GENSCAN 1.0	Date run:  5-Nov-116	Time: 12:29:14

Sequence gi568815592r:36755816_36974772 : 218957 bp : 48.03% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.18 Intr -    483    430   54  0  0  103   79    68 0.607   6.58
 1.17 Intr -   7177   7102   76  0  1   90   78   115 0.512  10.22
 1.16 Intr -   9561   9520   42  2  0   74  115   118 0.798  10.46
 1.15 Intr -  19250  19146  105  1  0  134   89   149 0.956  18.93
 1.14 Intr -  23142  23039  104  0  2  117   92   113 0.386  13.57
 1.13 Intr -  36281  36218   64  1  1   90   96    92 0.961   8.92
 1.12 Intr -  38834  38775   60  1  0  149   87    24 0.963   6.25
 1.11 Intr -  42426  42350   77  0  2   59   94    67 0.597   2.71
 1.10 Intr -  42679  42640   40  0  1  122   94    14 0.987   3.63
 1.09 Intr -  44255  44152  104  2  2  108   84   252 0.994  25.77
 1.08 Intr -  49289  49153  137  0  2   83   89    82 0.936   8.09
 1.07 Intr -  58543  58363  181  1  1   36   49   104 0.129   0.74
 1.06 Intr -  66345  66299   47  1  2  124   92    34 0.594   5.53
 1.05 Intr -  67283  67243   41  1  2  140  113    61 0.599  11.67
 1.04 Intr -  71763  71574  190  1  1   72   72    73 0.186   2.74
 1.03 Intr -  74517  74469   49  0  1   68   51    40 0.125  -3.45
 1.02 Intr -  76561  76426  136  0  1   44   78   109 0.547   6.07
 1.01 Init -  83562  83468   95  0  2   80   99   172 0.616  17.37
 1.00 Prom -  98854  98815   40                              -4.46

 2.07 PlyA -  99038  99033    6                               1.05
 2.06 Term - 100218  99998  221  1  2  108   38   193 0.912  13.50
 2.05 Intr - 100839 100771   69  1  0   89  114    78 0.374   9.65
 2.04 Intr - 107129 106999  131  1  2    2   69   108 0.217   0.64
 2.03 Intr - 108227 107984  244  0  1  -11   87   144 0.343   0.96
 2.02 Intr - 116057 115903  155  1  2   98   92   168 0.764  17.92
 2.01 Init - 118957 118902   56  1  2   73   94    35 0.394   3.36
 2.00 Prom - 122709 122670   40                              -5.66

 3.00 Prom + 127950 127989   40                              -6.26
 3.01 Init + 131840 131891   52  1  1   36  115    23 0.440   1.12
 3.02 Intr + 138689 138788  100  0  1  105   87    32 0.724   3.97
 3.03 Intr + 143611 143818  208  1  1  101   93   171 0.830  17.98
 3.04 Intr + 146406 146619  214  2  1  117   98   -17 0.848   0.49
 3.05 Intr + 158469 158620  152  1  2  101  105   163 0.994  19.18
 3.06 Intr + 163763 163886  124  1  1  113   88    94 0.952  12.06
 3.07 Term + 167532 167626   95  1  2   84   49   102 0.901   3.89
 3.08 PlyA + 167686 167691    6                               1.05

 4.00 Prom + 191146 191185   40                              -6.16
 4.01 Init + 198946 199116  171  0  0  108  115   336 0.972  35.74
 4.02 Intr + 203330 203551  222  1  0  108   64   479 0.910  45.82
 4.03 Intr + 205636 205745  110  0  2   64   75   158 0.994  11.18
 4.04 Intr + 206071 206179  109  1  1   81   45    65 0.469   1.79
 4.05 Intr + 206313 206421  109  2  1   38   90    82 0.474   3.26
 4.06 Intr + 207120 207797  678  1  0   94  110   228 0.940  17.19
 4.07 Term + 208008 208129  122  1  2  107   49    34 0.945   0.04
 4.08 PlyA + 208996 209001    6                               1.05

 5.07 PlyA - 210548 210543    6                               1.05
 5.06 Term - 213159 213088   72  0  0  118   37    52 0.638   1.01
 5.05 Intr - 214299 214224   76  2  1  101   99    31 0.639   5.02
 5.04 Intr - 214658 214591   68  2  2   69   77    76 0.821   2.30
 5.03 Intr - 214879 214832   48  1  0  107   98    80 0.998   9.78
 5.02 Intr - 215241 215128  114  0  0   81   80    23 0.694   1.44
 5.01 Intr - 216981 216837  145  2  1  101   77   129 0.598  13.38

