GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:44:49

Sequence gi568815584f:35192477_35417303 : 224827 bp : 44.16% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1050   1045    6                               1.05
 1.02 Term -  26778  26675  104  1  2   81   45    86 0.625   2.04
 1.01 Init -  29329  29242   88  1  1   89   40    73 0.674   3.40
 1.00 Prom -  36560  36521   40                              -4.76

 2.05 PlyA -  36853  36848    6                               1.05
 2.04 Term -  43083  42788  296  1  2   49   50   264 0.556  14.17
 2.03 Intr -  49372  49246  127  1  1   71  105    -2 0.439   0.05
 2.02 Intr -  49562  49506   57  2  0  106   70    13 0.268   0.38
 2.01 Init -  52702  52700    3  1  0   81  101     0 0.372   0.60
 2.00 Prom -  54905  54866   40                              -3.36

 3.00 Prom +  62278  62317   40                              -2.86
 3.01 Init +  73046  73114   69  1  0   74   37    35 0.505  -1.95
 3.02 Intr +  74251  74399  149  0  2   81  103   106 0.773  10.43
 3.03 Intr +  77982  78120  139  0  1   57   95   103 0.820   8.37
 3.04 Intr +  99858  99947   90  2  0   39   54   125 0.009   4.39
 3.05 Intr + 116438 116519   82  1  1   83   91    26 0.896   1.61
 3.06 Intr + 118264 118419  156  2  0   43   81   141 0.981   8.88
 3.07 Intr + 120405 120583  179  1  2  118  100    49 0.992   8.74
 3.08 Intr + 121885 121979   95  0  2   78  109    38 0.949   3.66
 3.09 Intr + 139476 139557   82  0  1   79   23    55 0.059  -2.26
 3.10 Intr + 140078 140147   70  1  1   77   78    67 0.133   3.35
 3.11 Intr + 146970 147053   84  1  0   67   67    55 0.494   1.09
 3.12 Intr + 148324 148422   99  2  0  113   80   -11 0.286   0.68
 3.13 Intr + 149252 149289   38  0  2  125   66   -14 0.173  -1.92
 3.14 Term + 160239 160313   75  2  0   85   47   133 0.613   6.74
 3.15 PlyA + 164834 164839    6                               1.05

 4.00 Prom + 166522 166561   40                              -4.26
 4.01 Init + 175378 175438   61  0  1   51   76    83 0.904   4.83
 4.02 Term + 176822 177108  287  0  2   36   42   213 0.840   7.07
 4.03 PlyA + 178644 178649    6                               1.05

 5.04 PlyA - 182440 182435    6                               1.05
 5.03 Term - 195867 195645  223  2  1   41   41   306 0.411  17.59
 5.02 Intr - 196448 195869  580  0  1   39   20   500 0.378  30.06
 5.01 Init - 198347 198263   85  2  1   69  100    68 0.566   7.38
 5.00 Prom - 207564 207525   40                              -7.56

 6.08 PlyA - 208127 208122    6                               1.05
 6.07 Term - 209584 209537   48  1  0  107   53    58 0.853   1.50
 6.06 Intr - 210187 209918  270  1  0   76  105   304 0.895  28.64
 6.05 Intr - 210383 210295   89  0  2  105   77   115 0.916  11.79
 6.04 Intr - 210884 210674  211  2  1   91   80   146 0.992  12.59
 6.03 Intr - 211322 211214  109  1  1  132   85   216 0.999  25.99
 6.02 Intr - 212396 211942  455  2  2   87   99   613 0.657  54.36
 6.01 Init - 221263 221201   63  1  0   81   41    57 0.334   1.45

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 115518 115612   95  1  2   86   95    32 0.825   3.38
S.002 Term + 124773 124830   58  0  1  126   41    38 0.858   0.06


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:35192477_35417303|GENSCAN_predicted_peptide_1|63_aa
MTVIFKNEENMVLEYQNNRSEKGHDHGRPVAFLAGSGLGNTSGRRLYGEPYWLGVPYLIT
GQE

>gi568815584f:35192477_35417303|GENSCAN_predicted_CDS_1|192_bp
atgactgtgattttcaaaaacgaagagaatatggttcttgaataccagaacaaccgctca
gaaaaggggcatgaccatgggaggccagtcgcattcctggcaggcagtggactgggaaac
accagtggtcgcagactgtatggagaaccttactggctgggcgtgccctatctgatcaca
ggacaggagtaa

>gi568815584f:35192477_35417303|GENSCAN_predicted_peptide_2|160_aa
MVLPEARVDIRVNKTWSLPSIKESANAKAQMSEMLRYVERITRILGPVECTVQGGREEKL
RRGVNTITTLEENKKAQLVVTAHEVDPIKLVVFLLALCHKMGVPYCIIKGKARLGHLVHR
KTCTTVNFTQVNSEDKDTLAKLVEAIRTNYNDRYDEIRHH

