   
CCDS13 GPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDAT
             380       390       400       410       420       430 

                                                                   
pF1KB5 YPSG                                                        
                                                                   
CCDS13 TVFVDPYEEADAQIAQERKTQLKVAPETKVKSSQPQAGSQGPQTFRQGVGKYINPAATKR
             440       450       460       470       480       490 

>>CCDS46670.1 PPIL2 gene_id:23759|Hs108|chr22             (527 aa)
 initn: 496 init1: 472 opt: 514  Z-score: 684.4  bits: 134.6 E(32554): 8.4e-32
Smith-Waterman score: 514; 51.7% identity (77.6% similar) in 147 aa overlap (14-159:282-428)

                                10        20        30        40   
pF1KB5                  MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELA
                                     : :.:. : . :::.   .::::.:: .: 
CCDS46 STAMVPETTHEAAAIDEDVLRYQFVKKKGYVRLHTNKGDLNLELHCDLTPKTCENFIRLC
             260       270       280       290       300       310 

            50        60        70        80        90       100   
pF1KB5 RRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANA
       .. ::.:: ::: :..:.:::::::::: :: : .:: :.::..:.:. :: :::.:::.
CCDS46 KKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANS
             320       330       340       350       360       370 

           110       120       130       140       150        160  
pF1KB5 GPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQ-DRPVDDVKIIKA
       ::..: ::::.:.    .:: ::::::::  :. ... .  ::.. . ::: ....:   
CCDS46 GPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDAT
             380       390       400       410       420       430 

                                                                   
pF1KB5 YPSG                                                        
                                                                   
CCDS46 TVFVDPYEEADAQIAQERKTQLKVAPETKVKSSQPQAGSQGPQTFRQGVGKYINPAATEQ
             440       450       460       470       480       490 

>>CCDS4133.1 PPIC gene_id:5480|Hs108|chr5                 (212 aa)
 initn: 477 init1: 353 opt: 505  Z-score: 678.4  bits: 132.2 E(32554): 1.8e-31
Smith-Waterman score: 505; 52.7% identity (77.3% similar) in 150 aa overlap (17-162:48-196)

                             10        20        30        40      
pF1KB5               MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELA--R
                                     . ..: ::. :. : .::: .::. ::  .
CCDS41 GALVFSSGAEGFRKRGPSVTAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGE
        20        30        40        50        60        70       

            50        60         70        80        90       100  
pF1KB5 RGY-YNGTKFHRIIKDFMIQGGD-PTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMAN
       .:: :.:.::::.::::::::::  :: : ::.::::. : :: .  ::  : : ..:::
CCDS41 KGYGYKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDE-NFKLKHYGIGWVSMAN
        80        90       100       110       120        130      

            110       120       130       140       150       160  
pF1KB5 AGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKA
       :::::::::::.::.   ::::::..::.: .:. .:. . .  :...:::. . .::..
CCDS41 AGPDTNGSQFFITLTKPTWLDGKHVVFGKVIDGMTVVHSIELQATDGHDRPLTNCSIINS
        140       150       160       170       180       190      

                       
pF1KB5 YPSG            
                       
CCDS41 GKIDVKTPFVVEIADW
        200       210  

>>CCDS10191.1 PPIB gene_id:5479|Hs108|chr15               (216 aa)
 initn: 491 init1: 349 opt: 485  Z-score: 651.6  bits: 127.3 E(32554): 5.7e-30
Smith-Waterman score: 485; 51.7% identity (76.2% similar) in 147 aa overlap (17-159:54-199)

                             10        20        30        40      
pF1KB5               MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELA--R
                                     . ..: ... :. : .:::  ::. ::  .
CCDS10 FLLLPGPSAADEKKKGPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGE
            30        40        50        60        70        80   

            50        60         70        80        90       100  
pF1KB5 RGY-YNGTKFHRIIKDFMIQGGDPT-GTGRGGASIYGKQFEDELHPDLKFTGAGILAMAN
       .:. :...::::.:::::::::: : : : :: ::::..: :: .  ::  : : ..:::
CCDS10 KGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDE-NFKLKHYGPGWVSMAN
            90       100       110       120        130       140  

            110       120       130       140       150       160  
pF1KB5 AGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKA
       :: ::::::::.: . : ::::::..::.: .:. .: .:  ..:.:.:.:. :: :   
CCDS10 AGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADC
            150       160       170       180       190       200  

                     
pF1KB5 YPSG          
                     
CCDS10 GKIEVEKPFAIAKE
            210      

>>CCDS2333.1 PPIL3 gene_id:53938|Hs108|chr2               (161 aa)
 initn: 448 init1: 424 opt: 478  Z-score: 644.2  bits: 125.5 E(32554): 1.5e-29
Smith-Waterman score: 478; 49.3% identity (74.3% similar) in 148 aa overlap (13-159:2-149)

               10        20        30        40        50        60
pF1KB5 MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDF
                   .: :.:..: : .:.. ...::::.::  :   .::::  ::: :: :
CCDS23            MSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGF
                          10        20        30        40         

               70        80        90       100       110       120
pF1KB5 MIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQ
       :.: :::::::::: ::.::.::::    :: .  :...::: ::.:::::::.: .   
CCDS23 MVQTGDPTGTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQP
      50        60        70        80        90       100         

              130       140       150        160           
pF1KB5 WLDGKHTIFGRVCQGIGMVNRVGMVETNSQD-RPVDDVKIIKAYPSG     
        :: :.:.::.: .:.  ....  . .: .  ::..::.:            
CCDS23 HLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFAQ
     110       120       130       140       150       160 

>>CCDS75252.1 CWC27 gene_id:10283|Hs108|chr5              (381 aa)
 initn: 475 init1: 452 opt: 477  Z-score: 637.2  bits: 125.4 E(32554): 3.6e-29
Smith-Waterman score: 477; 49.0% identity (74.2% similar) in 155 aa overlap (10-159:8-161)

               10           20        30        40        50       
pF1KB5 MAAIPPDSWQPPN---VYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRII
                .::.   : :.:. : : .::. :.:::.:.:: .:  ..::..: :::..
CCDS75   MSNIYIQEPPTNGKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVV
                 10        20        30        40        50        

        60        70        80        90       100       110       
pF1KB5 KDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLA
         :..::::::::: :: ::::  :.::.:  :.:.  :..::::::   :::::: ::.
CCDS75 PGFIVQGGDPTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLG
       60        70        80        90       100       110        

       120       130       140         150       160               
pF1KB5 PTQWLDGKHTIFGRVCQGIGMVN--RVGMVETNSQDRPVDDVKIIKAYPSG         
        .. :..::::::.:  :  . :  :.. :. ....:: .  ::                
CCDS75 RADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLFNPFDDIIPR
      120       130        140       150       160       170       

CCDS75 EIKRLKKEKPEEEVKKLKPKGTKNFSLLSFGEEAEEEEEEVNRVSQSMKGKSKSSHDLLK
       180       190       200       210       220       230       




166 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 12:28:54 2016 done: Sat Nov  5 12:28:54 2016
 Total Scan time:  1.440 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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