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:36755816_36974772|GENSCAN_predicted_peptide_1|534_aa
MEQPEDMASLSEFDSLAGSIPATKVEITVSCRLGTGAIFPDFRESSSDLNNVDSVSRKRV
GNVCWMGKRGIYGAIWKSFVWEQLREAEDGKQDTGETEALRDGVSTCGIWTAAIRDIIGG
SLAATWINMASGALLQTYTARLGTEPKELPFYTPGQGNLLDKDMFSKSDPLCVMYTQGME
NKQWREFMETMLNYDLAFSILVMPLGPGSAVVLTDTGDKELNGMEYCVPPLEIFSQIDFS
FLIDLWVVFLPSLMGYKLGLTGPGGFSDFKIQVLAFFPFVIRPSNEGYKTSSFGRTEVID
NTLNPDFVRKFIVDYFFEEKQNLRFDLYDVDSKSPDLSKHDFLGQAFCTLGEIVGSPGSR
LEKPLTIGAFSLNSRTGKPMPAVSNGGVPGKKCGTIILSAEELSNCRDVATMQFCANKLD
KKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMKNTLNPVWQTFSIPVRALCNGDYDRTIK
VEVYDWDRDGSHDFIGEFTTSYRELARGQSQFNIYEVVNPKKKMKKKKYVNSGT

>gi568815592r:36755816_36974772|GENSCAN_predicted_CDS_1|1602_bp
atggagcagcctgaggacatggcgtcgctgagcgagttcgactccttggcgggcagcatc
ccggccaccaaggtggagatcaccgtgtcctgcagactagggacaggggccatcttcccg
gatttcagggagtcgtcatcagatctaaacaatgtggattctgtcagcaggaagagagtg
ggcaatgtttgctggatgggcaaacgtggcatctatggggccatttggaaatcgtttgtt
tgggagcagctccgagaggctgaggatgggaagcaggacacgggggaaactgaggcccta
agagacggtgtctcaacatgtggtatttggacggctgccatcagagacataataggggga
tctctggcggccacttggataaacatggcctctggagccctgcttcagacctacacagcc
agacttggaacagagcccaaggaactgccattttataccccggggcaggggaacctcctg
gacaaagacatgttttccaagtccgacccactgtgcgtcatgtatacccaagggatggag
aacaagcagtggcgggagtttatggagaccatgttgaattacgatcttgcattcagcatc
ttggttatgcctcttggtcctgggtcagctgtagtcctcaccgacacaggtgacaaggaa
ttgaatgggatggagtactgcgttcctccactagagatcttttcccagattgacttcagt
tttttaattgacctttgggttgtgttcctgccatcattaatggggtataaattgggcctg
acaggacctggtggcttctcagattttaaaatccaagttttagcatttttcccctttgtt
attcgtccaagtaatgaaggctataaaacatcttcatttgggcgcaccgaagtcatcgac
aacacgctcaatcctgacttcgtgcgcaagttcattgtggattactttttcgaggagaag
cagaacctccgttttgatctatacgacgttgactctaagagtcctgatttatccaaacac
gatttcctgggccaggccttctgcacccttggagagattgtggggtcccctgggagccgc
ctggaaaagcccctcacgataggcgcattcagcctgaattccaggacgggcaaacccatg
ccagctgtgtccaacggtggtgtcccaggaaagaaatgtggcaccatcatcctgtccgct
gaggagctcagcaactgtagggatgtcgccaccatgcagttctgtgccaacaagctggac
aagaaagatttctttgggaaatctgaccccttcttggtattctacagaagcaacgaggat
ggaacgttcaccatttgccacaagaccgaggtcatgaagaacaccctaaatccagtctgg
caaactttctccattcccgtgagagccctctgcaacggcgactacgatcggaccatcaag
gtggaggtgtacgactgggatcgggacggcagccatgacttcattggggagttcaccacc
agttaccgggagctggcccgtgggcagagccaattcaacatctatgaggtggtaaacccg
aaaaagaaaatgaagaaaaagaaatacgtgaattctggcaca

>gi568815592r:36755816_36974772|GENSCAN_predicted_peptide_2|291_aa
MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDF
MIQGGDPTGTANTKIEVYWVTPVKDKGSGNQVWKGRSSHSSAGLSNTCESRGAEEEQLPV
SSEEHQENVESWKPKEDSNSSRRVTSSVDQVKTGIQTSLTPKASEKEKTASSEPQSPLED
CGIVPVWYINKVFVSGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVT
LAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPSG

>gi568815592r:36755816_36974772|GENSCAN_predicted_CDS_2|876_bp
atggcggcaattcccccagattcctggcagccacccaacgtttacttggagaccagcatg
ggaatcattgtgctggagctgtactggaagcatgctccaaagacctgtaagaactttgct
gagttggctcgtcgaggttactacaatggcacaaaattccacagaattatcaaagacttc
atgatccaaggaggtgacccaacagggacagcaaacaccaagatagaggtttattgggta
acacctgtgaaagataaagggtcagggaaccaggtttggaagggaaggtcttcacacagc
agcgcaggcctgagtaacacctgtgaaagcagaggggcggaggaggagcagctgccagtg
agcagcgaggaacaccaggagaatgtggagtcgtggaagccaaaggaagacagcaactca
agcagaagggtgacatcgagtgtggatcaagtaaaaactggaatccagacgtctctgacc
ccaaaggcaagtgagaaagagaagacagcatcttcagaaccacaaagccccttggaggac
tgtggcattgttcccgtctggtatattaacaaagtgtttgtgtcaggtcgaggtggtgca
tctatctatggcaaacagtttgaagatgaacttcatccagacttgaaattcacgggggct
ggaattctcgcaatggccaatgcggggccagataccaatggcagccagttctttgtgacc
ctcgcccccacccagtggcttgacggcaaacacaccatttttggccgagtgtgtcagggc
ataggaatggtgaatcgcgtgggaatggtagaaacaaactcccaggaccgccctgtggac
gacgtgaagatcattaaggcatacccttctgggtag

>gi568815592r:36755816_36974772|GENSCAN_predicted_peptide_3|314_aa
MGNETEQVGSDQIIKGHGIIVVNHFPVLSRSVVIKGHVVSELPAQNRKITWDFILEDMDL
AANEISIYDKLSETVDLVRQTGHQCGMSEKAIEKFIRQLLEKNEPQRPPPQYPLLIVVYK
VLATLGLILLTAYFVIQPFSPLAPEPVLSGAHTWRSLIHHIRLMSLPIAKKYMSENKGVP
LHGGDEDRPFPDFDPWWTNDCEQNESEPIPANCTGCAQKHLKVMLLEDAPRKFERLHPLV
IKMHKMPDLFIIGSGEAMLQLIPPFQCRRHCQSVAMPIEPGDIGYVDTTHWKVYVIARGV
QPLVICDGTAFSEL

>gi568815592r:36755816_36974772|GENSCAN_predicted_CDS_3|945_bp
atgggaaatgaaactgaacaggtaggcagtgaccagatcataaagggccatggaatcatt
gtagtcaatcattttccagttctcagccgctcagttgtgatcaagggacacgtggtttcc
gaactgccagctcagaataggaaaataacttgggattttatattggaagacatggatctt
gctgccaacgagatcagcatttatgacaaactttcagagactgttgatttggtgagacag
accggccatcagtgtggcatgtcagagaaggcaattgaaaaatttatcagacagctgctg
gaaaagaatgaacctcagagaccccccccgcagtatcctctccttatagttgtgtataag
gttctcgcaaccttgggattaatcttgctcactgcctactttgtgattcaacctttcagc
ccattagcacctgagccagtgctttctggagctcacacctggcgctcactcatccatcac
attaggctgatgtccttgcccattgccaagaagtacatgtcagaaaataagggagttcct
ctgcatgggggtgatgaagacagaccctttccagactttgacccctggtggacaaacgac
tgtgagcagaatgagtcagagcccattcctgccaactgcactggctgtgcccagaaacac
ctgaaggtgatgctcctggaagacgccccaaggaaatttgagaggctccatccactggtg
atcaagatgcataagatgcctgacctatttatcattggcagcggtgaggccatgttgcag
ctcatccctcccttccagtgccgaagacattgtcagtctgtggccatgccaatagagcca
ggggatatcggctatgtcgacaccacccactggaaggtctacgttatagccagaggggtc
cagcctttggtcatctgcgatggaaccgctttctcagaactgtag

>gi568815592r:36755816_36974772|GENSCAN_predicted_peptide_4|506_aa
MHGSCSFLMLLLPLLLLLVATTGPVGALTDEEKRLMVELHNLYRAQVSPTASDMLHMRWD
EELAAFAKAYARQCVWGHNKERGRRGENLFAITDEGMDVPLAMEEWHHEREHYNLSAATC
SPGQMCGHYTQVVWAKTERIGCGSHFCEKLQGVEETNIELLVCNYEPPGNVKGKRPYQEG
TPCSQCPSGYHCKNSLCGESTGGWPPTRSHFGALSFQVAGFQPFKGRMLESLAASGGPAR
EPIGSPEDAQDLPYLVTEAPSFRATEASDSRKMGTPSSLATGIPAFLVTEVSGSLATKAL
PAVETQAPTSLATKDPPSMATEAPPCVTTEVPSILAAHSLPSLDEEPVTFPKSTHVPIPK
SADKVTDKTKVPSRSPENSLDPKMSLTGARELLPHAQEEAEAEAELPPSSEVLASVFPAQ
DKPGELQATLDHTGHTSSKSLPNFPNTSATANATGGRALALQSSLPGAEGPDKPSVVSGL
NSGPGHVWGPLLGLLLLPPLVLAGIF