>gi568815584f:35192477_35417303|GENSCAN_predicted_CDS_2|483_bp
atggtactacctgaagcacgggtggatataagggtaaacaagacatggtccctgccctca
attaaagaatcagcaaatgcaaaggcacaaatgagtgaaatgttacggtatgttgagaga
ataacaagaattttaggaccagtggagtgtacagtgcagggtgggagagaagaaaagctg
aggagaggagttaacaccatcaccaccttggaggagaacaagaaggctcagctggtggtg
actgcacatgaagtggatcccatcaagctagttgtcttcctgcttgccttgtgtcataaa
atgggggtcccttactgcattatcaaggggaaggcaagactgggacatctagtccacagg
aagacctgcaccactgtcaactttacacaggttaactcggaagacaaagacactttggct
aagctggtggaagctatcaggaccaattacaatgacagatatgatgaaatccgccatcac
tag

>gi568815584f:35192477_35417303|GENSCAN_predicted_peptide_3|468_aa
MKWRPVGSGENGDKVTDWKVGYRLLNVVSQLAKRNLRLLVLGRKHMLRRSSQWSRDEMEE
VQKQASCFFADDMFITRDLMRDHKACLPDAKTQRLFFKWQQGHQLAIVNRFPGSKLTFQS
REFGMQERKKRGWYPGSSRCNFREVLVCLDKLLDSSTVTHLFKITENIGCVMTGMTADSR
SQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQG
PQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSI
DFKPSEIEVGVVTVENPKFRACGSSTGPCCSPLSLRGLSHIQRYEGNELIQVLIKREGKK
LSVKMAVLAFWFLLEYSSLSTDCIAISYNCLEAKDLGTGAGNTGVSHRGGHEKGLEIPFW
KSKIHVNYVRAEFTTQEARPAGWEAFVESTKDKHSLAVKPVGACMLRT

>gi568815584f:35192477_35417303|GENSCAN_predicted_CDS_3|1407_bp
atgaagtggaggccagtgggaagtggagagaatggggataaagtaactgactggaaagta
ggctacaggctcttgaatgtcgtctctcaactagccaaacggaatctgcgactgctggtc
ctaggccggaagcacatgctaagacggagttcccagtggagtcgggatgagatggaagag
gtgcaaaagcaagccagctgtttttttgctgatgacatgtttatcacaagagacctgatg
cgggaccacaaggcctgtctgcctgatgccaagacccaacgcctgttttttaagtggcag
cagggacatcagctggcaattgtaaataggtttccaggatcaaaactaacctttcagagc
cgtgagttcggcatgcaagagcggaagaaacgcggctggtaccccggaagcagtcgctgc
aacttccgggaggtgcttgtgtgcctggacaaattattggattccagcacagtgactcac
ttattcaagataactgaaaacattggttgtgtgatgaccggaatgacagctgacagcaga
tcccaggtacagagggcacgctatgaggcagctaactggaaatacaagtatggctatgag
attcctgtggacatgctgtgtaaaagaattgccgatatttctcaggtctacacacagaat
gctgaaatgaggcctcttggttgttgtatgattttaattggtatagatgaagagcaaggc
cctcaggtatataagtgtgatcctgcaggttactactgtgggtttaaagccactgcagcg
ggagttaaacaaactgagtcaaccagcttccttgaaaaaaaagtgaagaagaaatttgat
tggacatttgaacagacagtggaaactgcaattacatgcctgtctactgttctatcaatt
gatttcaaaccttcagaaatagaagttggagtagtgacagttgaaaatcctaaattcagg
gcttgtggcagctccaccgggccctgctgcagccccttgtcattgagaggcctctcccac
atccagagatacgaggggaatgaacttatacaagtcctcatcaagagggagggcaaaaaa
ttgtcggtgaagatggctgtgctggcattttggtttcttctggaatattcatctttgtcc
actgactgcatcgccataagctataactgcttagaggccaaggacttaggcacaggtgct
gggaatacaggcgtgagccaccgcggcggccatgaaaagggcttggagattcctttctgg
aaatctaaaatccatgtgaattatgttagggcagagttcaccacacaggaggcaaggcca
gcgggctgggaggcctttgtggagagcaccaaggacaagcatagcctggctgttaaaccc
gtgggcgcctgcatgctacgcacctga

>gi568815584f:35192477_35417303|GENSCAN_predicted_peptide_4|115_aa
MGPLISPGTFPYIRLQLEAFALTLVAAPRWALAFVNGSFIKLSPNTHGMRVTADSFLPVT
PAMCTKSISDPLLTPPDPVKKASMNATLHAGVSGPARSQLSGFEGTDGPGVWQCE

>gi568815584f:35192477_35417303|GENSCAN_predicted_CDS_4|348_bp
atggggccccttatctcccccggcactttcccctacatccggctgcaactagaagctttc
gcactaaccctcgtggctgccccacgctgggccctggcctttgtaaacggttcctttatt
aaactctctccaaatacccacggcatgcgtgtgacagcggactccttcctgcccgtcaca
ccggcgatgtgcacaaaaagtatctcagaccctctcctcaccccacctgatcccgtcaaa
aaggcctccatgaacgccaccctccatgctggggtctcggggcctgcaagatcccagctc
agtggatttgaaggaactgatgggcctggagtctggcagtgtgaatga

>gi568815584f:35192477_35417303|GENSCAN_predicted_peptide_5|295_aa
MKRRAVMGPPQVQAWKALDLWESSQVMEGKAVVPMGRNPMMRKATQGQLENSPALEKLLP
PLQGNVGFAFTKEDLTEVRDLLLANKVPAATRAGAIGPCEVTVPAQNTGLGPEKISFFQA
LGITTKISRGTTEILSDVQLIKTGDRVGASEATLLNTPNISPFSFGLVIQQVFNNGSIYN
PEVLDITEETLYSGFLEGVRNVASVSANWLPTCCISTPFYHHGYKGCLALSVETDYTFPP
AEKIKTFLADPSAFVAAAPVATTATAAPAAAAAPTKFENEESEELDEDMGFGLFD

>gi568815584f:35192477_35417303|GENSCAN_predicted_CDS_5|888_bp
atgaaacggagggctgtcatgggcccaccccaggtgcaagcctggaaggccctggacctc
tgggagtcctctcaagtcatggaagggaaggccgtggtgccaatgggcaggaaccccatg
atgcgcaaggccacccaaggacaactggaaaacagcccagctctggagaaactgttgcct
cctctgcaggggaatgtgggctttgcgttcaccaaggaggacctcactgaggtcagggat
ctgctgctggccaataaggtgccagctgccacccgtgctggtgccattggcccatgtgaa
gtcactgtaccagcccagaacactggtctgggacccgagaagatttcttttttccaggct
ttaggcattaccactaaaatctccaggggcaccactgaaatcctgagtgatgtgcagctg
atcaagactggagacagagtgggagccagcgaagccacactgctgaacacgccgaacatc
tctcccttctcctttgggctggtcatccagcaggtgttcaacaatggtagtatctacaac
cctgaagtgcttgacatcacagaagaaactctgtattctggcttcctggagggtgtccgc
aatgttgccagtgtgtctgcaaactggctacccacctgttgcatcagtacccccttctat
catcatgggtacaaaggatgcctggctctatctgtggagactgattacaccttcccgcct
gctgaaaagatcaagaccttcttggctgatccatctgcctttgtggctgctgcccctgtg
gccactaccgccacggctgctcctgctgctgcggcagccccaactaagtttgaaaacgag
gagtcggaggagttggatgaggatatgggatttggtctctttgactaa

>gi568815584f:35192477_35417303|GENSCAN_predicted_peptide_6|414_aa
MVQLSPHYRGDSEDGRKRMVRQRTKPVLFFWSDWLGNSPSLTPPQRNPQPAFIGRRGGAA
EPTAVRAAVPPASAPARKQRAARGPAHPQQRPQLVRAMFQAAERPQEWAMEGPRDGLKKE
RLLDDRHDSGLDSMKDEEYEQMVKELQEIRLEPQEVPRGSEPWKQQLTEDGDSFLHLAII
HEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFR
GNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLV
SLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPST
RIQQQLGQLTLENLQMLPESEDEESYDTESEFTEFTEDELPYDDCVFGGQRLTL

>gi568815584f:35192477_35417303|GENSCAN_predicted_CDS_6|1245_bp
atggtacaactcagcccgcactaccgtggggacagtgaagatggaaggaagaggatggtc
cggcagaggacgaagccagttctctttttctggtctgactggcttggaaattccccgagc
ctgaccccgccccagagaaatccccagccagcgtttatagggcgccgcggcggcgctgca
gagcccacagcagtccgtgccgccgtcccgcccgccagcgccccagcgaggaagcagcgc
gcagcccgcggcccagcgcacccgcagcagcgcccgcagctcgtccgcgccatgttccag
gcggccgagcgcccccaggagtgggccatggagggcccccgcgacgggctgaagaaggag
cggctactggacgaccgccacgacagcggcctggactccatgaaagacgaggagtacgag
cagatggtcaaggagctgcaggagatccgcctcgagccgcaggaggtgccgcgcggctcg
gagccctggaagcagcagctcaccgaggacggggactcgttcctgcacttggccatcatc
catgaagaaaaggcactgaccatggaagtgatccgccaggtgaagggagacctggccttc
ctcaacttccagaacaacctgcagcagactccactccacttggctgtgatcaccaaccag
ccagaaattgctgaggcacttctgggagctggctgtgatcctgagctccgagactttcga
ggaaatacccccctacaccttgcctgtgagcagggctgcctggccagcgtgggagtcctg
actcagtcctgcaccaccccgcacctccactccatcctgaaggctaccaactacaatggc
cacacgtgtctacacttagcctctatccatggctacctgggcatcgtggagcttttggtg
tccttgggtgctgatgtcaatgctcaggagccctgtaatggccggactgcccttcacctc
gcagtggacctgcaaaatcctgacctggtgtcactcctgttgaagtgtggggctgatgtc
aacagagttacctaccagggctattctccctaccagctcacctggggccgcccaagcacc
cggatacagcagcagctgggccagctgacactagaaaaccttcagatgctgccagagagt
gaggatgaggagagctatgacacagagtcagagttcacggagttcacagaggacgagctg
ccctatgatgactgtgtgtttggaggccagcgtctgacgttatga