>gi568815592r:36755816_36974772|GENSCAN_predicted_CDS_4|1521_bp
atgcacggctcctgcagtttcctgatgcttctgctgccgctactgctactgctggtggcc
accacaggccccgttggagccctcacagatgaggagaaacgtttgatggtggagctgcac
aacctctaccgggcccaggtatccccgacggcctcagacatgctgcacatgagatgggac
gaggagctggccgccttcgccaaggcctacgcacggcagtgcgtgtggggccacaacaag
gagcgcgggcgccgcggcgagaatctgttcgccatcacagacgagggcatggacgtgccg
ctggccatggaggagtggcaccacgagcgtgagcactacaacctcagcgccgccacctgc
agcccaggccagatgtgcggccactacacgcaggtggtatgggccaagacagagaggatc
ggctgtggttcccacttctgtgagaagctccagggtgttgaggagaccaacatcgaatta
ctggtgtgcaactatgagcctccggggaacgtgaaggggaaacggccctaccaggagggg
actccgtgctcccaatgtccctctggctaccactgcaagaactccctctgtggtgagtcc
acgggtggatggccccccacgcgcagccactttggcgccctgtcgttccaagtggccgga
tttcaacccttcaaagggaggatgttagaaagtctggcggcttcgggggggcccgcgcga
gaacccatcggaagcccggaagatgctcaggatttgccttacctggtaactgaggcccca
tccttccgggcgactgaagcatcagactctaggaaaatgggtactccttcttccctagca
acggggattccggctttcttggtaacagaggtctcaggctccctggcaaccaaggctctg
cctgctgtggaaacccaggccccaacttccttagcaacgaaagacccgccctccatggca
acagaggctccaccttgcgtaacaactgaggtcccttccattttggcagctcacagcctg
ccctccttggatgaggagccagttaccttccccaaatcgacccatgttcctatcccaaaa
tcagcagacaaagtgacagacaaaacaaaagtgccctctaggagcccagagaactctctg
gaccccaagatgtccctgacaggggcaagggaactcctaccccatgcccaggaggaggct
gaggctgaggctgagttgcctccttccagtgaggtcttggcctcagtttttccagcccag
gacaagccaggtgagctgcaggccacactggaccacacggggcacacctcctccaagtcc
ctgcccaatttccccaatacctctgccaccgctaatgccacgggtgggcgtgccctggct
ctgcagtcgtccttgccaggtgcagagggccctgacaagcctagcgtcgtgtcagggctg
aactcgggccctggtcatgtgtggggccctctcctgggactactgctcctgcctcctctg
gtgttggctggaatcttctga

>gi568815592r:36755816_36974772|GENSCAN_predicted_peptide_5|174_aa
XGLIPHLLGDVVFLWGCNLLAHFINAYLVDDSVSDTPGGLGNDQNPGSQARIRLWVSGCM
SVLALTACQALDVDQADTGSALEAHSPFSQALAIRSYTKFVMGIAVSMLTYPFLLVGDLM
AVNNCGLQAGLPPYSPVFKSWIHCWKYLSVQGQLFRGSSLLFRRVSSGSCFALE

>gi568815592r:36755816_36974772|GENSCAN_predicted_CDS_5|525_bp
nntggattaatccctcacctcctgggcgatgtggttttcttgtggggctgtaacctgctg
gcccacttcatcaatgcctacctggtggatgacagcgtgagtgacaccccaggggggctg
ggaaacgaccagaatccaggttcccaggccaggattcgtctttgggtttcagggtgcatg
tctgtcttagcactgactgcgtgccaagccctggatgttgatcaggcagacacgggctca
gcccttgaggctcacagtccgttcagccaggccctggccatccggagctataccaagttc
gtgatggggattgcagtgagcatgctgacctaccccttcctgctagttggcgacctcatg
gctgtgaacaactgcgggctgcaagctgggctccccccttactccccagtgttcaaatcc
tggattcactgctggaagtacctgagtgtgcagggccagctcttccgaggctccagcctg
cttttccgccgggtgtcatcaggatcatgctttgccctggagtaa